mRNA_L-elsbetiae_contig6883.15643.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6883.15643.1
Unique NamemRNA_L-elsbetiae_contig6883.15643.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6883.15643.1 vs. uniprot
Match: D7FZM3_ECTSI (HABP4_PAI-RBP1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZM3_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 1.680e-65
Identity = 215/322 (66.77%), Postives = 230/322 (71.43%), Query Frame = 3
Query:  108 GREMKKSGGGGRNWGNDAAAGMDNAAAGAENDGEGPAG-NWGANG-VAPNAEGGSKWNAEAAAAEGAEGXXXXXXXGESPKDDTPAPPXXXXXXXEIQLTLDEHQAVLDAKARELADIIGDVSIKTVDESEFQEGAIRNKQEVEEEGYMGGKAGAKARKQKTQ-RTHEVFKDVGFRAPAMNSGGDGXXXXXXXXXDGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEDGGPPRPRFQGGGGRGG--FRGEGRGGYHGXXXXXXXXXXXXXXYRPEARTGAPLNLKDDEAFPSL 1058
            GRE+KKSGGGGRNWGNDAAAGMDNAAA AEN+ EG  G  WGANG  APNAE       +  A +G          GESPK+DTPAP        EIQLTLDEHQA+LDAKA+ELAD+IG+VSIKTVD+SEF +GAIRNKQ+VEEEG+MGGKA  K RK KTQ R  EVF+DVGFRAPAMNSGGDG             R XXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXX        EDGGPPRPRF GGGG  G  FRGEGRG Y GXXXXXXXXX     YR +ART APLNLKDDEAFPSL
Sbjct:  197 GREIKKSGGGGRNWGNDAAAGMDNAAANAENEAEGDQGAGWGANGSAAPNAEDPMTETGDGQATDG----------GESPKEDTPAPRVPEPEPEEIQLTLDEHQAMLDAKAKELADMIGEVSIKTVDDSEFNDGAIRNKQDVEEEGFMGGKA-TKTRKVKTQQRAKEVFQDVGFRAPAMNSGGDG-------------RGXXXXXXXXXXXXXXXXXXFDRGDRPQRSGYXXXXXXXXXXXXXXXXEGDESTPAEDGGPPRPRFHGGGGGRGXXFRGEGRG-YQGXXXXXXXXX-----YRGDARTSAPLNLKDDEAFPSL 488          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6883.15643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZM3_ECTSI1.680e-6566.77HABP4_PAI-RBP1 domain-containing protein n=2 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6883contigL-elsbetiae_contig6883:2102..9471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size3460
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6883.15643.1prot_L-elsbetiae_contig6883.15643.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6883 2670..7072 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.7822313-UTR-L-elsbetiae_contig6883:2101..22071622816761.7822313-UTR-L-elsbetiae_contig6883:2101..2207Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 2102..2207 +
1691683793.896663-UTR-L-elsbetiae_contig6883:2101..22071691683793.896663-UTR-L-elsbetiae_contig6883:2101..2207Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 2102..2207 +
