mRNA_L-elsbetiae_contig6108.14663.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6108.14663.1
Unique NamemRNA_L-elsbetiae_contig6108.14663.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A6H5JS05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS05_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 3.270e-128
Identity = 244/403 (60.55%), Postives = 277/403 (68.73%), Query Frame = 1
Query:    1 VAVLARGDN---DLERCRRLAQKLGVELVVPRREDDAEQRKEQEG---RGGRAVGSAAEGGHREIKFRMLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGD-------GGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYVVPP 1170
            VAVLA  D+   DL+RCR LA+KLG+ LVV R+E   E+ K+ +G   +G R  G AAE      KF M FD+ G LAL QPGSGFNPL+VDF GGKTGHRSKHQQG+TEQVVKAAALPK                 RR   +        P   DDD         PLPLLWDLTAGLGTD+FLLAQAGWRV+MFERSPVVA+LVQDALDRA  GDDETARTA SRM+LTVA+STE LA  ++ + ++ + +A      A+ G  RPDVVYLDPMFPQ R+ KK+KSALVKKGMQMLQALLEE D    R EG     GT  G        GGDV    E  +GV E   EERRLFD+AM+ ATRKVVVKRPVHG +IVRHV+PSHAVVSKNGRFDVYVVPP
Sbjct:  147 VAVLAAQDHSKEDLDRCRSLAEKLGLALVVARQEQGVEEEKQHQGERGKGKRLAGGAAEAERDGFKFTMFFDETGCLALGQPGSGFNPLLVDFCGGKTGHRSKHQQGRTEQVVKAAALPK-----------------RRAATTAADAALRPPSPGDDDA------KAPLPLLWDLTAGLGTDAFLLAQAGWRVKMFERSPVVAALVQDALDRARVGDDETARTATSRMSLTVADSTEVLA--KAVVGSSSSPSA--SVTSAAVGFSRPDVVYLDPMFPQQRKGKKKKSALVKKGMQMLQALLEEED----RAEGENMQQGTEIGGRIPDGAGGGDVTG--EGEAGVVENREEERRLFDIAMNFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 516          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: D7FPX8_ECTSI (SAM-dependent methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX8_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.060e-127
Identity = 246/400 (61.50%), Postives = 272/400 (68.00%), Query Frame = 1
Query:    1 VAVLARGD---NDLERCRRLAQKLGVELVVPRREDDAEQRKE---QEGRGGRAVGSAAEGGHREIKFRMLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLAT--FRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAG--RREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYVVPP 1170
            +AVLA  D    DLERCR LA+KLG+ LVV R+E           + G G    G AAE      KF MLFD+ GRLAL QPGSGFNPLVVDF GGKTG+RSKHQQGKTEQVVKAAALPK             T  +  P     SPG             +D+   PLPLLWDLTAGLGTD+FLLAQAGWRVEMFERS VVA+LVQDALDRA  GDDETAR AASRM+LTVA+STE LAT    S  S++  VA       A+ G  RPDVVYLDPMFPQ ++ KK+KSALVKKGMQMLQALLEE D   G  R++G E    T  G GG    G E  +G  EG  EERRLFD+AM  ATRKVVVKRPVHG +IVRHV+PSHAVVSKNGRFDVYVVPP
Sbjct:    1 MAVLAAQDYSKEDLERCRSLAEKLGLALVVARQEXXXXXXXXXXGERGEGEMLAGGAAEAEPDGFKFTMLFDETGRLALGQPGSGFNPLVVDFCGGKTGYRSKHQQGKTEQVVKAAALPKRRAA---------TAAADEPL-GPPSPG-------------DDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSSVVAALVQDALDRARVGDDETARKAASRMSLTVADSTEVLATAVVGSSSSSSAPVAR------AAVGFSRPDVVYLDPMFPQQKKGKKKKSALVKKGMQMLQALLEEEDGAEGEKRQQGTEPGGRTPDGAGGGDVSG-EGEAGAVEGQEEERRLFDIAMEFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 370          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A836C901_9STRA (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C901_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.380e-33
