Homology
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)
HSP 1 Score: 367 bits (942), Expect = 9.750e-121
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 1
Query: 469 DKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGARADQAKKAAA-AMPKGAKPITSFFQKA 1125
+KPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILS MWK LGE EVARYAKLA EDKER+KNELAAAGLTK P KNSS+A+V GGPTSLVLPLARVRK VRLDPSVGNISKEGLLL+TKATEVFM+ +ADHAW IGRQTGRKS+RPCDVADFVFAAPEMYWLKDEFREERSSVKK+QS+PE GA+A A KA A+PKGAKPITSFFQKA
Sbjct: 174 EKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGGPTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A6H5K256_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K256_9PHAE)
HSP 1 Score: 115 bits (289), Expect = 5.800e-26
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 1
Query: 469 DKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKL 648
+KPD SKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILS MWKGLGE EVARYAK+
Sbjct: 181 EKPDESKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKGLGEAEVARYAKV 240
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A1V9ZYX4_9STRA (HMG box domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX4_9STRA)
HSP 1 Score: 114 bits (286), Expect = 1.560e-25
Identity = 76/221 (34.39%), Postives = 121/221 (54.75%), Query Frame = 1
Query: 472 KPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERM---KNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGARADQAKKAAAAMPKGAKPITSFFQKA 1125
K D + +A+ +SA+ FLAD R V+ E+P +G +QKIL +WK L ++ Y + A+ DKER K L G+ P K A+ L+LPLARV++ ++ DP VG ISK+ L+++TKATE F+ ++A + RK+I+ D+ + + WL+D+F + V R S+ +V ++AK AA P+ IT+FF ++
Sbjct: 42 KDDDTNVAKPQSAYFHFLADKRPQVKAENPNATIGALQKILGTLWKELSAEDKEPYIQKALLDKERYAKAKERLLERGIDIEPEKPEVASE-----DILLLPLARVKRIIQADPDVGKISKDALIVITKATEQFIQYLAAKGQDSAMISKRKTIKDSDLLQVIHGHGSLDWLRDDFPQ----VSSRPSEAKVGSKGNNEAKTEAANGPR----ITTFFTRS 249
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA)
HSP 1 Score: 110 bits (276), Expect = 5.000e-24
Identity = 79/227 (34.80%), Postives = 124/227 (54.63%), Query Frame = 1
Query: 463 GKDKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERM---KNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFRE--ERSSVKKRQSKPEVSGARADQAKKAAAAMPKGAKP-ITSFFQKA 1125
GKD G +++ +SA+ FLA R V+ ++PG A+G +QKIL WK L +E Y +LA++DKER K EL A G+ P K + A+ L LP ARV++ + D V +SK+ L+ +TKATE+F+ ++A + + RK+I+ D+ + + WL+D+F + RS+V+ P+ AK ++ P G P I+SFFQ+A
Sbjct: 53 GKDDK-GPLVSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIEPEKTTVASE-----DVLSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVE-----PKA-------AKVSSRTEPSGNAPSISSFFQRA 261
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI)
HSP 1 Score: 108 bits (269), Expect = 1.190e-22
Identity = 56/166 (33.73%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 493 ARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 990
++ +SAWMLF+ + RE V++++P +AV QKI+S +WK L DE Y A +D++R K E A + K ++ G T LV P+ R+ + ++LD V +++KE L+ KA E+F S MA ++ + + R+ ++ D+ D + + YW+KD+F
Sbjct: 141 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTN--DEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDF 304
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A8K1FA27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA27_PYTOL)
HSP 1 Score: 104 bits (260), Expect = 3.880e-22
Identity = 68/225 (30.22%), Postives = 121/225 (53.78%), Query Frame = 1
Query: 496 RARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTS--LVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKR----QSKPEVSGARADQAKKAAAAMPKGAKPITSFFQKA*LDLPEGLM 1152
+ +SA+ LF AD R+ V +E+PGL +G +QK+++A WK L +E Y LAV+DKER + E + P N+ V PT + PL RV++ ++ DP V +S+E L+ ++KA+E+F ++A +++ ++ I+ DVA + + WL+++F + + + R +S + + +R +A KA ++SFFQ+ D + M