1622816761.798528-UTR-L-elsbetiae_contig6883:2659..26691622816761.798528-UTR-L-elsbetiae_contig6883:2659..2669Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 2660..2669 +
1691683793.9065762-UTR-L-elsbetiae_contig6883:2659..26691691683793.9065762-UTR-L-elsbetiae_contig6883:2659..2669Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 2660..2669 +
1622816761.8910947-UTR-L-elsbetiae_contig6883:7072..94711622816761.8910947-UTR-L-elsbetiae_contig6883:7072..9471Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 7073..9471 +
1691683793.9903226-UTR-L-elsbetiae_contig6883:7072..94711691683793.9903226-UTR-L-elsbetiae_contig6883:7072..9471Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6883 7073..9471 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816761.8102188-CDS-L-elsbetiae_contig6883:2669..28101622816761.8102188-CDS-L-elsbetiae_contig6883:2669..2810Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 2670..2810 +
1691683793.915467-CDS-L-elsbetiae_contig6883:2669..28101691683793.915467-CDS-L-elsbetiae_contig6883:2669..2810Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 2670..2810 +
1622816761.8222394-CDS-L-elsbetiae_contig6883:3527..36591622816761.8222394-CDS-L-elsbetiae_contig6883:3527..3659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 3528..3659 +
1691683793.9320855-CDS-L-elsbetiae_contig6883:3527..36591691683793.9320855-CDS-L-elsbetiae_contig6883:3527..3659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 3528..3659 +
1622816761.8348713-CDS-L-elsbetiae_contig6883:4191..43591622816761.8348713-CDS-L-elsbetiae_contig6883:4191..4359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 4192..4359 +
1691683793.942696-CDS-L-elsbetiae_contig6883:4191..43591691683793.942696-CDS-L-elsbetiae_contig6883:4191..4359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 4192..4359 +
1622816761.8460345-CDS-L-elsbetiae_contig6883:4875..49611622816761.8460345-CDS-L-elsbetiae_contig6883:4875..4961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 4876..4961 +
1691683793.9532657-CDS-L-elsbetiae_contig6883:4875..49611691683793.9532657-CDS-L-elsbetiae_contig6883:4875..4961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 4876..4961 +