Identity = 112/330 (33.94%), Postives = 143/330 (43.33%), Query Frame = 1
Query:  181 FRMLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYVVPP 1170
            F + +D +G L L    +   PL VDF  GK G+R+  Q G  E VVKA                             +S G                   P PL+WDLTAGLG DSF++A AG RV MFERSPVVA+L+QDAL R  A  +  A+  ASRM L VA+S      F+                       RPDV  LDPMFP      K K ALVKK MQ+LQ+L ++                                +       +  +LF  A + A  KVVVKRP+ G  +V   KP+H++  ++ RFDVY   P
Sbjct:   40 FLLAYDAKGHLGLSDVSNSVQPLTVDFLEGKMGYRAAQQAG--ELVVKAV----------------------------RSSGK------------------PPPLVWDLTAGLGRDSFVMAGAGCRVVMFERSPVVAALLQDALVRLAAAPEADAQQVASRMQLHVADSCSLGDAFQLECE-------------------RPDVCLLDPMFPP-----KTKKALVKKDMQVLQSLFQQG-----------------------------VANSATNTDDDAAKLFATAAAFARSKVVVKRPIKGDTLVPVPKPTHSLRGRSNRFDVYAAGP 268          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A7S3XWK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWK9_HETAK)

HSP 1 Score: 124 bits (312), Expect = 6.340e-29
Identity = 104/326 (31.90%), Postives = 143/326 (43.87%), Query Frame = 1
Query:  181 FRMLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVY 1158
            + + F+ EG L +    + F+PL VDF+ GK G+R    +   EQ+ KA  L                K++R                               P++WD+TAGLG DSF+LA AG RV M ERSPV+ S++ D L+R    +D+ ++   S ++L++ +ST+         S   TV             P P VVYLDPMFP      K K AL KK MQ+LQ LL     +A + E                               EE  LF+VA+ L +R+VVVKRP  G  +     PS  +  K  RFDVY
Sbjct:   55 YSLQFNNEGALGIHCHTAKFSPLYVDFTSGKLGYRGCRPE--VEQIYKAVQL----------------KDTRT------------------------------PVVWDMTAGLGRDSFILACAGCRVHMLERSPVIGSILLDGLERLGKDEDQQSKEIRSLLSLSIGDSTKM-----QMASVINTV-------------PEPQVVYLDPMFPA-----KSKKALAKKDMQILQGLLGHGIDQAEKEE-------------------------------EEENLFNVALRLCSRRVVVKRPAKGPPLAGR-PPSFVLPGKTNRFDVY 277          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A1G8DB25_9VIBR (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Vibrio xiamenensis TaxID=861298 RepID=A0A1G8DB25_9VIBR)

HSP 1 Score: 110 bits (275), Expect = 6.060e-24
Identity = 103/315 (32.70%), Postives = 138/315 (43.81%), Query Frame = 1
Query:  217 LDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            LD+P  G   + VD  GG   HR K   GK + + KA  L K                                                LP + D TAGLG D+F+LA  G +V+M ER+PVVA+L+ D L+RA   D E     + RM+L  A S + LA+                ++ A T   RPDVVYLDPM+P P    K+KSALVKK M++ Q+L+  AD++A +                                     L   A+ LAT++VVVKRP +   +  H KPS A+ +K  RFDVYV