Sbjct: 6 KPQSAYFLFAADKRKTVAQENPGLRIGEIQKLITAQWKELSAEEKEHYTTLAVQDKERYEREKLE-NPVELPEANAQD-GVEDEPTGNVCIYPLGRVKRIIQSDPDVNKVSREALIAISKASELFAQYLATKSYEQTLYNNKRQIKASDVARAIQTTSVLDWLREDFPDVKPAAATRSNGSKSTSDTATSRKAKATKAG---------VSSFFQQTANDTADEPM 219
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE)
HSP 1 Score: 108 bits (269), Expect = 5.660e-22
Identity = 56/166 (33.73%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 493 ARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 990
++ +SAWMLF+ + RE V++++P +AV QKI+S +WK L DE Y A +D++R K E A + K ++ G T LV P+ R+ + ++LD V +++KE L+ KA E+F S MA ++ + + R+ ++ D+ D + + YW+KD+F
Sbjct: 248 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTN--DEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDF 411
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
G4YKY3_PHYSP (HMG box domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YKY3_PHYSP)
HSP 1 Score: 102 bits (255), Expect = 1.400e-21
Identity = 53/167 (31.74%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 490 IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 990
+ + +S+++LF + R+ V E+PG +G +QKI+SA WK L +E Y +LA +DKER + EL + A+ ++ + + PL RVRK V+ DP VG ISK+ L+ + KA+E+F F+ +++ ++ ++ DV + + WL+++F
Sbjct: 4 VKKPQSSYLLFCNERRKQVMDENPGARIGDIQKIISAQWKELKPEEKEVYVQLAAKDKERYQQELL--DNPQIDAEPTAEGRAAHDSNACIYPLGRVRKIVQSDPDVGKISKDALIAIAKASELFAQFLGTKSYEQALYRNKRQVKASDVTRTIQTTASLDWLREDF 168
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA)
HSP 1 Score: 103 bits (258), Expect = 2.200e-21
Identity = 71/215 (33.02%), Postives = 113/215 (52.56%), Query Frame = 1
Query: 484 SKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLV-LPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERS-SVKKRQSKPEVSGARADQAKKAAAAMPKGAKPITSFFQK 1122
+K+A+ SA+ FLA NR V E+PGL +GP+QKILS W L + + +A DKER N+ + L +A VP SL+ LP ARV++ + DP V +SK+ +L +TKATE+F+ F+A + RK+++ DV + + + WL+D+F E + V + SK + + + + ++ ITSFF +
Sbjct: 67 TKLAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQS--LMDQGIDIEAAPRVPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATEASPSSSSSAKSKITSFFSR 279
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match:
A0A2D4BV20_PYTIN (HMG box domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV20_PYTIN)
HSP 1 Score: 102 bits (255), Expect = 2.700e-21
Identity = 54/181 (29.83%), Postives = 102/181 (56.35%), Query Frame = 1
Query: 490 IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKP 1032
+ + RSA+ +F + R+ + +PGL VG +QK+++A WK L +E Y LA +DKER + E + PA + V + + PL RV++ ++ DP V +S+E L+ ++KA+E+F ++A +++ ++ ++ DVA + P + WL+D+F + + S +++KP
Sbjct: 4 VKKPRSAYFIFSGEKRKEITDANPGLRVGDVQKLITARWKELTPEEKXVYLDLAAKDKERYERERLENPVXDAPADVVAPVEVEH---ACLYPLGRVKRXIQSDPDVNKVSREALVAISKASELFAQYLATKSYEQTLFNNKRQVKASDVARAIHTTPVLDWLRDDFPDMKQSAATQKTKP 181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.75e-121 / Id = 86.36 Expect = 5.80e-26 / Id = 91.67 Expect = 1.56e-25 / Id = 34.39 Expect = 5.00e-24 / Id = 34.80 Expect = 1.19e-22 / Id = 33.73 Expect = 3.88e-22 / Id = 30.22 Expect = 5.66e-22 / Id = 33.73 Expect = 1.40e-21 / Id = 31.74 Expect = 2.20e-21 / Id = 33.02 Expect = 2.70e-21 / Id = 29.83 Sequence D8LIR0_ECTSI A0A6H5K256_9PHAE A0A1V9ZYX4_9STRA A0A1V9ZFH9_9STRA D7G2P1_ECTSI A0A8K1FA27_PYTOL A0A6H5KV94_9PHAE G4YKY3_PHYSP W4H0Q5_9STRA A0A2D4BV20_PYTIN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 112.1
Seed ortholog evalue 5.8e-22
Seed eggNOG ortholog 112098.XP_008611757.1
Preferred name HMGB2
KEGG rclass RC02795
KEGG ko ko:K03004,ko:K03506,ko:K08066,ko:K10802,ko:K11295,ko:K11296,ko:K11297,ko:K11656,ko:K15413
KEGG Reaction R00375,R00376,R00377,R00378,R00435,R00441,R00442,R00443
KEGG Pathway ko00230,ko00240,ko01100,ko03020,ko03030,ko03410,ko03420,ko04140,ko04217,ko04612,ko05152,ko05166,ko05168,ko05203,map00230,map00240,map01100,map03020,map03030,map03410,map03420,map04140,map04217,map04612,map05152,map05166,map05168,map05203
KEGG Module M00182,M00263
Hectar predicted targeting category other localisation
