prot_L-elsbetiae_contig11720.1498.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig11720.1498.1
Unique Name	prot_L-elsbetiae_contig11720.1498.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	163

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig11720.1498.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 9.970e-8
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0

Query:   75 MMRALDRRSSCFARPEGWLARLGRRVQTPRREKQACPKAAVLR------ADKATVADIELLEMGRRLKSNFEWAVVTTVDMEEEGLFRHIVTYI 162
            MMRA   RSS  AR +GW ARL        R+ +   +A++++          T  +IELLE GR LK NF  AV+  V+++EEGLFRHI++Y+
Sbjct:    1 MMRARHERSSS-ARSKGWRARL--------RKLERYDEASIIKYAMRDFMGGQTPPEIELLEAGR-LKMNFVRAVIAVVEIQEEGLFRHIMSYL 84

[Close]

BLAST of mRNA_L-elsbetiae_contig11720.1498.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.740e-7
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 0

Query:   46 PGLFSRRRTSTQSVTTTGQLLWGRRGWLVMMRALDRRSSCFARPEGWLARLGRRVQTPRREKQACPKAAVLRADKATVADIELLEMGRRLKSNFEWAVVTTVDMEEEGLFRHIVTYI 162
            P   +R R   +  T  GQ  W   GWL+M+RA  +R    ARP+GW  RL        R+ +   +A ++        ++ELLE GR  + NF  AV   V++ EEGLFRHI++++
Sbjct:  192 PRQAARERAVERLRTFPGQRRWHAGGWLIMIRARHQRF--LARPKGWPIRL--------RKLERFNEANIVHK---IPPELELLEAGRS-RMNFVRAVTAVVEINEEGLFRHIISFL 294

[Close]

BLAST of mRNA_L-elsbetiae_contig11720.1498.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 4.020e-6
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 0

Query:   75 MMRALDRRSSCFARPEGWLARLGRRVQTPRREKQACPKAAVLR------ADKATVADIELLEMGRRLKSNFEWAVVTTVDMEEEGLFRHIVTYI 162
            MMRA  RR    AR +GW ARL        R+     +A +++          T  +IELLE GR LK NF  AV   +++ EEGLFRHI++Y+
Sbjct:    1 MMRA--RRQRSLARSKGWQARL--------RKLDHYDEANIMKYAMRDFMGSQTPPEIELLEAGR-LKMNFVRAVTAAIEIPEEGLFRHIISYL 83

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig11720.1498.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig11720.1498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LNB4_ECTSI	9.970e-8	42.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FME9_ECTSI	2.740e-7	35.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNC9_ECTSI	4.020e-6	40.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..162
None	No IPR available	TMHMM	TMhelix		coord: 5..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig11720	contig	L-elsbetiae_contig11720:2813..5129 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig11720.1498.1	mRNA_L-elsbetiae_contig11720.1498.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig11720 2566..5351 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig11720.1498.1 ID=prot_L-elsbetiae_contig11720.1498.1|Name=mRNA_L-elsbetiae_contig11720.1498.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
MWPLAMLVVALWPVDFVLTLRFGFRYVEKIKGRARTLVEQTREKFPGLFS
RRRTSTQSVTTTGQLLWGRRGWLVMMRALDRRSSCFARPEGWLARLGRRV
QTPRREKQACPKAAVLRADKATVADIELLEMGRRLKSNFEWAVVTTVDME
EEGLFRHIVTYI*