Sbjct:   47 LDEPKLG--AIYVDLVGGSVAHRRKFGGGKGQAIAKAVGLNKGA----------------------------------------------LPNVLDGTAGLGRDAFVLASLGCKVQMVERNPVVAALLDDGLERAKQ-DSEIGLWVSERMSLLHASSHDALASL--------------ADDSAFT---RPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQSLVG-ADLDADQ-------------------------------------LLQPALKLATKRVVVKRPDYANWLDEH-KPSMAIETKKNRFDVYV 254          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: RSMJ_VIBVY (Ribosomal RNA small subunit methyltransferase J n=45 Tax=Vibrio TaxID=662 RepID=RSMJ_VIBVY)

HSP 1 Score: 110 bits (274), Expect = 8.160e-24
Identity = 107/332 (32.23%), Postives = 141/332 (42.47%), Query Frame = 1
Query:  166 HREIKFRMLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            H      + F++     LD+P  G   + VD +GG   HR K   GK + + KAA L K                                             ATP  L  D TAGLG D+F+LA  G +V+M ER+PVVA+L+ D L RA   DDE     + RM+L  A S + LA   S                       PDVVYLDPM+P P    K+K+ALVKK M++ Q+L+  AD +A                                       L   A++LAT++VVVKRP + A  +  VKPS A+ +K  RFDVYV
Sbjct:   30 HSHFALVLTFERLELRKLDEPKLG--AIYVDLAGGAVAHRRKFGGGKGQAIAKAAGLNKG--------------------------------------------ATPTVL--DGTAGLGRDAFVLASLGCKVQMVERNPVVAALLDDGLTRAKK-DDEIGAWVSERMSLLHASSHDALAALASDAEFV-----------------HPDVVYLDPMYPHPEN--KKKTALVKKEMRVFQSLVG-ADTDADA-------------------------------------LLTPALALATKRVVVKRPDY-AEWLDGVKPSMAIETKKNRFDVYV 254          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A1M5ZIR1_9VIBR (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Vibrio aerogenes CECT 7868 TaxID=1216006 RepID=A0A1M5ZIR1_9VIBR)

HSP 1 Score: 110 bits (274), Expect = 8.900e-24
Identity = 102/315 (32.38%), Postives = 135/315 (42.86%), Query Frame = 1
Query:  217 LDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            LD+P  G  P+ VDF GG  GHR K   GK + + KA  L K                                                +P++ D TAGLG D+F+LA  G RV+M ER PVVA+L++D L RA   D+E       RM+L    S   L                  +  A    PRPDVVYLDPM+P P Q  K+KSALVKK M++ Q+L+                       GGD                +   L + A+ LA ++VVVKRP + A  + + KP+  + +K  RFDVYV
Sbjct:   47 LDEPKLG--PVYVDFVGGAVGHRRKFGGGKGQAIAKAVGLNKGA----------------------------------------------VPVVLDATAGLGRDAFVLASLGCRVQMIERHPVVAALLEDGLRRA-GSDEEIQAWVNERMSLIHCSSHTALY-----------------DHYADGNIPRPDVVYLDPMYPHPPQ--KKKSALVKKEMRVFQSLV-----------------------GGDQ---------------DADALLEPALMLAKKRVVVKRPDY-APWLDNQKPTMTIETKKNRFDVYV 254          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A2N8ZGX7_9VIBR (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Vibrio tapetis subsp. tapetis TaxID=1671868 RepID=A0A2N8ZGX7_9VIBR)

HSP 1 Score: 109 bits (273), Expect = 1.120e-23
Identity = 109/315 (34.60%), Postives = 138/315 (43.81%), Query Frame = 1