GOs GO:0000003,GO:0000122,GO:0000217,GO:0000228,GO:0000400,GO:0000401,GO:0000402,GO:0000405,GO:0000723,GO:0000737,GO:0000785,GO:0000790,GO:0000793,GO:0000902,GO:0000976,GO:0001067,GO:0001158,GO:0001530,GO:0001654,GO:0001667,GO:0001708,GO:0001773,GO:0001775,GO:0001776,GO:0001780,GO:0001786,GO:0001816,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001934,GO:0001935,GO:0001936,GO:0001938,GO:0002053,GO:0002119,GO:0002164,GO:0002200,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002250,GO:0002252,GO:0002253,GO:0002262,GO:0002263,GO:0002270,GO:0002274,GO:0002275,GO:0002281,GO:0002283,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002312,GO:0002322,GO:0002366,GO:0002376,GO:0002407,GO:0002437,GO:0002443,GO:0002444,GO:0002446,GO:0002460,GO:0002520,GO:0002521,GO:0002562,GO:0002643,GO:0002682,GO:0002683,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002694,GO:0002695,GO:0002696,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002755,GO:0002757,GO:0002758,GO:0002759,GO:0002764,GO:0002790,GO:0002791,GO:0002793,GO:0002819,GO:0002822,GO:0002831,GO:0002832,GO:0002834,GO:0002837,GO:0002840,GO:0002920,GO:0002921,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003682,GO:0003684,GO:0003690,GO:0003697,GO:0003700,GO:0003723,GO:0003725,GO:0003727,GO:0003824,GO:0003887,GO:0005102,GO:0005125,GO:0005178,GO:0005488,GO:0005515,GO:0005539,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0005981,GO:0006109,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006266,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006284,GO:0006308,GO:0006309,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006909,GO:0006915,GO:0006921,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006974,GO:0006996,GO:0006997,GO:0007010,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007204,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007346,GO:0007379,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007548,GO:0007623,GO:0008047,GO:0008097,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008201,GO:0008219,GO:0008283,GO:0008284,GO:0008289,GO:0008301,GO:0008348,GO:0008406,GO:0008584,GO:0008622,GO:0008623,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009306,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010243,GO:0010464,GO:0010468,GO:0010469,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010594,GO:0010595,GO:0010596,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010632,GO:0010633,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010858,GO:0010906,GO:0010907,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014910,GO:0014911,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016055,GO:0016192,GO:0016444,GO:0016477,GO:0016604,GO:0016605,GO:0016740,GO:0016772,GO:0016779,GO:0016829,GO:0017025,GO:0017055,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019725,GO:0019843,GO:0019887,GO:0019899,GO:0019904,GO:0019953,GO:0019955,GO:0019956,GO:0019958,GO:0022008,GO:0022407,GO:0022408,GO:0022409,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030030,GO:0030036,GO:0030097,GO:0030098,GO:0030100,GO:0030141,GO:0030154,GO:0030155,GO:0030162,GO:0030182,GO:0030217,GO:0030234,GO:0030262,GO:0030295,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030336,GO:0030545,GO:0030595,GO:0031010,GO:0031099,GO:0031100,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031333,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031491,GO:0031493,GO:0031497,GO:0031532,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032069,GO:0032070,GO:0032071,GO:0032072,GO:0032075,GO:0032101,GO:0032102,GO:0032103,GO:0032147,GO:0032200,GO:0032268,GO:0032270,GO:0032386,GO:0032387,GO:0032392,GO:0032423,GO:0032425,GO:0032479,GO:0032481,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032508,GO:0032640,GO:0032642,GO:0032647,GO:0032