1622816761.8576703-CDS-L-elsbetiae_contig6883:5852..60411622816761.8576703-CDS-L-elsbetiae_contig6883:5852..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 5853..6041 +
1691683793.963046-CDS-L-elsbetiae_contig6883:5852..60411691683793.963046-CDS-L-elsbetiae_contig6883:5852..6041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 5853..6041 +
1622816761.8692305-CDS-L-elsbetiae_contig6883:6306..64821622816761.8692305-CDS-L-elsbetiae_contig6883:6306..6482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 6307..6482 +
1691683793.9718351-CDS-L-elsbetiae_contig6883:6306..64821691683793.9718351-CDS-L-elsbetiae_contig6883:6306..6482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 6307..6482 +
1622816761.880321-CDS-L-elsbetiae_contig6883:7019..70721622816761.880321-CDS-L-elsbetiae_contig6883:7019..7072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 7020..7072 +
1691683793.9808323-CDS-L-elsbetiae_contig6883:7019..70721691683793.9808323-CDS-L-elsbetiae_contig6883:7019..7072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6883 7020..7072 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6883.15643.1

>prot_L-elsbetiae_contig6883.15643.1 ID=prot_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp
MKKSGGGGRNWGNDAAAGMDNAAAGAENDGEGPAGNWGANGVAPNAEGGS
KWNAEAAAAEGAEGEAAAADGGESPKDDTPAPPKPEPEPEEIQLTLDEHQ
AVLDAKARELADIIGDVSIKTVDESEFQEGAIRNKQEVEEEGYMGGKAGA
KARKQKTQRTHEVFKDVGFRAPAMNSGGDGRGRGRGRGRDGGGRGGRGGG
GRGFDRGDRPQRPNYGGEGGEAGEGPRGGNWRGGGGGGRGGEDGGDGNKE
DGGPPRPRFQGGGGRGGFRGEGRGGYHGGGGGGGGGGGGGGGYRPEARTG
APLNLKDDEAFPSL*
back to top

mRNA from alignment at L-elsbetiae_contig6883:2102..9471+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6883.15643.1 ID=mRNA_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7370bp|location=Sequence derived from alignment at L-elsbetiae_contig6883:2102..9471+ (Laminarionema elsbetiae ELsaHSoW15)
GTGGCTACGGCGAGAGGGACAACCGCGACAACAGGGCCAGCAGGAGCGGC TACGCCGGGCGCGACGGCCGCAACCGCGAGTACGACAGGCGCTCTGGCAC TGGCAGGTTAGTTTTAGCAATGTCGCACCCGTCGAGAGATTATCTCATGT ACATCCACAACAGTGGGGCAGACGACGAATAAGCCAACAGTGGGAAACAA AACACCAAAAACGATCTAGGAATGTTTGTGAAGCATATGGCTGCTGTTGT ACCGCGAGATAGTTGTTTTATCGGGGAGTTTGTGTCTTTCAGAGACTTTG GTCAAGAACCAATGCACCGCGGCGGCAAGCAGGCGGCGCGGGTTATGTAT CCTCCACCGTTTTGTCAAGAGTTTGCGGTGCCCCCTTGCGGGTGACGATT CGGGCACAATGCTTAAGGTATATACATGGATCAAAGCACAGAACACCCAT CCATCCCCATGGGATGTGTGCGCTCCCTGTTCAATAGTTTTCTGTTCCAT