prot_L-elsbetiae_contig6108.14663.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6108.14663.1
Unique Nameprot_L-elsbetiae_contig6108.14663.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length329
Homology
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: D7FPX8_ECTSI (SAM-dependent methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX8_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 6.140e-118
Identity = 217/332 (65.36%), Postives = 238/332 (71.69%), Query Frame = 0
Query:    1 MLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLAT--FRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAG--RREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYVVPP 328
            MLFD+ GRLAL QPGSGFNPLVVDF GGKTG+RSKHQQGKTEQVVKAAALPK             T  +  P     SPG             +D+   PLPLLWDLTAGLGTD+FLLAQAGWRVEMFERS VVA+LVQDALDRA  GDDETAR AASRM+LTVA+STE LAT    S  S++  VA       A+ G  RPDVVYLDPMFPQ ++ KK+KSALVKKGMQMLQALLEE D   G  R++G E    T  G GG    G E  +G  EG  EERRLFD+AM  ATRKVVVKRPVHG +IVRHV+PSHAVVSKNGRFDVYVVPP
Sbjct:   69 MLFDETGRLALGQPGSGFNPLVVDFCGGKTGYRSKHQQGKTEQVVKAAALPKRRAA---------TAAADEPL-GPPSPG-------------DDDAKAPLPLLWDLTAGLGTDAFLLAQAGWRVEMFERSSVVAALVQDALDRARVGDDETARKAASRMSLTVADSTEVLATAVVGSSSSSSAPVAR------AAVGFSRPDVVYLDPMFPQQKKGKKKKSALVKKGMQMLQALLEEEDGAEGEKRQQGTEPGGRTPDGAGGGDVSG-EGEAGAVEGQEEERRLFDIAMEFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 370          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A6H5JS05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS05_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 5.750e-114
Identity = 212/335 (63.28%), Postives = 236/335 (70.45%), Query Frame = 0
Query:    1 MLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAALPKXXXXXXXXXXXXXTKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGD-------GGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYVVPP 328
            M FD+ G LAL QPGSGFNPL+VDF GGKTGHRSKHQQG+TEQVVKAAALPK                 RR   +        P   DDD         PLPLLWDLTAGLGTD+FLLAQAGWRV+MFERSPVVA+LVQDALDRA  GDDETARTA SRM+LTVA+STE LA  ++ + ++ + +A      A+ G  RPDVVYLDPMFPQ R+ KK+KSALVKKGMQMLQALLEE D    R EG     GT  G        GGDV    E  +GV E   EERRLFD+AM+ ATRKVVVKRPVHG +IVRHV+PSHAVVSKNGRFDVYVVPP
Sbjct:  215 MFFDETGCLALGQPGSGFNPLLVDFCGGKTGHRSKHQQGRTEQVVKAAALPK-----------------RRAATTAADAALRPPSPGDDDA------KAPLPLLWDLTAGLGTDAFLLAQAGWRVKMFERSPVVAALVQDALDRARVGDDETARTATSRMSLTVADSTEVLA--KAVVGSSSSPSA--SVTSAAVGFSRPDVVYLDPMFPQQRKGKKKKSALVKKGMQMLQALLEEED----RAEGENMQQGTEIGGRIPDGAGGGDVTG--EGEAGVVENREEERRLFDIAMNFATRKVVVKRPVHGPSIVRHVQPSHAVVSKNGRFDVYVVPP 516          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A7S3XWK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWK9_HETAK)

HSP 1 Score: 113 bits (283), Expect = 9.070e-26
Identity = 84/226 (37.17%), Postives = 111/226 (49.12%), Query Frame = 0
Query:   99 TPLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVY 324
            T  P++WD+TAGLG DSF+LA AG RV M ERSPV+ S++ D L+R    +D+ ++   S ++L++ +ST+         S   TV             P P VVYLDPMFP      K K AL KK MQ+LQ LL     +A + E                               EE  LF+VA+ L +R+VVVKRP  G  +     PS  +  K  RFDVY
Sbjct:  107 TRTPVVWDMTAGLGRDSFILACAGCRVHMLERSPVIGSILLDGLERLGKDEDQQSKEIRSLLSLSIGDSTKM-----QMASVINTV-------------PEPQVVYLDPMFPA-----KSKKALAKKDMQILQGLLGHGIDQAEKEE-------------------------------EEENLFNVALRLCSRRVVVKRPAKGPPLAGR-PPSFVLPGKTNRFDVY 277          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: RSMJ_VIBA3 (Ribosomal RNA small subunit methyltransferase J n=133 Tax=Vibrionales TaxID=135623 RepID=RSMJ_VIBA3)