648,GO:0032649,GO:0032651,GO:0032652,GO:0032653,GO:0032655,GO:0032675,GO:0032677,GO:0032680,GO:0032689,GO:0032722,GO:0032727,GO:0032728,GO:0032731,GO:0032732,GO:0032733,GO:0032735,GO:0032755,GO:0032757,GO:0032760,GO:0032868,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032881,GO:0032940,GO:0032943,GO:0032944,GO:0032946,GO:0032989,GO:0032991,GO:0033032,GO:0033034,GO:0033036,GO:0033151,GO:0033157,GO:0033218,GO:0033365,GO:0033554,GO:0033674,GO:0033993,GO:0034061,GO:0034097,GO:0034121,GO:0034123,GO:0034134,GO:0034135,GO:0034137,GO:0034142,GO:0034143,GO:0034145,GO:0034162,GO:0034163,GO:0034165,GO:0034284,GO:0034341,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034728,GO:0034774,GO:0035218,GO:0035282,GO:0035295,GO:0035326,GO:0035710,GO:0035711,GO:0035767,GO:0035868,GO:0036230,GO:0036336,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0040025,GO:0042056,GO:0042088,GO:0042093,GO:0042100,GO:0042102,GO:0042104,GO:0042110,GO:0042113,GO:0042116,GO:0042119,GO:0042127,GO:0042129,GO:0042221,GO:0042277,GO:0042325,GO:0042327,GO:0042330,GO:0042393,GO:0042493,GO:0042575,GO:0042592,GO:0042742,GO:0042766,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043277,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043367,GO:0043370,GO:0043371,GO:0043388,GO:0043408,GO:0043410,GO:0043434,GO:0043467,GO:0043470,GO:0043471,GO:0043535,GO:0043536,GO:0043537,GO:0043542,GO:0043549,GO:0043565,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044378,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045063,GO:0045087,GO:0045088,GO:0045089,GO:0045121,GO:0045137,GO:0045165,GO:0045184,GO:0045185,GO:0045321,GO:0045322,GO:0045577,GO:0045578,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045597,GO:0045619,GO:0045620,GO:0045637,GO:0045638,GO:0045639,GO:0045646,GO:0045648,GO:0045652,GO:0045654,GO:0045661,GO:0045663,GO:0045664,GO:0045666,GO:0045739,GO:0045765,GO:0045766,GO:0045785,GO:0045787,GO:0045806,GO:0045819,GO:0045859,GO:0045860,GO:0045862,GO:0045892,GO:0045893,GO:0045898,GO:0045913,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046546,GO:0046631,GO:0046632,GO:0046634,GO:0046636,GO:0046637,GO:0046639,GO:0046649,GO:0046651,GO:0046661,GO:0046700,GO:0046822,GO:0046823,GO:0046825,GO:0046826,GO:0046903,GO:0046982,GO:0046983,GO:0048018,GO:0048232,GO:0048468,GO:0048471,GO:0048511,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0048878,GO:0050663,GO:0050670,GO:0050671,GO:0050673,GO:0050678,GO:0050679,GO:0050704,GO:0050706,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050716,GO:0050718,GO:0050727,GO:0050764,GO:0050765,GO:0050767,GO:0050769,GO:0050776,GO:0050777,GO:0050778,GO:0050786,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050829,GO:0050830,GO:0050831,GO:0050839,GO:0050863,GO:0050864,GO:0050865,GO:0050866,GO:0050867,GO:0050868,GO:0050869,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0050930,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051105,GO:0051106,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051271,GO:0051272,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051384,GO:0051450,GO:0051457,GO:0051480,GO:0051641,GO:0051651,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051861,GO:0051960,GO:0051962,GO:0052547,GO:0052548,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060249,GO:0060255,GO:0060260,GO:0060284,GO:0060326,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060627,GO:0060633,GO:0061041,GO:0061458,GO:0061695,GO:0062012,GO:0062013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070182,GO:0070201,GO:0070302,GO:0070304,GO:0070372,GO:0070374,GO:0070491,GO:0070555,GO:0070603,GO:0070661,GO:0070663,GO:0070665,GO:0070727,GO:0070873,GO:0070875,GO:0070887,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071396,GO:0071637,GO:0071639,GO:0071640,GO:0071642,GO:0071675,GO:0071677,GO:0071702,GO:0071704