GGACGGCGCTCTTGTTCTCACTGCTGTTGCCATGATGTCACGGTGATGCA ACTGCCAGGGGCCGTGAGATGAAGAAGAGCGGCGGAGGCGGGCGCAACTG GGGCAACGACGCGGCCGCCGGCATGGACAACGCCGCCGCCGGCGCCGAGA ACGACGGAGAAGGACCCGCGGGCAACTGGGGAGCCAACGGTGTCGCCCCC AACGCCGAGGTGGGTCTCGTTGCCGTGTTGATGTCAAATGCTTTTTCTCA TTGTAGTACATAAGAGTGTTTAGTTTTGCACTTTTCGCCCGGCCAGTATG TAGGTCATTGTTTGCGTGCGCTGGTGTTGAGGCAATGTTTTGTTGAGGGC TGCGCCTGGTAAAAATAAAAATAGAAATAAAAATAGGTAATAGAGGCGTT CGTGTGTTAGTCGGTGCCATGCTCGGTTTTGGTGGCATTTTGTGGTTTGT GTGTTGACATCTTGTCCAACCAAGCGTTGGGTTGTTGCTGTGTTTGAAAG CGTTGACGTCGACTCCGCCACAACTTTGAGGCTGTTTTGCGAGATGCGGC GTTGTATACGTGTACCTTACGTGAAGCAACTCGCCTCAACGTCTGCTGTT CTTTGTACTGTCTGTCGTATAGTGGCCCCCGTGTTTGGCCTGTCCAATCA GACTCCCCTACCTTCCCAGGGTACATATACCTTGTGCACGTTGTTTTTGT CCCTTTTTTTCTCTCTGGCGTTGACCTCAGGACCTCAATATACCCCCCCC CCGAAGCCGTGCTCCGTTTGTTCGCTGATGACGGCAGAACCGTGGGGCAG CGAGCGCAACAAGCACCATTTTGTTTTTACCAACAGAGATCCCGCGCCTG TTTCAAACGTTTCGATAACAATGTACCCCCCCTCATCCTCCATGTCTTGC TGTCTTTTGCTTGCTTTGAATCGAAGGGAGGATCCAAGTGGAACGCTGAG GCCGCCGCCGCCGAGGGTGCCGAGGGCGAGGCGGCTGCCGCCGACGGAGG AGAGTCGCCCAAGGACGACACGCCCGCCCCGCCCAAGCCTGAGCCCGAGC CGGAAGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTATGTTTTTTTTTTTCTCTTCTCATTAACTCTCATTATTGGCTTGTTCG TCATCTGCCCCACTGGCCCCCTTCCTCCACTATGTGTGTGTGCGTGTGTG TGGTTCATTAATAAACATCTTGTCGATTCGATGCACTTTTTCGCGATGAT GTGCCCATTCCAAAGAAGGCAAGGGACGCGGGGGGATTATTTTCTCTTCC TCATCTGTTTCGTGTACCACCTCGAATATCTTCCAAGAATCCTCCCCCGC CCTCTCTCTACCTTTTTCGATCACTTTCGAGATAATTATAATGATGACGG GTAGATCCAGCTGACCTTCTCAACGACCCTTTCCCCCCTCCTCCCGTTTT CTTGCAGCCATGTTGGATGGCGATGGTGATGAGGATGTTGAGCAGATCCA GCTGACTCTTTCAGCGACCCCCTTCCCTCGCCCTCTCTTCGTTTTCCGTC CGCTCTTGATGATGATGACGATTATGATGGTGCTCCTTAGATCCAGCTGA CCCTGGACGAGCACCAGGCTGTGCTCGACGCCAAGGCCAGGGAGCTCGCC GACATCATCGGAGACGTGTCCATCAAGACCGTCGACGAATCGGAGTTTCA AGAGGGCGCAATCCGCAACAAGCAAGAAGTCGAAGAGGAGGGCTACATGG GAGGCAAGGTGAGAGCCACGGCCAGGTGCGACGTTGGGATGTTGCGGCTG CCTTCCGTAACATGGCCACCACATACACAGTGTACATAAGACATATGTAT GCAGAGGTATAAGGACCGCAAGGACGGGGGGGGGATAATATTTTGCTACA TTTACTTGGTGGCGTTCAATTAGAAGCGGGCTTCGTACACAAAGCCAGGG TGAGGCACAGGAACGCAAGGACAAGGAGACTGTGGGATACTGTTGTAGTC GAGTTTGGGCGGTCATCAACACGGGCTGTTGCGTAGGCCTTCTCTCCAAA ATGATGAGAAAAGGTGATGCGGGAGTCCCATACATTTTTATATTTTCGAC ATTTTAAATTTGGTTTACGGCCATGAGACCTCTGACCGTAATGTGCCTGG TGGATGTCCTTTATCGCATGACATCCTACCCAAGCTGGTGCTGGCGCATA TCATCTGTTTTTAACCTTCTTTCCGCACCCGACGTGGCATGCTCGTTTCG CGTGTTTTTTCTATTAATCCACAGGCGGGGGCCAAGGCCCGTAAGCAGAA