HSP 1 Score: 99.4 bits (246), Expect = 1.130e-20
Identity = 85/224 (37.95%), Postives = 112/224 (50.00%), Query Frame = 0
Query:  102 PLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 325
            P + D TAGLG D+F+LA  G +V+M ER PVVA+L+ D L RA   D +     + RM L  A S + L    +                      +PDVVYLDPM+P P    K+KSALVKK M++ Q+L+  AD++A                     DG                LF+ AM LAT++VVVKRP + AA +   KPS A+ +K  RFDVYV
Sbjct:   90 PTILDGTAGLGRDAFVLASLGCKVQMVERHPVVAALLDDGLQRAQK-DPDIGGWVSERMKLIHASSHDALDKLSN-----------------DPNFEQPDVVYLDPMYPHPEN--KKKSALVKKEMRVFQSLVG-ADLDA---------------------DG----------------LFEPAMKLATKRVVVKRPDY-AAWLDEQKPSMAIETKKNRFDVYV 254          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A836C901_9STRA (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C901_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.410e-20
Identity = 67/137 (48.91%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  100 PLPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEE 236
            P PL+WDLTAGLG DSF++A AG RV MFERSPVVA+L+QDAL R  A  +  A+  ASRM L VA+S      F+                       RPDV  LDPMFP      K K ALVKK MQ+LQ+L ++
Sbjct:   93 PPPLVWDLTAGLGRDSFVMAGAGCRVVMFERSPVVAALLQDALVRLAAAPEADAQQVASRMQLHVADSCSLGDAFQLECE-------------------RPDVCLLDPMFPP-----KTKKALVKKDMQVLQSLFQQ 205          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: F3KF75_9GAMM (Ribosomal RNA small subunit methyltransferase J n=1 Tax=gamma proteobacterium IMCC2047 TaxID=434085 RepID=F3KF75_9GAMM)

HSP 1 Score: 98.2 bits (243), Expect = 3.570e-20
Identity = 83/223 (37.22%), Postives = 113/223 (50.67%), Query Frame = 0
Query:  102 PLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVY 324
            P + D TAGLG D+F+LA  G  V M ERSPVVA +++DAL RA    + +  TA  RM L  A++ +F+              A+  E+        P+VVYLDPMFP+     + KSA VKK M++LQ LL  AD++            TL                          LF+ A+++ATR+VVVKRP   A  +  +KP H V  K+GRFD+Y
Sbjct:  106 PTVLDATAGLGRDAFILASRGCSVIMLERSPVVALMLEDALRRAQLDPEVSPVTA--RMQLYQADACQFMT-------------ALSSED-------YPEVVYLDPMFPE-----RSKSASVKKEMRLLQQLLG-ADMD------------TLE-------------------------LFETALTVATRRVVVKRPKL-APCISELKPHHVVEGKSGRFDIY 262          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A3S3QMH9_9DELT (Ribosomal RNA small subunit methyltransferase J n=2 Tax=Candidatus Electrothrix TaxID=1859128 RepID=A0A3S3QMH9_9DELT)

HSP 1 Score: 98.6 bits (244), Expect = 3.700e-20
Identity = 85/221 (38.46%), Postives = 112/221 (50.68%), Query Frame = 0
Query:  106 DLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGAST-GAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 325
            D T GLG DSFLLA AG RV +FER PV+A+L+ D L RA A   ETA  +  R+ LTV ++   L   +     TG      GE+G    G    DVVYLDPMFP+     +RKSALVKK +Q+LQ L   A +++                                      +L + A+  ATR+VVVKRP+  A  +  + PSH++  K  RFDVY+
Sbjct:  111 DATGGLGRDSFLLAAAGHRVHIFERQPVIAALLADGLARA-AAHPETAEIS-RRIRLTVGDAVPALEVMQE----TG-----AGEKGEDCEGGEGVDVVYLDPMFPE-----RRKSALVKKELQLLQLL---AHLDSS-----------------------------------PEKLLESALEAATRRVVVKRPMK-APFLTDLSPSHSLSGKTVRFDVYL 276          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: UPI00189DF5A3 (class I SAM-dependent methyltransferase n=1 Tax=Vibrio sp. VB16 TaxID=2785746 RepID=UPI00189DF5A3)

HSP 1 Score: 97.8 bits (242), Expect = 4.090e-20
Identity = 83/225 (36.89%), Postives = 113/225 (50.22%), Query Frame = 0
Query:  101 LPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 325
            +P + D TAGLG D+F+LA  G +V+M ER+PVVA+L+ D L+RA   D E     + RM+L  A S + L    +                      RPDVVYLDPM+P P     +KSALVKK M++ Q+L+  AD++A                     DG                LF+ AM LA ++V+VKRP + A  +   KPS A+ +K  RFDVYV
Sbjct:   89 IPSVLDATAGLGRDAFVLASLGCKVQMIERNPVVAALLDDGLERAKQ-DPEIGVWVSERMSLLHASSHDALEIISN-----------------DRNFLRPDVVYLDPMYPHPEG---KKSALVKKEMRVFQSLVG-ADLDA---------------------DG----------------LFEPAMKLAKKRVIVKRPDY-ADWLNQQKPSMAIKTKKNRFDVYV 253          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A444JHE8_9DELT (Ribosomal RNA small subunit methyltransferase J n=2 Tax=Candidatus Electrothrix marina TaxID=1859130 RepID=A0A444JHE8_9DELT)