,GO:0071705,GO:0071706,GO:0071824,GO:0071840,GO:0071897,GO:0071944,GO:0072091,GO:0072341,GO:0072503,GO:0072507,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090025,GO:0090026,GO:0090087,GO:0090130,GO:0090132,GO:0090303,GO:0090304,GO:0090305,GO:0090317,GO:0097100,GO:0097159,GO:0097194,GO:0097350,GO:0097367,GO:0097458,GO:0097708,GO:0098542,GO:0098589,GO:0098657,GO:0098771,GO:0098772,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0099503,GO:0101002,GO:0120025,GO:0120035,GO:0120036,GO:0140097,GO:0140110,GO:0198738,GO:1901222,GO:1901224,GO:1901342,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901652,GO:1901681,GO:1901698,GO:1901700,GO:1901701,GO:1902041,GO:1902042,GO:1902044,GO:1902105,GO:1902106,GO:1902107,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902739,GO:1902741,GO:1903034,GO:1903036,GO:1903037,GO:1903038,GO:1903039,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903532,GO:1903555,GO:1903557,GO:1903670,GO:1903672,GO:1903706,GO:1903707,GO:1903708,GO:1903827,GO:1903828,GO:1904018,GO:1904813,GO:1904949,GO:1904950,GO:1904951,GO:1905114,GO:1905562,GO:1905564,GO:1990234,GO:1990774,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000142,GO:2000143,GO:2000145,GO:2000146,GO:2000147,GO:2000425,GO:2000426,GO:2000514,GO:2000515,GO:2000778,GO:2000819,GO:2001020,GO:2001022,GO:2001056,GO:2001141,GO:2001198,GO:2001200,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc. protein heterodimerization activity
EggNOG OGs COG5208@1,COG5648@1,KOG0381@2759,KOG1657@2759
EC 2.7.7.7
COG Functional cat. K
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE br01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03021,ko03032,ko03036,ko03400,ko04147
Ec32 ortholog description DPB3 class protein with histone-like transcription factor (NF-YC subunit) and high mobility group domains
Ec32 ortholog Ec-03_001170.1
Exons 8
Model size 1411
Cds size 1128
Stop 1
Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816610.2982593-UTR-L-elsbetiae_contig5713:3210..3493 1622816610.2982593-UTR-L-elsbetiae_contig5713:3210..3493 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5713 3211..3493 -
1691683683.028838-UTR-L-elsbetiae_contig5713:3210..3493 1691683683.028838-UTR-L-elsbetiae_contig5713:3210..3493 Laminarionema elsbetiae ELsaHSoW15 UTR L-elsbetiae_contig5713 3211..3493 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816610.3153992-CDS-L-elsbetiae_contig5713:3493..3617 1622816610.3153992-CDS-L-elsbetiae_contig5713:3493..3617 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 3494..3617 -
1691683683.044843-CDS-L-elsbetiae_contig5713:3493..3617 1691683683.044843-CDS-L-elsbetiae_contig5713:3493..3617 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 3494..3617 -
1622816610.3257802-CDS-L-elsbetiae_contig5713:4247..4345 1622816610.3257802-CDS-L-elsbetiae_contig5713:4247..4345 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 4248..4345 -
1691683683.056079-CDS-L-elsbetiae_contig5713:4247..4345 1691683683.056079-CDS-L-elsbetiae_contig5713:4247..4345 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 4248..4345 -
1622816610.3376188-CDS-L-elsbetiae_contig5713:5115..5299 1622816610.3376188-CDS-L-elsbetiae_contig5713:5115..5299 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 5116..5299 -
1691683683.0646257-CDS-L-elsbetiae_contig5713:5115..5299 1691683683.0646257-CDS-L-elsbetiae_contig5713:5115..5299 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 5116..5299 -
1622816610.3480191-CDS-L-elsbetiae_contig5713:5913..5990 1622816610.3480191-CDS-L-elsbetiae_contig5713:5913..5990 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 5914..5990 -
1691683683.0799072-CDS-L-elsbetiae_contig5713:5913..5990 1691683683.0799072-CDS-L-elsbetiae_contig5713:5913..5990 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 5914..5990 -