GACCCAGCGCACCCACGAGGTGTTCAAGGACGTGGGCTTCAGGGCGCCCG CCATGAACTCGTGAGTGCATGCAATGTCTCGCCGTCCATGTTTTTTCTTA TTCATTTTTTCACATTTATTTTCAGTGCTCGATGGGCTCCTTGCCACGAG GGCATCTTGCCAGAGTACTGGACCGTGGTCACACCAAAGGATGCCTTTCC CCGTCGCCGCCGTTCCTCCCCTCTGCGGTGCGGTGCCTACGTTTGTTCAG AGGAGAAGGGTTCAGCCGTCGCTTTCCTTCGTCGACATGATAACCGTATA CCATGTCATGGAAAGTTTGGGGCTTTCTCGGCTGAACTCCTAAGCAAGAA ATGGCGATCCATGATCTTCTGTGCGACATGATACCATGTACAGCAGCAGT TGTTGCACCCAGAGCCCAGCAGCATTATCTTGCACGTACATTAAATACCT TGTGTGTGCTCTCTGTTTCAATGAGAAGAGGAAAATGGCTTGTGCCACTA TTCGGACACACGAACGTACTCCTGAGCACCACTGTTGCGTGCGCTTCTTC AAGTGTCTCGTCACGATTCGTGTTTTTGAAATGTCCTGGTTTCTATATTC CTGCCGCACAGTTCATTTTGTTTGAGTTTCACAGTATTTTCTTTTTCTAT TTCGTGGTACGATACTTTTTTTCTTCGAAACACCCGGAAAAAACGAAAAA ACCACTCACTAAAATGAGCTGAAGCATGGACCATGGTGGTGCGTTTCGAA ATACGAAGATGGCGGCGTGCACGAAGTACATGGTGAGCACACCTTTTTCG AGCCCTGTTGAGCCTTGAAAAAAAGAAAACACACTTGCGATACTTTTTTA AAATTCAACGAACTTTTTCACCCTCGCTCTCTTTTGTTCCTTCGAATTCT ACATTGGATGTGACACTTGTACAAACATACATACGATGCCGCCACCATCA GCGGCGGCGACGGACGCGGGCGCGGGCGCGGTCGTGGGCGCGACGGCGGC GGCCGCGGAGGCAGGGGCGGCGGTGGCCGAGGCTTCGACCGCGGTGACCG TCCCCAGCGCCCCAACTACGGCGGTGAAGGCGGAGAGGCCGGCGAGGGCC CCCGCGGCGGCAACTGGCGCGGCGGCGGTGGCGGCGGAAGGTGAACTGAC CAAGCCAACCAACCTATTGCTGTGTGCGGTGGTGCACATTTTGTTTTCTC TCCTTTCTGAAGAGTTGACGTTGGTCCGGTCCATGTACGGTGTAGCCGTG ACAGCTCTGCTTTTGCGACCACGTATGCCCGATTGCCGTACGTGACACAC CTCCGATACGGCGTCTGGTTCCCCGGCCCGGCTCACTTTTCATCGGCCCC TGAACGCCTCCCAACTTGCCGCACTCTTACAACATCGCTGAACTCGAAAC GACAGGGGAGGAGAAGATGGCGGCGATGGCAACAAGGAAGATGGCGGCCC TCCCAGGCCCCGTTTCCAGGGTGGCGGTGGCCGCGGCGGATTCCGCGGTG AGGGCCGCGGTGGCTACCACGGCGGCGGTGGCGGCGGTGGCGGCGGCGGC GGAGGCGGCGGCGGCTACAGGCCCGAAGCTCGTGAGTAATGTCATATTAG CCTGCGTCTGTGGCGATAGGCTTTTCCCTGCTGATTCCTGCGGACACTTG AATCAATCCATCCTGCTGTTGTGAGTTCGCCTGTGTAGTTAGATGTGCCA GCGTGTAGTGTCACGTCTCTTTTCGAGTTGCTGATTTGTTGGTGTGATGG GTCAGTTCGTTGGTGATGGTGTGTCTTGGCAAGATGCGGCAGCTCATTGG TGGCGCCAGATGGGCGTTTACCTGAAGACTTGAAGGCGGCCTTGCCCATA TGGCGACCCAGCCGTGCGGTCCTAGGTACACCGTATAAACTGTAAAATTT ACTCAACCTCCCCCCCCCTCCCCTTAATCAGCCCAATCTTTCAACCTTAA CGCTCAAGATATTCCTTAACAGGCACACTCAAGTCTGATGACCACGGTCA ATAGTCCAGCCCAAAACCTACACGCCACGGTTCCCGCCCCCCCTCACCTT CCCTCCCGTCTGTTGCCCCCGTCTTGTCTCTGTTGTTGTCCCAACCCTGA CAAAAACACCTAATATAGGCACGGGCGCCCCCCTGAACCTCAAGGACGAT GAGGCTTTCCCGTCCCTCTAAGAGCAAAACTCGATGAGAAATCCACTCCG GTTGGGACCACGCTGAGCCAAGGAAGTGGCCGTGTTGTGCCTTGCCGCCG