mRNA_L-elsbetiae_contig6472.15151.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 3.230e-149 Identity = 253/349 (72.49%), Postives = 273/349 (78.22%), Query Frame = 1 Query: 1 SRCYWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQSAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEGLYTAATIALRSGCEATRRFLASTNASLAAAASTATEASRG-ECAWKLLGDLYTYAHKLPPMCFEGEGAREGHGQQGGEGYALGLGTKEAA-EHQA 1041 +RCYWEVG REDR YCFNSLLKAAKLDPSNAEAFEWLG+WYQ VGGDRERARGCF R + GAGEALA LYL GQETLAV LFRQ AAVSVACHWAWAGLGRTKILEGKLAEAASH+QQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAE+LLA++Q + SVE AARVRVRTQVGTIQRQIGQVDEAVSSF +AL PES LALEG+GEAYLAQAHARTSEGLY AA ALR+G +AT+RFL + A+ +S A+ ECAWKLLGDL+TYAHKLPPMCFE EG+RE G G LGLGT +AA EH A Sbjct: 532 ARCYWEVGGLYREDRKYCFNSLLKAAKLDPSNAEAFEWLGHWYQGVGGDRERARGCFLRXXXXXXXLTGAGEALASLYLHTGQETLAVALFRQCAAVSVACHWAWAGLGRTKILEGKLAEAASHVQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEDLLADQQDPPS-----------------SVEAAARVRVRTQVGTIQRQIGQVDEAVSSFNDALTRDPESILALEGSGEAYLAQAHARTSEGLYNAAAKALRNGRDATKRFLDLSKATTGKGSSGEGAAAVSMECAWKLLGDLHTYAHKLPPMCFEDEGSREQRGGSAEGGSVLGLGTSQAAVEHAA 863
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: A0A6H5JG00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG00_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 3.590e-134 Identity = 235/331 (71.00%), Postives = 253/331 (76.44%), Query Frame = 1 Query: 100 EAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQSAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEGLYTAATIALRSGCEATRRFL-----------------ASTNASLAAAASTATEASRGECAWKLLGDLYTYAHKLPPMCFEGEGAREGHGQQGGEGYALGLGTKEAAEHQA 1041 +AFEWLGYWYQ VGGDRERARGCF R+VKLDP++ GAGEALA LYL GQETLAV LFRQ AAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAE+LLA++Q + SVE AARVRVRTQVGTIQRQIGQVDEAVSSF +ALAL PES LALEG+GEAYLAQAHARTSEGLYTAA ALR+G +AT+RFL A+ + +AAA+TA ECAWKLLGDL TYAHKLPPMCFE EG+RE G G L LGT AA QA Sbjct: 31 KAFEWLGYWYQGVGGDRERARGCFLRSVKLDPALPGAGEALASLYLHTGQETLAVALFRQCAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEDLLADQQDPPS-----------------SVEAAARVRVRTQVGTIQRQIGQVDEAVSSFNDALALDPESILALEGSGEAYLAQAHARTSEGLYTAAAKALRNGRDATKRFLDLAKATTGNARSGEGAGAAPSGGRSAAAATALSM---ECAWKLLGDLQTYAHKLPPMCFENEGSRERRGGSAEGGSVLVLGTSRAAVEQA 341
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: A0A836CP95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP95_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.350e-51 Identity = 136/361 (37.67%), Postives = 165/361 (45.71%), Query Frame = 1 Query: 4 RCYWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAV--------------GLFRQSAAVSVACHWAWAGLGRTKILEGKLAEA----------------------------ASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEGLYTAATIALRSGCEATRRFLASTNASLAAAASTATEASR----GECAWKLLGDLYTYAHKLPPMCF 948 RC W +G R R CF +LL+AA+ DP A AF LG WY E GGD RARGC RA+KL AV GL +V WAW+ LGR + G+L EA A+H+QQA+ G P W W DLGW YH + KQAAALKAY RA ++ +E A D++ RA AA VR+ T G R+IGQVDEA + ALALAP +LA G +A LA+AHAR +EG AA LR G FL + + S + AWKLLGDL YAH+LPP CF Sbjct: 456 RCLWALGGARRSARDGCFAALLRAARADPGCALAFALLGRWYLEEGGDEARARGCLARALKLXXXXXXXXXXXXXXXXXXXXXXXAVAQCRAPPPQARSHHGLRPLVMRTAVQASWAWSALGRHYMGAGQLDEATAAASAXXXXXXXXXXXXXXXXXXXXXXAAHLQQALAGAPRDWRGWGDLGWVYHRQAKQAAALKAYARALAVM---------EEGADAASDDDAARA-----AAAVRILTDAGRAHREIGQVDEAAEALDRALALAPRDALARIGGAQAALARAHARATEGQNGAAADCLRRGAALAEAFLGAADGSGGSXXXXXXXXXXXXXXARTAWKLLGDLRVYAHRLPPGCF 802