1622816610.358889-CDS-L-elsbetiae_contig5713:6190..6292 1622816610.358889-CDS-L-elsbetiae_contig5713:6190..6292 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 6191..6292 -
1691683683.090796-CDS-L-elsbetiae_contig5713:6190..6292 1691683683.090796-CDS-L-elsbetiae_contig5713:6190..6292 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 6191..6292 -
1622816610.370573-CDS-L-elsbetiae_contig5713:7603..7678 1622816610.370573-CDS-L-elsbetiae_contig5713:7603..7678 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 7604..7678 -
1691683683.1073678-CDS-L-elsbetiae_contig5713:7603..7678 1691683683.1073678-CDS-L-elsbetiae_contig5713:7603..7678 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 7604..7678 -
1622816610.382029-CDS-L-elsbetiae_contig5713:7783..8019 1622816610.382029-CDS-L-elsbetiae_contig5713:7783..8019 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 7784..8019 -
1691683683.1225853-CDS-L-elsbetiae_contig5713:7783..8019 1691683683.1225853-CDS-L-elsbetiae_contig5713:7783..8019 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 7784..8019 -
1622816610.392234-CDS-L-elsbetiae_contig5713:9051..9283 1622816610.392234-CDS-L-elsbetiae_contig5713:9051..9283 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 9052..9283 -
1691683683.1371562-CDS-L-elsbetiae_contig5713:9051..9283 1691683683.1371562-CDS-L-elsbetiae_contig5713:9051..9283 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5713 9052..9283 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5713.14101.1
>prot_L-elsbetiae_contig5713.14101.1 ID=prot_L-elsbetiae_contig5713.14101.1|Name=mRNA_L-elsbetiae_contig5713.14101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=376bp
MAGPPLMTSSNVDTQKEKDKAEEQPCPKRRRTSIDDSNNSEEQVEPGHEA AGGAPAEGDGGELVSFCARVVYQDSPNEAEAVAAAETLGEGEQDGDEEAR RDGARESEINEEEEEEEEKEEEQEEEEEDAEEEEEEEEEEEGEGESEDRD DLGNGKDKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSA MWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGP TSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIG RQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGAR ADQAKKAAAAMPKGAKPITSFFQKA* back to top mRNA from alignment at L-elsbetiae_contig5713:3211..9283-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5713.14101.1 ID=mRNA_L-elsbetiae_contig5713.14101.1|Name=mRNA_L-elsbetiae_contig5713.14101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6073bp|location=Sequence derived from alignment at L-elsbetiae_contig5713:3211..9283- (Laminarionema elsbetiae ELsaHSoW15)ATGGCTGGACCTCCGCTGATGACCTCTTCCAACGTGGACACGCAGAAGGA
GAAAGACAAGGCGGAAGAACAGCCTTGCCCCAAGCGAAGGAGAACATCGA
TCGACGATTCAAACAACAGCGAGGAACAGGTAGAGCCAGGACACGAGGCA
GCAGGAGGGGCGCCAGCAGAGGGTGATGGAGGTGAGTTGGTTTCATTCTG
TGCGAGGGTAGTATACCAGGATAGCCCAAATG GTGAGGCTGAGAACCCGC
TTCCTGCTAACTTTTTTTTAAATGGCTTTTGGAAAGCACAGCAGCAGCGC
CCGCAGTGCCGAGAAATCAAAAGTGTGGACTGAAGATGTTGAACTGCGGA
GAAGGGGTCGATTGTCTGAGGAGAGAGCCAGCGAGTCAGAGACCCAGAGA
CATAAGTCGAGAGATTTTACGCGTGGTGGGTGCTCACTACCGCTATGTCG
ATGTAGATCAAATAGCCCGCATTCAACCAGGGCAAAACAGAGTGCGCGTA
GTGAGTGTTCGTTTGGGCGGGAGGCGCGCTTGCTGCCGTGTGTTTTTGCA
CCGGGCACATGAGAACATGTAACGGGGAAGACTTCAGTGCATCGCATTTT
GTCTTATTGCAGTGTCGAAGGATGCGCGTGGAACCTGTATTGCTGCGGCG
TTTGCGGTGTACAATGGATTTCTAGGCCGAAGTACATCGCATGACGGCAG
TAGATAAGCAGTCTACCTACGTAGAGCTGTCGCCAAAATAAATGGGAAGG
ACACACACACACACACACACTACCCTAGAGCTATGGGAAAGACACACACA
CACACACACACTACCCTAGAGCTAGATTACCTTACCCTCATGGATGGTGG
GGAGGGCATATTGCATCGGCGTCGACCGCCCCCGCCGCCGACAGGGCGCG
AGAAATCGATCCACGTGCTTCTGGGCTACAGAGTCACTGCAGTAGTATCC
CCGCTGATCTCAACTACTACTGAAGTATATCTCCAAAGAGGAAAGGAGGG
GCATCGAAAACCGGCACCATCGCCCCCAAAGAAACCGTGTCCGGTGTACA
GCAGTGGTGCTGTTGCGGTCAGGTCCCGCCAGTCTGGGGAAGGGCGCAAC
AGCACACGTGCATCTCAATTGCGTGTGGTAGCACCGTGTGGGGCGTGTTT
TCAAGGTGGTGTGTGTTTTGACCCCGTTTTCCGCGGCGGGCCTCCCCCCC
CCTGCTCGCTTCGTTCGCTTCACGACGACCGCAGCGGCGGCGGCGGCGGC
AGAGGCAGAGGCAGAGGCGGAAGCAGTAGCGGCAGCGGAGACGCTGGGCG
AAGGCGAGCAAGACGGTGACGAAGAGGCGCGTCGAGATGGAGCAAGAGAA
TCCGAGATCAATGAAGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAACA
GGAGGAGGAGGAAGAAGACGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGGCGAGGGCGAGAGCGAAGATCGGGACGACCTTGGGAATGGGAAA
GTCGGCGGAATGGCGGAGACTGCGGAGGTCGGCGGCGAAGGGGGGGCAGG
GGCAGCGGGGGGGGGCGCACCATCACCGGGGGGCGAGGGCGAGGGCGGCG
ACGAGGACAAGCCGGACGGAAGCAAGATAGCCAGGGCGCGGTCGGCGTGG
ATGCTCTTCCTCGCGGACAACAGGGAGGGG GTGAGTTTGGTTCGATCGGC
TCCGGGGGTGTCGGTGTGAGCAAACACGGGCCACGCTTTTGTTTGGAGAA
AATGCCGCCGACGGCCATGGTGACAACGTGGTGGTGGTGGTGGTGCTGCT
GCTGCTCACAGCGAACAATTTCTGGGAAGCCCCTTAAGTTTGTTTCCAAC
CATTCGCCGGGAGCACCGCCACGCTCTCTCCCGAACAACCCTGACGACCA
GACCGACATAGTCTCGGACCTCACGGCCTATCCTATGGCCTACCTGCTAT
CCCGCCTCATGGGGGGGGGGCACTCTCGAGACGGGGCAGAGACAAGGCCA
TCGCTCCACACACACACCACCACATGCCCATACATACATCGCAGGAGGGG
GTCCAACCTCCCCCACCCCAATGCCCGCACAACATTGGCACTCTAGCTAG
GCTAGTCGTAGTGGAGGGGGGCCAGTGGGGCAGACGACAAATATGTCAAT
AATGGGAGGGGAAATCAAGAAGAAAAAAACTACATATCGTAATCATGCGA
AGGTTCGCACCCCCGTGTTAGCGTTGTTCTATAGCTTATTTATCCACAAC
CAGGAGGGTACCACTGCCGAAAAGGGTGGTTTTCGAAACGTCTCGTCGGG
GGCTTTCCAGAGAGGCATCAGTTAGTGTTCGCACCCTCCTGGTTGTGGAG
AAATACCCTTTAGAAAAATGCTAACACGGGGGTGCGAACCTTCGCATGAT
AACGGTACATCGTACATTTATGCCTCCAGCCTTTCGTTATATCCACTCCA
ATCTTCGTGTCACACTCTTCTCTCGCTGTCGTTCCTTTGTGGCACACTCA
ACTCTCTGCTGCCGTGCTGTTTATTTTTCGGGGGGGATAATGGGGAAATC
CGCAAAGGGGAGGCGGGGGGGGGGGCTATCGGTGCCGGATGCCGGCGGGG
CGTGAGGTGATGCAGCCAGTCGTGCTTGGGCTTTTCGGAAAGCGCTGCAA
TTGATGCAAGCTGCGAAACGTCTCCATTTTACTTTATTTAGTTTTTCGAC
GTCACATCAGCGGTCTAAATTGCGGCCAACCTGGAAAAAAAAAAAAACGT
TCCAGGGGGACTGCAGACACGCTTGTACATACATAACCCCCCCCTTCAAA
TATCCACCCCCCTTTCTTTTTTCCCCCCATCATTCCTTTTTTTTCTTTTT
TTTCTCCTTTTTTTTCAATTTTGCTGTATACAAACATCAACAGTCTACGT
CCAGTCTGAGAAAAAGCCGTTCGGGAGAGACTGTTGTAGGCATACCATGT
AACACCCCTTTTTCTCTTGACTTGTTTTGCGACCTGGGAAGGTCCGAAAG
GAGCACCCGGGCCTGGCCGTGGGGCCCATGCAGAAGATCCTCAGCGCGAT
GTGGAAAGGCCTCGGGGAAGATGAGGTCGCCCGCTACGCCAAG GTGCGTG
GGCGCGCTTGTGTCTCTCTTTCCTCTCTTTCCGTTCCGTGCCTTTTCGTG
TATGCATGTAGGTACGACGTACAACATATTTCCTTCTTTTTTTTTTTGTC
CCCGCGTTTTCGCTGATGATCGATCCTCTCGACGCCCCTTCGCCTCGCTC
GCCGCGTTGCCGATCCGCCGGGTGGTTTGTCTTTTTTGCGCAGCTGGCGG
TGGAGGACAAGGAGAGAATGAAGAACGAGCTCGCGGCGGCGGGGCTGACC
AAGTTTCCGGCCAAGAATAG GTAAGCATCGCGTATTGTAGTGTGATGTTT
GATACCGTTTGTACCGTGTCCCTCGGACGAGTTTTCAAAGGTACCTCCGC
GATTGATCCATAGGCGGGACTATGGCGTCGCTTCCCACAAAAGTGGCACA
AGAAGTATCTAGTCGATACCCTCCTTTCCGACGGCAAACGCACCGGACAG
CATCGGCATCCGAGAACCCCTCCCCCCCCCCGTTGCGGATATGACCCCTG
CGAGGCCACCTTGCCTCTATTTTTTTAGCGATGTTAAAGAGTAAGTGTGC
GTTTTGTATGTGCATATATCTAGGGGGAAAGTATGATTCATGATCAACGC
TTGTTACCCCCCCCCTCCCCCCCCGATGCATTGATAATGCAGCCACGAGG
CGGGGTGGCAACAAGCGTCAAGCGTACGAACACACTTAAACCCTACAGTA
CCATAATAACATATACTGGAAAACGTTTAGTTACCCTTACCGAAAATCCG
ACCACATCTCTAAAGACCCTCCCGCCCCTTCCGGAATCGGCCATTTCGAA
GTGGTCTGCATCCAACCCTGCACCCCCGGTGACCCCTTGCCCGCCCCTCC
TTGCCGTATTGCGCGCTGTGGTGTGCCTGTGCAGCTCCGCCGCGTCGGTG
CCGGGAGGGCCGACGAGCCTGGTGCTGCCTCTCGCTAGAGTTCGCAAGGC
CGTGCGCCTCGACCCGTCGGTGGGCAACATCTCCAAGGAAGGGCTGCTGC
TCATGACCAAGGCCACGGAGGTGTTCATGAGTTTCATGGCGGACCACGCG
TGGAAGATCGGGAGACAG GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGCGTGCGTGCCTGTGTGTGCCTGTGTGCGTGT
TGGGTGTCGCGAATTTGCGATGATGACGAGAAACGGTGTTTTTCTAATTT
GGCGTCGACCGCGCCATACACATGTAGCCAAACGGTTGACGTATCAAAAG
ACGTCATCCTTTTAGCGGGCCAAAAAAACGTACAGCGCTTTCCTATGTGT
CGGGACCCCTCGATAAAGGGGGTGTGTGCGTGTGTGTCTGTTGCAGTGTT
TCCCGGCGTGTTGTAGGGTTGGTTTGGGGCAGCCTGTGCGTGTGCAGCAA
CAACAATCCAGAAATAGTGTGTGGCATTGAAATCCATCTCAACAAGAATG
CGTACGCAGGTCAAACAGTGAATGTATGGCTCACGCCGACAACGCGAAGA
GAGTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG
CCCGCCGCCCCCCCCCCCCCCCCCACACACGCTTGTGGGGCTGAGAGCGN
NNNNNNNNNCATCTCAACAAGAAGGCGGACGGGGGTCAAACAGTGAATGT
ATGGCCCCCGCCGACAACGGGAAGAGGGTCCCCCCCCCCCCCCCCCGCGC
GCGCGCCATCTACCTGGTACCTGGTACGCGTCACCCCTTCATCTCGAAAA
GGATGTGTGGGTCAAATAGTGGCTCACGGCGAGCAACGCATCGAGCACCT
CTCCCCCCTCCCGCCTGATACGCGTCACACCTTCCCAGACCGGGCGCAAG
TCCATTCGGCCCTGCGATGTTGCGGACTTCGTGTTTGCGGCCCCGGAGAT
GTACTGGCTCAAGGACGAATTCCGCGAGGAGCGCAG GTGCGGGATGTGGG