TCTTCCCTCGCTCTCCATCCTGAACTATTCGAGTGGGAGCGGGTTTCCTT TCCTGGTCATGTAGTGGGGACTTCAATGCCAGTTTGCTGGGACGGGGCAG TTTGCGCCGAATGTCTCGCGACGTCGTGATCGGTGTTTTGCTTGTTTAGC TGTCTTGCCCCTTTGAAATTCTAAGTCGGATTGAAGTGCTCTTCAGAGAG AACTTGTGTGCACGACCTACGGAGACCTCGAGTATTGTGTCGCGTCCTGT TGATGGGGGTGTTGTTGGTTGGTCCAGGGCCGCCGGTTGCTGTGAAGCCA CTGGCGATGGTGTTTTGGACAGCAATTATCGGAGCATCTTTTGGTGCAGT TTATGGTCGTGATGGTGAAGAGCGAGTGGGAAGGAAGGTGGGAGGGAGAA CACCGCGTGTGGGTGCGTGCGTCCAACCATCAAAATATATAGGATCCTTG AAAATGGGGTGTTTTGATTGGTGGGTCTAAAGGGCGGTCTTTTAGTAGGT TAACCCTTGAATGCGGGGGGGAAGGAGAGAAGAGGTGAGCATGCGCGCGC GCGTACCGAGGAAGCCCAGGCTATCATACACTACTGCTGTTTTATTCTGA AAGCAGCTTTTAGGCTTTTCAGGTGATCCTTTTGGGTGGTGGTGGCGGTG GTATCGGCTGTCATGCCCGGCCTACGAGGGGGAGAAGGGGGAAGGGATAG CCAGGGCGGCGGGTAGGCGATATCTAGCAGACTGGGGACCTCTGGGCGAT GCTTGGTCTTCGTCCAGAAACAGGGGTGGAATAAAAGTCTGCTGACGCCT TTTTATCGAGGTGCTGCAAAACACTTTGGTGTGTCCGTTTTTTTTAGGAG GTGCTGTCGCCTCTTGTTGACGGCGATGTCGTCACGTTTTCTGTTTTTCC TTGAAGGGAGGATGACGTTATGTGTGCAGGGGGTAGACAACTGCGCTCAG CAGTCTTGTGTGGTATCATTTTGTCTGGGGGGGGGGGGGTTCATAGGGGC AGCAGGACAGTGTGAAGTGTCCCTGGGGGTAGCAAAATGAGGCCGAAAGT ATAGAGCATTGCGATGAGACGCGATGCGCGGTATTTGTCGGCGCGTGATG TGATCGATGCAAGGAGCTCCGCCACTTCGCGAGATATGTTTCGCGTTGCG CGACAGCAGTGCAGCCTTATCTGGCGAAGTAGCGGTTAAGCTTTTTATTG TTGTCTGTGCAACAGTAGGCGGGTTGAGTTGACCACCGCTGGACAAACCA AACTTATCGCGTCATCGAGTCAGCAGTGCTTGCCGAGCGGGGTTAGGTGA GCTTGAAGCGTGAACGATAGCTGTGCAACGACCACCCGGCGCGCCGCTGG TCTCGCTCCTGTGCAACCGATGTTCTTGGCGGCACTGTCGCCATCCACGT CTTTGATGCGCGCCCTGTGGCGCATCTCGCTATCAATTATTTTGGAAGAC GATATCTGTCTTTTGTCTGCAGGAAAAGGTGGAGGGGATTTACGTAGCAG TAGAAGTAGTGGCAGGGGTGGATTCAGAAGCGAACGGCTTTGCTGGTGGG TATTGGTGCGTATCGCCATATAAAGACCCGCTACTACTTAATTATAGACT CAAAGATAGCAGTGTTGACGAGACAGGAACCAGCCGTGTTTGATTATGAC GCAGCTGGTTTAGAGCGAGAAGTAGTAGGTGATGAGTCGGTGACGCGAAA GGGTTAAACAAGCCACCTTATCCTTGTGTAATCCCCGGGTTGCTGCTGTA GTAAAGTTTTTTGGTTACCCTTACCCTGGACAGCCTTTTGGGAAGTCGGT CCTTGCTAACTGCTGTTGTTGTGTTGGCCGCCGCTAGGCGGTCTTCGCAC AGTACGTCTGGGCACGGTTGCTCACTAGTTGGTTTGCCCGTCCTGGCTTA CACCACTAGAGGGGCAGAAATCTAGATCAGTGTGTGGTACGGAAGGTATG ACGGTTATATTGTAGTTGATTTTGCTGGGCCTTCGTGCTACGGTGTTTGT TTTACCTGTACTTGACGTCTAACGGATGATGATGCGCAATAAGACGGTTT ATTTTGTTCTCGCAAGAACCGCTGCGTTTTCGTTGCGACACAACACTCGC GTGTTTCATATAACCTACATGAACCATATATACAAGGTCTTTTGGCGGCT TACACCGCCATTCAAAGTGTGAGCGAGTCTCAAATGCACCGATGCTGATT GATGAGTCGGTGTGCTTGCGGTTTTGCATGGTGGTTCTGTCTATGCATGG GCGTGGTTGTAGTTGTTGTTCACATTATACATGGCTCGTAAATCGAGACT GCTAATTCCAAAAATCTAGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6883:2102..9471+