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: A0A822FRJ0_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822FRJ0_9NEOB) HSP 1 Score: 115 bits (289), Expect = 1.080e-24 Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 10 YWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLY--LQNGQETLAVGLFRQSAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEEL 495 YW +G E R+DR+ N LKAA+LD + F +LG++Y++V GDR RARGC+++A +LD S +G A L L++ + LA+ A S A WAW G + G ++A + +Q A+R P + W LG Y + G ALK++TRA EL Sbjct: 464 YWLMGEETRKDRTKALNHFLKAARLDAHMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDSDAESGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASEL 627
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: H2XYI6_CIOIN (Uncharacterized protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=H2XYI6_CIOIN) HSP 1 Score: 115 bits (289), Expect = 1.140e-24 Identity = 82/252 (32.54%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 13 WEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQSAAVSV--ACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEG 762 WE+ E + D++ CF + LKAAKLDP +EAF ++G +YQ+V D RA CF +++ LD AG ALA LY++ AV ++ ++ S C W LG K+ + A Q A+R W LG Y G AALK++ +A EL QP + SV Q+ I++ +GQ EA+ + + L + P+ AL+G GE++L+ AH+ SEG Sbjct: 462 WEI-EEYKVDKTKCFTTFLKAAKLDPYESEAFYYIGLFYQDVIKDSTRAMKCFNKSIALDTFNEKAGLALADLYIKEENMAAAVEVYNSLSSSSTPGTCKLTWLRLGLCKLKLKETESAIKSFQAALRADANDHICWECLGEAYMQRGSHGAALKSFQKASEL----QPGSVF----------------SVH---------QMAAIKQLLGQFTEAIEVYHQVLEMKPDYVPALKGLGESHLSIAHSMLSEG 683
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: H2XVM3_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2XVM3_CIOIN) HSP 1 Score: 115 bits (289), Expect = 1.160e-24 Identity = 82/252 (32.54%), Postives = 122/252 (48.41%), Query Frame = 1 Query: 13 WEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQSAAVSV--ACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEG 762 WE+ E + D++ CF + LKAAKLDP +EAF ++G +YQ+V D RA CF +++ LD AG ALA LY++ AV ++ ++ S C W LG K+ + A Q A+R W LG Y G AALK++ +A EL QP + SV Q+ I++ +GQ EA+ + + L + P+ AL+G GE++L+ AH+ SEG Sbjct: 457 WEI-EEYKVDKTKCFTTFLKAAKLDPYESEAFYYIGLFYQDVIKDSTRAMKCFNKSIALDTFNEKAGLALADLYIKEENMAAAVEVYNSLSSSSTPGTCKLTWLRLGLCKLKLKETESAIKSFQAALRADANDHICWECLGEAYMQRGSHGAALKSFQKASEL----QPGSVF----------------SVH---------QMAAIKQLLGQFTEAIEVYHQVLEMKPDYVPALKGLGESHLSIAHSMLSEG 678
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: D3ZL50_RAT (Tetratricopeptide repeat domain 37 n=5 Tax=Rattus norvegicus TaxID=10116 RepID=D3ZL50_RAT) HSP 1 Score: 115 bits (289), Expect = 1.200e-24 Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 10 YWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLY--LQNGQETLAVGLFRQSAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEEL 495 YW +G E R+DR+ N LKAA+LD + F +LG++Y++V GDR RARGC+++A +LD S +G A L L++ + LA+ A S A WAW G + G ++A + +Q A+R P + W LG Y + G ALK++TRA EL Sbjct: 464 YWLMGEETRKDRTKALNHFLKAARLDAHMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDSDAESGAAAVDLSVELEDTETALAILTAVTQKASSGAAKWAWLRRGLYYLKAGHHSQAVADLQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFTRASEL 627