Query:  217 LDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            LD+P  G   + VD  GG  GHR K   GK + + KAA L K                                             ATP  L  D TAGLG D+F+LA  G +V+M ER+PVVA+L+ D L+RA A D E       RM+L  A S + L T                      G  RPDVVYLDPM+P P    K+KSALVKK M++ Q+L+  AD +A                     DG                L   AM+LAT++VVVKRP + A  +   KP+ A+ +K  RFDVYV
Sbjct:   47 LDEPKLG--AIAVDLVGGAVGHRRKFGGGKGQSIAKAAGLNKG--------------------------------------------ATPSVL--DGTAGLGRDAFVLASLGCKVQMIERNPVVAALLDDGLERAKA-DAEIGVWVGERMSLLHASSLDALDTLFE-----------------QEGFERPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQSLVG-ADTDA---------------------DG----------------LLVPAMALATKRVVVKRPDY-ANWLDEQKPTMAIETKKNRFDVYV 254          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: UPI00189DF5A3 (class I SAM-dependent methyltransferase n=1 Tax=Vibrio sp. VB16 TaxID=2785746 RepID=UPI00189DF5A3)

HSP 1 Score: 107 bits (266), Expect = 1.020e-22
Identity = 106/331 (32.02%), Postives = 143/331 (43.20%), Query Frame = 1
Query:  178 KFRMLFDKEGRLAL---DQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            +F ++   E RL L   D+P  G   + VD  GG  GHR K   GK + + KAA L K                                                +P + D TAGLG D+F+LA  G +V+M ER+PVVA+L+ D L+RA   D E     + RM+L  A S + L    +                      RPDVVYLDPM+P P     +KSALVKK M++ Q+L+  AD++A                     DG                LF+ AM LA ++V+VKRP + A  +   KPS A+ +K  RFDVYV
Sbjct:   32 RFALVLSSE-RLELRKIDEPKLG--AIYVDLVGGPVGHRRKFGGGKAQSIAKAAGLNKGV----------------------------------------------IPSVLDATAGLGRDAFVLASLGCKVQMIERNPVVAALLDDGLERAKQ-DPEIGVWVSERMSLLHASSHDALEIISN-----------------DRNFLRPDVVYLDPMYPHPEG---KKSALVKKEMRVFQSLVG-ADLDA---------------------DG----------------LFEPAMKLAKKRVIVKRPDY-ADWLNQQKPSMAIKTKKNRFDVYV 253          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A0B8NNY6_9VIBR (Ribosomal RNA small subunit methyltransferase J n=3 Tax=Vibrio ishigakensis TaxID=1481914 RepID=A0A0B8NNY6_9VIBR)

HSP 1 Score: 107 bits (266), Expect = 1.070e-22
Identity = 106/325 (32.62%), Postives = 140/325 (43.08%), Query Frame = 1
Query:  187 MLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 1161
            +L DK     LD+P  G   + VDF+GG   HR K   GK + + KAA L K                                                 P + D TAGLG D+F+LA  G +V+M ER PVVA+L+ D L RA + D E     + RM+L  A S + L+     +                 G  +PDVVYLDPM+P P    K+KSALVKK M++ Q L+  AD++A                     DG                L   A+ LAT++VVVKRP + A  +   KPS A+ +K  RFDVYV
Sbjct:   35 VLEDKLELKKLDEPKLG--SIFVDFAGGAVAHRRKFGGGKGQAIAKAAGLNKGVT----------------------------------------------PNVLDGTAGLGRDAFVLASLGCKVQMVERHPVVAALLDDGLKRAKS-DPEIGTWVSERMSLLHASSLDALSKLAEDL-----------------GFVKPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQHLVG-ADLDA---------------------DG----------------LLTPALELATKRVVVKRPDY-ANWLDEKKPSMAIETKKNRFDVYV 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JS05_9PHAE3.270e-12860.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPX8_ECTSI2.060e-12761.50SAM-dependent methyltransferase n=1 Tax=Ectocarpus... [more]