CGTGTTTGGCTCTAAATTTACAAACCGGGCCCGCGCTTAGACCCCCTAGC
GCAGGTGCGGGATGTGGGCGTGTTTGGCTCTAAATTTACAAACCGGGCCC
GCGCTTAGACCCCCTTTTACGCCTGGGGATCACAGCTTCTTTGGTTGAGA
ATGCCTGTCGGGGTTAAAAAAACAGCCGGGAAGCCGAGTGGGTCAGGTGC
ACTACTGTTTATGCTTGGCGCACAGGCTTAGAGGCACAGCTTGGCAAGGC
GTGTGGGTGAATTTCACGTGAAGTCGTTTTGGTTGTGTCTGGGGCAGGCG
TGTGTGAGCCGTCTATGTTCGGAAAACACTGGTCTACGCATCCACCACCC
CAATAAGTAAATGTGTTCGGAATGGTCTAAACACGGGTCCACCACCTCAA
TAAATGTTCGGAAAACACTGGTCTACGCGTCCACCAACTCAATAAATGTT
CGGAAAACACTGGTCTACGCGTCCACCACCTCAATAAATGTGTTTGGAAA
CCTCTGGTCTATGCGTCCACCACCTCAATAAATGTGTTTGGAAACCACTG
GTCCAAATACAGGTCCACCACCTCAACGAAAGTCCCCCCACTAATGCCGC
TTTTTCGTTTCCGCAGCTCTGTGAAGAAGAGGCAAAGCAAGCCCGAGGTG
AGCGGCGCAAGGGCGGACCAAGCGAAGAAGGCAGCGGCCGCCATGCCCAA
GGGGGCGAAGCCCATCACCTCCTTCTTCCAGAAGGCATGA CTCGACCTTC
CGGAAGGCTTGATGTCGAAGCGCCGGTCCTTCTGCTGCTGCTGATGGCGA
CGATGATGCTGTGATTGTTTCTTGTACCGCTTTGCGCTAGAGCATCTAAC
ATACCGTAGGTGACACAAGATACCACACCCCCTGGACTGGATTTTAGAGG
TCCATTACTCCGTAACGAAGAAGGTGCCAGCACCAAACGAAACATTTTCG
GACAGCCCTCGGCTAGATCTTTCCAACGCTACCCTTTTTGGCACTGGCAC
TCTTCTTGCTGGGGAGGAATCGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5713:3211..9283-
>mRNA_L-elsbetiae_contig5713.14101.1 ID=mRNA_L-elsbetiae_contig5713.14101.1|Name=mRNA_L-elsbetiae_contig5713.14101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2256bp|location=Sequence derived from alignment at L-elsbetiae_contig5713:3211..9283- (Laminarionema elsbetiae ELsaHSoW15) ATGGCTGGACCTCCGCTGATGACCTCTTCCAACGTGGACACGCAGAAGGA GAAAGACAAGGCGGAAGAACAGCCTTGCCCCAAGCGAAGGAGAACATCGA TCGACGATTCAAACAACAGCGAGGAACAGGTAGAGCCAGGACACGAGGCA GCAGGAGGGGCGCCAGCAGAGGGTGATGGAGGTGAGTTGGTTTCATTCTG TGCGAGGGTAGTATACCAGGATAGCCCAAATGATGGCTGGACCTCCGCTG ATGACCTCTTCCAACGTGGACACGCAGAAGGAGAAAGACAAGGCGGAAGA ACAGCCTTGCCCCAAGCGAAGGAGAACATCGATCGACGATTCAAACAACA GCGAGGAACAGGTAGAGCCAGGACACGAGGCAGCAGGAGGGGCGCCAGCA GAGGGTGATGGAGGTGAGTTGGTTTCATTCTGTGCGAGGGTAGTATACCA GGATAGCCCAAATGAGGCGGAAGCAGTAGCGGCAGCGGAGACGCTGGGCG AAGGCGAGCAAGACGGTGACGAAGAGGCGCGTCGAGATGGAGCAAGAGAA TCCGAGATCAATGAAGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAACA GGAGGAGGAGGAAGAAGACGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGG AGGAAGGCGAGGGCGAGAGCGAAGATCGGGACGACCTTGGGAATGGGAAA AGGCGGAAGCAGTAGCGGCAGCGGAGACGCTGGGCGAAGGCGAGCAAGAC GGTGACGAAGAGGCGCGTCGAGATGGAGCAAGAGAATCCGAGATCAATGA AGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAACAGGAGGAGGAGGAAG AAGACGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCGAGGGC GAGAGCGAAGATCGGGACGACCTTGGGAATGGGAAAGACAAGCCGGACGG AAGCAAGATAGCCAGGGCGCGGTCGGCGTGGATGCTCTTCCTCGCGGACA ACAGGGAGGGGGACAAGCCGGACGGAAGCAAGATAGCCAGGGCGCGGTCG GCGTGGATGCTCTTCCTCGCGGACAACAGGGAGGGGGTCCGAAAGGAGCA CCCGGGCCTGGCCGTGGGGCCCATGCAGAAGATCCTCAGCGCGATGTGGA AAGGCCTCGGGGAAGATGAGGTCGCCCGCTACGCCAAGGTCCGAAAGGAG CACCCGGGCCTGGCCGTGGGGCCCATGCAGAAGATCCTCAGCGCGATGTG GAAAGGCCTCGGGGAAGATGAGGTCGCCCGCTACGCCAAGCTGGCGGTGG AGGACAAGGAGAGAATGAAGAACGAGCTCGCGGCGGCGGGGCTGACCAAG TTTCCGGCCAAGAATAGCTGGCGGTGGAGGACAAGGAGAGAATGAAGAAC GAGCTCGCGGCGGCGGGGCTGACCAAGTTTCCGGCCAAGAATAGCTCCGC CGCGTCGGTGCCGGGAGGGCCGACGAGCCTGGTGCTGCCTCTCGCTAGAG TTCGCAAGGCCGTGCGCCTCGACCCGTCGGTGGGCAACATCTCCAAGGAA GGGCTGCTGCTCATGACCAAGGCCACGGAGGTGTTCATGAGTTTCATGGC GGACCACGCGTGGAAGATCGGGAGACAGCTCCGCCGCGTCGGTGCCGGGA GGGCCGACGAGCCTGGTGCTGCCTCTCGCTAGAGTTCGCAAGGCCGTGCG CCTCGACCCGTCGGTGGGCAACATCTCCAAGGAAGGGCTGCTGCTCATGA CCAAGGCCACGGAGGTGTTCATGAGTTTCATGGCGGACCACGCGTGGAAG ATCGGGAGACAGACCGGGCGCAAGTCCATTCGGCCCTGCGATGTTGCGGA CTTCGTGTTTGCGGCCCCGGAGATGTACTGGCTCAAGGACGAATTCCGCG AGGAGCGCAGACCGGGCGCAAGTCCATTCGGCCCTGCGATGTTGCGGACT TCGTGTTTGCGGCCCCGGAGATGTACTGGCTCAAGGACGAATTCCGCGAG GAGCGCAGCTCTGTGAAGAAGAGGCAAAGCAAGCCCGAGGTGAGCGGCGC AAGGGCGGACCAAGCGAAGAAGGCAGCGGCCGCCATGCCCAAGGGGGCGA AGCCCATCACCTCCTTCTTCCAGAAGGCATGACTCTGTGAAGAAGAGGCA AAGCAAGCCCGAGGTGAGCGGCGCAAGGGCGGACCAAGCGAAGAAGGCAG CGGCCGCCATGCCCAAGGGGGCGAAGCCCATCACCTCCTTCTTCCAGAAG GCATGA back to top