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: A0A7M4E7J6_CROPO (Tetratricopeptide repeat domain 37 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4E7J6_CROPO) HSP 1 Score: 115 bits (287), Expect = 2.190e-24 Identity = 77/254 (30.31%), Postives = 122/254 (48.03%), Query Frame = 1 Query: 10 YWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQ--SAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEGL 765 YW +G E R+D++ + LKAAKLD F +LG++Y++V GD+ RARGC+++A +L+ S AG A L ++ G A+ + A + A WAW G + + ++A + +Q A+R P + W LG Y + G ALK++T+A EL E S+ AA I + +G+ EA++ + + L + E AL+G GE YL A A ++ L Sbjct: 426 YWSMGEETRKDKTKALSQFLKAAKLDSYMGSVFCYLGHYYRDVAGDKNRARGCYKKAFELNQSDGEAGSAAVDLSMELGDTETAIAVLTSVTEKASAGAAKWAWIRRGLYYLRANQHSQAVADLQAALRADPKDSNCWESLGEAYLSRGGYTTALKSFTKASELNPES--------------------VYSIYQAA---------VIDQLLGRYKEAIAEYQKILKKSKEYVSALKGLGECYLMVARAALADYL 650
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: UPI001E1DE5C3 (tetratricopeptide repeat protein 37 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1DE5C3) HSP 1 Score: 114 bits (284), Expect = 5.370e-24 Identity = 78/248 (31.45%), Postives = 119/248 (47.98%), Query Frame = 1 Query: 10 YWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLY--LQNGQETLAVGLFRQSAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHA 747 YW +G E R+D++ F LKAA+LDP + F +LG +Y++V GD+ RARGC+++A +LD + +G A L L+ + LAV A + WAW G + G+ A+A + +Q A+R P ++ W LG Y + G ALK++ RA EL E S +V IQ+ +G+ EAVS + + + AL+G GE +L+ A A Sbjct: 417 YWSMGEETRKDKTKAFTHFLKAARLDPYMGKVFCYLGRYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVELEEMETALAVLTAVTQKASAGTAKWAWLRRGLYYLKAGQHAQAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFIRASELNPESTYSVF-----------------------------KVAAIQQILGKYKEAVSQYQLIIKKNEDYVPALKGLGECHLSMARA 635
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Match: A0A151PI05_ALLMI (Tetratricopeptide repeat protein 37 n=11 Tax=Crocodylia TaxID=1294634 RepID=A0A151PI05_ALLMI) HSP 1 Score: 113 bits (283), Expect = 7.350e-24 Identity = 76/254 (29.92%), Postives = 121/254 (47.64%), Query Frame = 1 Query: 10 YWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRERARGCFQRAVKLDPSMRGAGEALALLYLQNGQETLAVGLFRQ--SAAVSVACHWAWAGLGRTKILEGKLAEAASHIQQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEELLAEEQPSTTADEDEGCAKDEEDTRAKSVEHAARVRVRTQVGTIQRQIGQVDEAVSSFTEALALAPESSLALEGAGEAYLAQAHARTSEGL 765 YW +G E R+D++ + LKAAKLD F +LG++Y++V GD+ RARGC+++A +L+ S AG L ++ G A+ + A + A WAW G + + ++A + +Q A+R P + W LG Y + G ALK++T+A EL E S+ AA I + +G+ EA++ + + L + E AL+G GE YL A A ++ L Sbjct: 481 YWSMGEETRKDKTKALSQFLKAAKLDSYMGSVFCYLGHYYRDVAGDKNRARGCYKKAFELNRSDGEAGSTAVDLSMELGDTETAIAILTSVTEKASAGAAKWAWIRRGLYYLRANQHSQAVADLQAALRADPKDSNCWESLGEAYLSRGGYTTALKSFTKASELNPES--------------------VYSIYQAA---------VIDQLLGRYKEAIAEYQKILKKSKEYVSALKGLGECYLMVARAALADYL 705 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6472.15151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6472.15151.1 >prot_L-elsbetiae_contig6472.15151.1 ID=prot_L-elsbetiae_contig6472.15151.1|Name=mRNA_L-elsbetiae_contig6472.15151.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp SRCYWEVGRECREDRSYCFNSLLKAAKLDPSNAEAFEWLGYWYQEVGGDRback to top mRNA from alignment at L-elsbetiae_contig6472:672..4440+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6472.15151.1 ID=mRNA_L-elsbetiae_contig6472.15151.1|Name=mRNA_L-elsbetiae_contig6472.15151.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3769bp|location=Sequence derived from alignment at L-elsbetiae_contig6472:672..4440+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6472:672..4440+ >mRNA_L-elsbetiae_contig6472.15151.1 ID=mRNA_L-elsbetiae_contig6472.15151.1|Name=mRNA_L-elsbetiae_contig6472.15151.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig6472:672..4440+ (Laminarionema elsbetiae ELsaHSoW15)back to top |