A0A836C901_9STRA1.380e-3333.94Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A7S3XWK9_HETAK6.340e-2931.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1G8DB25_9VIBR6.060e-2432.70Ribosomal RNA small subunit methyltransferase J n=... [more]
RSMJ_VIBVY8.160e-2432.23Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A1M5ZIR1_9VIBR8.900e-2432.38Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A2N8ZGX7_9VIBR1.120e-2334.60Ribosomal RNA small subunit methyltransferase J n=... [more]
UPI00189DF5A31.020e-2232.02class I SAM-dependent methyltransferase n=1 Tax=Vi... [more]
A0A0B8NNY6_9VIBR1.070e-2232.62Ribosomal RNA small subunit methyltransferase J n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6108contigL-elsbetiae_contig6108:5378..7357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score359.0
Seed ortholog evalue2.4e-96
Seed eggNOG ortholog2880.D7FPX8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Putative SAM-dependent methyltransferase
EggNOG OGs2SA1Z@2759,COG0500@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-01_008260.1
Exons3
Model size1382
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6108.14663.1prot_L-elsbetiae_contig6108.14663.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6108 5587..7171 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.3089905-UTR-L-elsbetiae_contig6108:5377..55861622816668.3089905-UTR-L-elsbetiae_contig6108:5377..5586Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 5378..5586 -
1691683726.2325647-UTR-L-elsbetiae_contig6108:5377..55861691683726.2325647-UTR-L-elsbetiae_contig6108:5377..5586Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 5378..5586 -
1622816668.358032-UTR-L-elsbetiae_contig6108:7171..73571622816668.358032-UTR-L-elsbetiae_contig6108:7171..7357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 7172..7357 -
1691683726.2773905-UTR-L-elsbetiae_contig6108:7171..73571691683726.2773905-UTR-L-elsbetiae_contig6108:7171..7357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6108 7172..7357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.3214662-CDS-L-elsbetiae_contig6108:5586..61561622816668.3214662-CDS-L-elsbetiae_contig6108:5586..6156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 5587..6156 -
1691683726.2437737-CDS-L-elsbetiae_contig6108:5586..61561691683726.2437737-CDS-L-elsbetiae_contig6108:5586..6156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 5587..6156 -
1622816668.3335109-CDS-L-elsbetiae_contig6108:6569..69201622816668.3335109-CDS-L-elsbetiae_contig6108:6569..6920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 6570..6920 -
1691683726.2529488-CDS-L-elsbetiae_contig6108:6569..69201691683726.2529488-CDS-L-elsbetiae_contig6108:6569..6920Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 6570..6920 -
