mRNA_L-elsbetiae_contig625.14848.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.240e-35 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S SC+V+ NFYGRLLFATI PLVVLGAL LTY V+RSRNRHSPAG+Q + K LS+ALF++F+VYSSVSF +FQTFVC+ LD+GV YLR Sbjct: 108 SASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLR 196
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.120e-34 Identity = 62/89 (69.66%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 SVSC+V++NFYGRL F T+ PLVV G L TY ++RSRNRHSPAG+QA +SK LS+ALF+ F+VYSSVSF +FQTFVC+ LD+GVTYLR Sbjct: 784 SVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLR 872
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 125 bits (313), Expect = 8.660e-33 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 SVSC+V+ NFYG FATI PLVV GA +TYTV++SRNRHSPAG+QA +SK LS+ LF++F+VYSSV F +FQTFVC+RLD G+ YLR Sbjct: 73 SVSCIVDSNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLR 161
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5JUB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB2_9PHAE) HSP 1 Score: 123 bits (309), Expect = 6.840e-31 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 1 Query: 10 CLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 C+V+ N+YGRLLFATI PLVVL AL LTY V+RSRNRHSPAG Q + K LS+ALF++F+VYS VSF +FQTFVC+ LD+GV YLR Sbjct: 434 CVVDSNYYGRLLFATIGPLVVLAALALTYAVSRSRNRHSPAGTQTAKHKHLSIALFIMFVVYSWVSFNIFQTFVCETLDDGVEYLR 519
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 106 bits (265), Expect = 6.430e-25 Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S SC+V +F+ RLL ATI P+VVL L LT+ V R RN S A ++AV++K LS ALFV+F +YSSVSF VFQTFVCD LD+GV+YLR Sbjct: 756 SYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLR 844
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 104 bits (260), Expect = 3.100e-24 Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S +C+ + NFY RLL ATI P++VLG LG TY VAR RNRH ++ V+ + LSV LFV+F++Y++VS+ +F+TFVCD LD+G +YLR Sbjct: 745 SFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLR 833
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 104 bits (259), Expect = 4.230e-24 Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S +C+ + NFY RLL ATI P++VLG LG TY VAR RNRH ++ V+ + LSV LFV+F++Y++VS+ +F+TFVCD LD+G +YLR Sbjct: 764 SFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLR 852
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.430e-23 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S CLV NFYGRL F+TI PL +LG L + +A+ NRHS G++ K LS+ALF++F +YSSVSF +FQTF+C+ LD+ V YLR Sbjct: 88 SFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLR 176
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.160e-23 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S C+V NFYGRL F+T+ PL +LG L T+ +A+ NRHS G++ K LS+ALF++F YSSVSF +FQTF+C+ LD+ V YLR Sbjct: 66 SFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLR 154
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 6.060e-22 Identity = 51/89 (57.30%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRSKLLSVALFVLFIVYSSVSFVVFQTFVCDRLDNGVTYLR 267 S C VNI+F+ R++ +T+ PLV L LGLTY VAR RNR S LQ VR K +S+AL V F+VYS VS +FQTF C+ LD+G TYLR Sbjct: 911 SAGCFVNIDFHDRVVTSTVGPLVALAILGLTYIVARCRNRSSDQALQNVRRKHVSMALLVSFLVYSPVSSTIFQTFSCETLDDGKTYLR 999 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig625.14848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig625.14848.1 >prot_L-elsbetiae_contig625.14848.1 ID=prot_L-elsbetiae_contig625.14848.1|Name=mRNA_L-elsbetiae_contig625.14848.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp SVSCLVNINFYGRLLFATISPLVVLGALGLTYTVARSRNRHSPAGLQAVRback to top mRNA from alignment at L-elsbetiae_contig625:22331..22794+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig625.14848.1 ID=mRNA_L-elsbetiae_contig625.14848.1|Name=mRNA_L-elsbetiae_contig625.14848.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=464bp|location=Sequence derived from alignment at L-elsbetiae_contig625:22331..22794+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig625:22331..22794+ >mRNA_L-elsbetiae_contig625.14848.1 ID=mRNA_L-elsbetiae_contig625.14848.1|Name=mRNA_L-elsbetiae_contig625.14848.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig625:22331..22794+ (Laminarionema elsbetiae ELsaHSoW15)back to top |