HSP 1 Score: 98.6 bits (244), Expect = 4.310e-20
Identity = 85/221 (38.46%), Postives = 112/221 (50.68%), Query Frame = 0
Query:  106 DLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGAST-GAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 325
            D T GLG DSFLLA AG RV +FER PV+A+L+ D L RA A   ETA  +  R+ LTV ++   L   +     TG      GE+G    G    DVVYLDPMFP+     +RKSALVKK +Q+LQ L   A +++                                      +L + A+  ATR+VVVKRP+  A  +  + PSH++  K  RFDVY+
Sbjct:  120 DATGGLGRDSFLLAAAGHRVHIFERQPVIAALLADGLARA-AAHPETAEIS-RRIRLTVGDAVPALEVMQE----TG-----AGEKGEDCEGGEGVDVVYLDPMFPE-----RRKSALVKKELQLLQLL---AHLDSS-----------------------------------PEKLLESALEAATRRVVVKRPMK-APFLTDLSPSHSLSGKTVRFDVYL 285          
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Match: A0A3S4T6K9_9DELT (Ribosomal RNA small subunit methyltransferase J n=1 Tax=Candidatus Electrothrix aarhusiensis TaxID=1859131 RepID=A0A3S4T6K9_9DELT)

HSP 1 Score: 98.2 bits (243), Expect = 5.120e-20
Identity = 81/220 (36.82%), Postives = 108/220 (49.09%), Query Frame = 0
Query:  106 DLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDDETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRPDVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEELNGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVHGAAIVRHVKPSHAVVSKNGRFDVYV 325
            D T GLG DSFLLA AG+RV +FER  ++A+L+ D L RA A   ETA  +  R+ LTV ++   L   +   +A G   A   EEG        DVVYLDPMFP+     +RKSALVKK +Q+LQ L     V                                        +L   A+ +A ++VVVKRP+  A  +  + PSH++  K  RFDVY+
Sbjct:  108 DATGGLGRDSFLLAAAGYRVSIFERQSIIAALLADGLARA-AAHPETAEIS-QRIRLTVGDAVPALEAMQEIRTAEGYEEAEDCEEGEGV-----DVVYLDPMFPE-----RRKSALVKKELQLLQLLASPDSV--------------------------------------PEKLLAAALEVARQRVVVKRPLK-APYLTALSPSHSLTGKTVRFDVYL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6108.14663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPX8_ECTSI6.140e-11865.36SAM-dependent methyltransferase n=1 Tax=Ectocarpus... [more]
A0A6H5JS05_9PHAE5.750e-11463.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XWK9_HETAK9.070e-2637.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
RSMJ_VIBA31.130e-2037.95Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A836C901_9STRA2.410e-2048.91Ribosomal RNA small subunit methyltransferase J n=... [more]
F3KF75_9GAMM3.570e-2037.22Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A3S3QMH9_9DELT3.700e-2038.46Ribosomal RNA small subunit methyltransferase J n=... [more]
UPI00189DF5A34.090e-2036.89class I SAM-dependent methyltransferase n=1 Tax=Vi... [more]
A0A444JHE8_9DELT4.310e-2038.46Ribosomal RNA small subunit methyltransferase J n=... [more]
A0A3S4T6K9_9DELT5.120e-2036.82Ribosomal RNA small subunit methyltransferase J n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007536Ribosomal RNA small subunit methyltransferase JPFAMPF04445SAM_MTcoord: 102..236
e-value: 4.0E-28
score: 98.4
coord: 278..325
e-value: 1.3E-8
score: 34.6
IPR007536Ribosomal RNA small subunit methyltransferase JPANTHERPTHR36112FAMILY NOT NAMEDcoord: 17..325
IPR007536Ribosomal RNA small subunit methyltransferase JHAMAPMF_0152316SrRNA_methyltr_Jcoord: 1..327
score: 24.32
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 101..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6108contigL-elsbetiae_contig6108:5587..7171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6108.14663.1mRNA_L-elsbetiae_contig6108.14663.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6108 5378..7357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6108.14663.1 ID=prot_L-elsbetiae_contig6108.14663.1|Name=mRNA_L-elsbetiae_contig6108.14663.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
MLFDKEGRLALDQPGSGFNPLVVDFSGGKTGHRSKHQQGKTEQVVKAAAL
PKRRAAASALAAAAATKESRRPFPSRQSPGSCLPLTNDDDIDQNDEVATP
LPLLWDLTAGLGTDSFLLAQAGWRVEMFERSPVVASLVQDALDRALAGDD
ETARTAASRMNLTVAESTEFLATFRSPISATGTVAAVGGEEGASTGAPRP
DVVYLDPMFPQPRQSKKRKSALVKKGMQMLQALLEEADVEAGRREGHEEL
NGTLRGDGGDVGDGREARSGVEEGGGEERRLFDVAMSLATRKVVVKRPVH
GAAIVRHVKPSHAVVSKNGRFDVYVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR00753616SrRNA_methylTrfase_J
IPR029063SAM-dependent_MTases