1622816668.3477967-CDS-L-elsbetiae_contig6108:7105..71711622816668.3477967-CDS-L-elsbetiae_contig6108:7105..7171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 7106..7171 -
1691683726.26667-CDS-L-elsbetiae_contig6108:7105..71711691683726.26667-CDS-L-elsbetiae_contig6108:7105..7171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6108 7106..7171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6108.14663.1

>prot_L-elsbetiae_contig6108.14663.1 ID=prot_L-elsbetiae_contig6108.14663.1|Name=mRNA_L-elsbetiae_contig6108.14663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
MLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAAL
PKRRAAASALAAAAATKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATP
LPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDD
ETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRP
DVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEEL
NGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVH
GAAIVRHVKPSHAVVSKNGRFDVYVVPP*
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mRNA from alignment at L-elsbetiae_contig6108:5378..7357-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6108.14663.1 ID=mRNA_L-elsbetiae_contig6108.14663.1|Name=mRNA_L-elsbetiae_contig6108.14663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig6108:5378..7357- (Laminarionema elsbetiae ELsaHSoW15)
GTGGCAGTGCTGGCGCGGGGTGACAACGACCTTGAGCGATGTCGACGACT AGCGCAAAAGCTAGGGGTGGAGTTGGTGGTTCCGCGGCGAGAAGACGATG CAGAGCAAAGGAAAGAGCAGGAAGGGAGAGGGGGGAGGGCTGTTGGAAGT GCTGCCGAAGGGGGGCATCGAGAAATCAAATTCAGGATGCTTTTCGATAA GGAGGGGCGCTTGGCGTTGGATCAACCGGGAAGTGGGTTCAACCCTCTAG TGGTGAGACGACCAAACGAAGTGTATATCTACTACTTCGAAGTACGTACC ACGAAGAACAAGCCTCAGCCCCCTCTTTGATTACGATAGTTTTCTGCAGA GACACCGATTGATTCCAGATCTTGAATATTCCGTTGTGTGCAGTAGGCCG AGTTTGAAGAGTCATGTATCTACGCGTGTTGCTGCAGGTGGACTTCTCGG GAGGGAAGACCGGGCACCGGTCGAAACACCAACAGGGAAAGACGGAGCAG GTGGTCAAGGCTGCAGCGCTCCCCAAGCGCCGCGCCGCCGCCTCCGCGCT CGCCGCAGCCGCCGCTACCAAAGAGAGTCGTCGACCTTTTCCCTCCAGGC AATCGCCTGGTTCTTGTCTACCTCTGACGAACGATGACGACATCGATCAA AACGACGAGGTGGCGACCCCGTTGCCGCTGCTGTGGGACCTTACCGCGGG CTTGGGCACGGATTCGTTTCTCCTTGCCCAAGCGGGGTGGCGGGTGGAGA TGTTTGAGCGGTCGCCAGTGGTTGCATCTCTGGTGCAGGTACGCATCGTG TGTCGTTGCATAGTTTTGGTGCTACTTAGGGGGGGGGGGGGGGGGGGGGT AGGTACTGAACAGGCGTTGCTAAATAGGTTACACGCACGCAAGGTACATG TTCGATGCGTTACTGGCTCAGGCTTGCGTGAGTGAGTCGGCTTGTAAAAT ATTGCATAGGTACCTGCTTGGAGGCAACAGTTGATTGGATGTCTGTAGTT TGGTAGTTTTCTACTAATCTCGAGATATGTGTCTAGTCTTCGACCTGTCC CGTGTTGACGTGCTTTATAGTCTTCGTGCCGTCGGGAGCACGATCTTGGA TGGGTGTTTCTTCAACAAGAGAGAGTAGCTTCCGTGTTGCATTATCGCCA CTGTGTTCATGGTCCAATATCGATCGCGATTGATTTTTTCAACAACCACA GGACGCTTTGGATCGTGCTTTGGCCGGCGACGACGAAACGGCGCGCACGG CTGCTTCCCGCATGAACCTTACGGTAGCAGAAAGCACCGAGTTCTTGGCA ACGTTCAGATCGCCGATATCAGCAACAGGAACAGTAGCGGCGGTTGGTGG AGAGGAAGGTGCGAGTACTGGTGCTCCCCGACCAGATGTGGTCTACCTCG ACCCCATGTTTCCTCAGCCGAGACAGAGCAAGAAACGAAAGTCCGCGCTC GTGAAGAAGGGCATGCAGATGCTGCAGGCATTGTTAGAGGAGGCGGACGT