prot_L-elsbetiae_contig6470.15149.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6470.15149.1
Unique Nameprot_L-elsbetiae_contig6470.15149.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length243
Homology
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Match: A0A6H5KW71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW71_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.410e-6
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   10 CAHPGCSKGPSYGVAGTKKREFCSDHVEGGMVQMMNTS 47
            C H GC K P YGVAGTKKREFCS H + GMV ++N S
Sbjct:    4 CGHAGCPKQPKYGVAGTKKREFCSGHRKAGMVDVVNRS 41          
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.500e-5
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 MVNLKSNRKCAHPGCSKGPSYGVAGTKKREFCSDHVEGGMVQMMNT 46
            M+++   R C H GC K PSYG  G+KKREFC+ H + GMV M NT
Sbjct:    1 MIDVVCKR-CGHLGCMKRPSYGTDGSKKREFCAQHSQQGMVSMANT 45          
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 4.050e-5
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   10 CAHPGCSKGPSYGVAGTKKREFCSDHVEGGMVQMMNTSVVR 50
            C H  C+K P+YGVAG+KKREFCS H   GMV + N   ++
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRCIQ 44          
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Match: D8LD34_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD34_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.440e-5
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 MVNLKSNRKCAHPGCSKGPSYGVAGTKKREFCSDHVE 37
            MVN+ + + C HPGC+K PSYG +GTKK EFCS H E
Sbjct:    1 MVNVVT-KPCGHPGCTKKPSYGKSGTKKAEFCSQHAE 36          
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 6.350e-5
Identity = 22/36 (61.11%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   10 CAHPGCSKGPSYGVAGTKKREFCSDHVEGGMVQMMN 45
            C H  C+K P+YGVAG+KKREFCS H   GMV + N
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNN 99          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6470.15149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KW71_9PHAE2.410e-665.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G985_ECTSI1.500e-554.35EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FI73_ECTSI4.050e-553.66EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LD34_ECTSI5.440e-562.16EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE6.350e-561.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6470contigL-elsbetiae_contig6470:1271..1999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6470.15149.1mRNA_L-elsbetiae_contig6470.15149.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6470 1189..2869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6470.15149.1 ID=prot_L-elsbetiae_contig6470.15149.1|Name=mRNA_L-elsbetiae_contig6470.15149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
MVNLKSNRKCAHPGCSKGPSYGVAGTKKREFCSDHVEGGMVQMMNTSVVR
SGVDAGGGGSVAPLTRPSSLTNTGRGGAIGNSMSGGASNRKSRAIRPRAP
TSSPGVPRAAEELVGRSTVRPNSSVDHRSRTTAVVKVEGVELSSSIVAGD
GSVEEGAAAPRVGEGRNKRRRRAPTSVTPANSDAISLGKSSGSRTRGKRA
RHTEDNDVVVLEDNDQAAEAAAAAGETASRRPGASVAIKPEQ*
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