mRNA_L-elsbetiae_contig6883.15643.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6883.15643.1 vs. uniprot
Match: D7FZM3_ECTSI (HABP4_PAI-RBP1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZM3_ECTSI) HSP 1 Score: 240 bits (612), Expect = 1.680e-65 Identity = 215/322 (66.77%), Postives = 230/322 (71.43%), Query Frame = 3 Query: 108 GREMKKSGGGGRNWGNDAAAGMDNAAAGAENDGEGPAG-NWGANG-VAPNAEGGSKWNAEAAAAEGAEGXXXXXXXGESPKDDTPAPPXXXXXXXEIQLTLDEHQAVLDAKARELADIIGDVSIKTVDESEFQEGAIRNKQEVEEEGYMGGKAGAKARKQKTQ-RTHEVFKDVGFRAPAMNSGGDGXXXXXXXXXDGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEDGGPPRPRFQGGGGRGG--FRGEGRGGYHGXXXXXXXXXXXXXXYRPEARTGAPLNLKDDEAFPSL 1058 GRE+KKSGGGGRNWGNDAAAGMDNAAA AEN+ EG G WGANG APNAE + A +G GESPK+DTPAP EIQLTLDEHQA+LDAKA+ELAD+IG+VSIKTVD+SEF +GAIRNKQ+VEEEG+MGGKA K RK KTQ R EVF+DVGFRAPAMNSGGDG R XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX EDGGPPRPRF GGGG G FRGEGRG Y GXXXXXXXXX YR +ART APLNLKDDEAFPSL Sbjct: 197 GREIKKSGGGGRNWGNDAAAGMDNAAANAENEAEGDQGAGWGANGSAAPNAEDPMTETGDGQATDG----------GESPKEDTPAPRVPEPEPEEIQLTLDEHQAMLDAKAKELADMIGEVSIKTVDDSEFNDGAIRNKQDVEEEGFMGGKA-TKTRKVKTQQRAKEVFQDVGFRAPAMNSGGDG-------------RGXXXXXXXXXXXXXXXXXXFDRGDRPQRSGYXXXXXXXXXXXXXXXXEGDESTPAEDGGPPRPRFHGGGGGRGXXFRGEGRG-YQGXXXXXXXXX-----YRGDARTSAPLNLKDDEAFPSL 488 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6883.15643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6883.15643.1 >prot_L-elsbetiae_contig6883.15643.1 ID=prot_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp MKKSGGGGRNWGNDAAAGMDNAAAGAENDGEGPAGNWGANGVAPNAEGGSback to top mRNA from alignment at L-elsbetiae_contig6883:2102..9471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6883.15643.1 ID=mRNA_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7370bp|location=Sequence derived from alignment at L-elsbetiae_contig6883:2102..9471+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6883:2102..9471+ >mRNA_L-elsbetiae_contig6883.15643.1 ID=mRNA_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1890bp|location=Sequence derived from alignment at L-elsbetiae_contig6883:2102..9471+ (Laminarionema elsbetiae ELsaHSoW15)back to top |