GGAGGCGGGAAGGAGAGAGGGTCATGAAGAATTAAATGGCACGCTACGTG GTGACGGCGGTGATGTTGGTGACGGGAGAGAGGCAAGATCAGGAGTAGAA GAAGGAGGCGGAGAAGAACGAAGGCTGTTCGATGTGGCGATGAGCCTTGC CACCCGCAAGGTGGTCGTGAAGAGGCCAGTACATGGCGCGGCTATAGTGC GGCACGTGAAGCCTTCGCACGCCGTCGTAAGCAAGAACGGCCGTTTCGAT GTGTACGTTGTGCCACCTTAGGGCGAGATAAGGTTATTTTCTAGTCTGCA GGTGTTCAATTTGTGTCTTCAAAGTGAACAAAGCATATCAGTTGGACCTG GTGATTCCTTGAAGAAATAATATTGTAGGCTTTTTTGTGTTATCCCTCGT AAACGAGTTGCGCGCAGGGAACGTAGGAGGTGCTACTTCGGTTGTGGCTA CTACTGTGGGGCTGGGCGAAGATACGAAAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6108:5378..7357-

>mRNA_L-elsbetiae_contig6108.14663.1 ID=mRNA_L-elsbetiae_contig6108.14663.1|Name=mRNA_L-elsbetiae_contig6108.14663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig6108:5378..7357- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTTTTCGATAAGGAGGGGCGCTTGGCGTTGGATCAACCGGGAAGTGG
GTTCAACCCTCTAGTGATGCTTTTCGATAAGGAGGGGCGCTTGGCGTTGG
ATCAACCGGGAAGTGGGTTCAACCCTCTAGTGGTGGACTTCTCGGGAGGG
AAGACCGGGCACCGGTCGAAACACCAACAGGGAAAGACGGAGCAGGTGGT
CAAGGCTGCAGCGCTCCCCAAGCGCCGCGCCGCCGCCTCCGCGCTCGCCG
CAGCCGCCGCTACCAAAGAGAGTCGTCGACCTTTTCCCTCCAGGCAATCG
CCTGGTTCTTGTCTACCTCTGACGAACGATGACGACATCGATCAAAACGA
CGAGGTGGCGACCCCGTTGCCGCTGCTGTGGGACCTTACCGCGGGCTTGG
GCACGGATTCGTTTCTCCTTGCCCAAGCGGGGTGGCGGGTGGAGATGTTT
GAGCGGTCGCCAGTGGTTGCATCTCTGGTGCAGGTGGACTTCTCGGGAGG
GAAGACCGGGCACCGGTCGAAACACCAACAGGGAAAGACGGAGCAGGTGG
TCAAGGCTGCAGCGCTCCCCAAGCGCCGCGCCGCCGCCTCCGCGCTCGCC
GCAGCCGCCGCTACCAAAGAGAGTCGTCGACCTTTTCCCTCCAGGCAATC
GCCTGGTTCTTGTCTACCTCTGACGAACGATGACGACATCGATCAAAACG
ACGAGGTGGCGACCCCGTTGCCGCTGCTGTGGGACCTTACCGCGGGCTTG
GGCACGGATTCGTTTCTCCTTGCCCAAGCGGGGTGGCGGGTGGAGATGTT
TGAGCGGTCGCCAGTGGTTGCATCTCTGGTGCAGGACGCTTTGGATCGTG
CTTTGGCCGGCGACGACGAAACGGCGCGCACGGCTGCTTCCCGCATGAAC
CTTACGGTAGCAGAAAGCACCGAGTTCTTGGCAACGTTCAGATCGCCGAT
ATCAGCAACAGGAACAGTAGCGGCGGTTGGTGGAGAGGAAGGTGCGAGTA
CTGGTGCTCCCCGACCAGATGTGGTCTACCTCGACCCCATGTTTCCTCAG
CCGAGACAGAGCAAGAAACGAAAGTCCGCGCTCGTGAAGAAGGGCATGCA
GATGCTGCAGGCATTGTTAGAGGAGGCGGACGTGGAGGCGGGAAGGAGAG
AGGGTCATGAAGAATTAAATGGCACGCTACGTGGTGACGGCGGTGATGTT
GGTGACGGGAGAGAGGCAAGATCAGGAGTAGAAGAAGGAGGCGGAGAAGA
ACGAAGGCTGTTCGATGTGGCGATGAGCCTTGCCACCCGCAAGGTGGTCG
TGAAGAGGCCAGTACATGGCGCGGCTATAGTGCGGCACGTGAAGCCTTCG
CACGCCGTCGTAAGCAAGAACGGCCGTTTCGATGTGTACGTTGTGCCACC
TTAGGACGCTTTGGATCGTGCTTTGGCCGGCGACGACGAAACGGCGCGCA
CGGCTGCTTCCCGCATGAACCTTACGGTAGCAGAAAGCACCGAGTTCTTG
GCAACGTTCAGATCGCCGATATCAGCAACAGGAACAGTAGCGGCGGTTGG
TGGAGAGGAAGGTGCGAGTACTGGTGCTCCCCGACCAGATGTGGTCTACC
TCGACCCCATGTTTCCTCAGCCGAGACAGAGCAAGAAACGAAAGTCCGCG
CTCGTGAAGAAGGGCATGCAGATGCTGCAGGCATTGTTAGAGGAGGCGGA
CGTGGAGGCGGGAAGGAGAGAGGGTCATGAAGAATTAAATGGCACGCTAC
GTGGTGACGGCGGTGATGTTGGTGACGGGAGAGAGGCAAGATCAGGAGTA
GAAGAAGGAGGCGGAGAAGAACGAAGGCTGTTCGATGTGGCGATGAGCCT
TGCCACCCGCAAGGTGGTCGTGAAGAGGCCAGTACATGGCGCGGCTATAG
TGCGGCACGTGAAGCCTTCGCACGCCGTCGTAAGCAAGAACGGCCGTTTC
GATGTGTACGTTGTGCCACCTTAG
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