>mRNA_L-elsbetiae_contig6883.15643.1 ID=mRNA_L-elsbetiae_contig6883.15643.1|Name=mRNA_L-elsbetiae_contig6883.15643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1890bp|location=Sequence derived from alignment at L-elsbetiae_contig6883:2102..9471+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAAGAGCGGCGGAGGCGGGCGCAACTGGGGCAACGACGCGGCCGC
CGGCATGGACAACGCCGCCGCCGGCGCCGAGAACGACGGAGAAGGACCCG
CGGGCAACTGGGGAGCCAACGGTGTCGCCCCCAACGCCGAGATGAAGAAG
AGCGGCGGAGGCGGGCGCAACTGGGGCAACGACGCGGCCGCCGGCATGGA
CAACGCCGCCGCCGGCGCCGAGAACGACGGAGAAGGACCCGCGGGCAACT
GGGGAGCCAACGGTGTCGCCCCCAACGCCGAGGGAGGATCCAAGTGGAAC
GCTGAGGCCGCCGCCGCCGAGGGTGCCGAGGGCGAGGCGGCTGCCGCCGA
CGGAGGAGAGTCGCCCAAGGACGACACGCCCGCCCCGCCCAAGCCTGAGC
CCGAGCCGGAAGAGGGAGGATCCAAGTGGAACGCTGAGGCCGCCGCCGCC
GAGGGTGCCGAGGGCGAGGCGGCTGCCGCCGACGGAGGAGAGTCGCCCAA
GGACGACACGCCCGCCCCGCCCAAGCCTGAGCCCGAGCCGGAAGAGATCC
AGCTGACCCTGGACGAGCACCAGGCTGTGCTCGACGCCAAGGCCAGGGAG
CTCGCCGACATCATCGGAGACGTGTCCATCAAGACCGTCGACGAATCGGA
GTTTCAAGAGGGCGCAATCCGCAACAAGCAAGAAGTCGAAGAGGAGGGCT
ACATGGGAGGCAAGATCCAGCTGACCCTGGACGAGCACCAGGCTGTGCTC
GACGCCAAGGCCAGGGAGCTCGCCGACATCATCGGAGACGTGTCCATCAA
GACCGTCGACGAATCGGAGTTTCAAGAGGGCGCAATCCGCAACAAGCAAG
AAGTCGAAGAGGAGGGCTACATGGGAGGCAAGGCGGGGGCCAAGGCCCGT
AAGCAGAAGACCCAGCGCACCCACGAGGTGTTCAAGGACGTGGGCTTCAG
GGCGCCCGCCATGAACTCGCGGGGGCCAAGGCCCGTAAGCAGAAGACCCA
GCGCACCCACGAGGTGTTCAAGGACGTGGGCTTCAGGGCGCCCGCCATGA
ACTCCGGCGGCGACGGACGCGGGCGCGGGCGCGGTCGTGGGCGCGACGGC
GGCGGCCGCGGAGGCAGGGGCGGCGGTGGCCGAGGCTTCGACCGCGGTGA
CCGTCCCCAGCGCCCCAACTACGGCGGTGAAGGCGGAGAGGCCGGCGAGG
GCCCCCGCGGCGGCAACTGGCGCGGCGGCGGTGGCGGCGGAAGCGGCGGC
GACGGACGCGGGCGCGGGCGCGGTCGTGGGCGCGACGGCGGCGGCCGCGG
AGGCAGGGGCGGCGGTGGCCGAGGCTTCGACCGCGGTGACCGTCCCCAGC
GCCCCAACTACGGCGGTGAAGGCGGAGAGGCCGGCGAGGGCCCCCGCGGC
GGCAACTGGCGCGGCGGCGGTGGCGGCGGAAGGGGAGGAGAAGATGGCGG
CGATGGCAACAAGGAAGATGGCGGCCCTCCCAGGCCCCGTTTCCAGGGTG
GCGGTGGCCGCGGCGGATTCCGCGGTGAGGGCCGCGGTGGCTACCACGGC
GGCGGTGGCGGCGGTGGCGGCGGCGGCGGAGGCGGCGGCGGCTACAGGCC
CGAAGCTCGGGAGGAGAAGATGGCGGCGATGGCAACAAGGAAGATGGCGG
CCCTCCCAGGCCCCGTTTCCAGGGTGGCGGTGGCCGCGGCGGATTCCGCG
GTGAGGGCCGCGGTGGCTACCACGGCGGCGGTGGCGGCGGTGGCGGCGGC
GGCGGAGGCGGCGGCGGCTACAGGCCCGAAGCTCGCACGGGCGCCCCCCT
GAACCTCAAGGACGATGAGGCTTTCCCGTCCCTCTAAGCACGGGCGCCCC
CCTGAACCTCAAGGACGATGAGGCTTTCCCGTCCCTCTAA
back to top