prot_L-elsbetiae_contig5713.14101.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5713.14101.1
Unique Nameprot_L-elsbetiae_contig5713.14101.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length376
Homology
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 5.200e-122
Identity = 190/220 (86.36%), Postives = 202/220 (91.82%), Query Frame = 0
Query:  157 DKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGARADQAKKAAA-AMPKGAKPITSFFQKA 375
            +KPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILS MWK LGE EVARYAKLA EDKER+KNELAAAGLTK P KNSS+A+V GGPTSLVLPLARVRK VRLDPSVGNISKEGLLL+TKATEVFM+ +ADHAW IGRQTGRKS+RPCDVADFVFAAPEMYWLKDEFREERSSVKK+QS+PE  GA+A  A KA   A+PKGAKPITSFFQKA
Sbjct:  174 EKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGGPTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A6H5K256_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K256_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.510e-26
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 0
Query:  157 DKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKL 216
            +KPD SKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILS MWKGLGE EVARYAK+
Sbjct:  181 EKPDESKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKGLGEAEVARYAKV 240          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A1V9ZYX4_9STRA (HMG box domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX4_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.150e-26
Identity = 76/218 (34.86%), Postives = 119/218 (54.59%), Query Frame = 0
Query:  158 KPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERM---KNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGARADQAKKAAAAMPKGAKPITSFF 372
            K D + +A+ +SA+  FLAD R  V+ E+P   +G +QKIL  +WK L  ++   Y + A+ DKER    K  L   G+   P K   A+        L+LPLARV++ ++ DP VG ISK+ L+++TKATE F+ ++A         + RK+I+  D+   +     + WL+D+F +    V  R S+ +V     ++AK  AA  P+    IT+FF
Sbjct:   42 KDDDTNVAKPQSAYFHFLADKRPQVKAENPNATIGALQKILGTLWKELSAEDKEPYIQKALLDKERYAKAKERLLERGIDIEPEKPEVASE-----DILLLPLARVKRIIQADPDVGKISKDALIVITKATEQFIQYLAAKGQDSAMISKRKTIKDSDLLQVIHGHGSLDWLRDDFPQ----VSSRPSEAKVGSKGNNEAKTEAANGPR----ITTFF 246          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.000e-24
Identity = 79/227 (34.80%), Postives = 124/227 (54.63%), Query Frame = 0
Query:  155 GKDKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERM---KNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFRE--ERSSVKKRQSKPEVSGARADQAKKAAAAMPKGAKP-ITSFFQKA 375
            GKD   G  +++ +SA+  FLA  R  V+ ++PG A+G +QKIL   WK L  +E   Y +LA++DKER    K EL A G+   P K + A+        L LP ARV++ +  D  V  +SK+ L+ +TKATE+F+ ++A   +     + RK+I+  D+   +     + WL+D+F +   RS+V+     P+        AK ++   P G  P I+SFFQ+A
Sbjct:   53 GKDDK-GPLVSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIEPEKTTVASE-----DVLSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVE-----PKA-------AKVSSRTEPSGNAPSISSFFQRA 261          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 3.630e-23
Identity = 56/166 (33.73%), Postives = 96/166 (57.83%), Query Frame = 0
Query:  165 ARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 330
            ++ +SAWMLF+ + RE V++++P +AV   QKI+S +WK L  DE   Y   A +D++R K E A   + K     ++     G  T LV P+ R+ + ++LD  V +++KE   L+ KA E+F S MA  ++ + +   R+ ++  D+ D +    + YW+KD+F
Sbjct:  141 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTN--DEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDF 304          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.680e-22
Identity = 56/166 (33.73%), Postives = 96/166 (57.83%), Query Frame = 0
Query:  165 ARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 330
            ++ +SAWMLF+ + RE V++++P +AV   QKI+S +WK L  DE   Y   A +D++R K E A   + K     ++     G  T LV P+ R+ + ++LD  V +++KE   L+ KA E+F S MA  ++ + +   R+ ++  D+ D +    + YW+KD+F
Sbjct:  248 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTN--DEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDF 411          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A8K1FA27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA27_PYTOL)

HSP 1 Score: 103 bits (258), Expect = 2.480e-22
Identity = 56/167 (33.53%), Postives = 97/167 (58.08%), Query Frame = 0
Query:  166 RARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTS--LVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 330
            + +SA+ LF AD R+ V +E+PGL +G +QK+++A WK L  +E   Y  LAV+DKER + E       + P  N+    V   PT    + PL RV++ ++ DP V  +S+E L+ ++KA+E+F  ++A  +++      ++ I+  DVA  +     + WL+++F
Sbjct:    6 KPQSAYFLFAADKRKTVAQENPGLRIGEIQKLITAQWKELSAEEKEHYTTLAVQDKERYEREKLE-NPVELPEANAQD-GVEDEPTGNVCIYPLGRVKRIIQSDPDVNKVSREALIAISKASELFAQYLATKSYEQTLYNNKRQIKASDVARAIQTTSVLDWLREDF 170          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: G4YKY3_PHYSP (HMG box domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YKY3_PHYSP)

HSP 1 Score: 102 bits (255), Expect = 4.890e-22
Identity = 53/167 (31.74%), Postives = 94/167 (56.29%), Query Frame = 0
Query:  164 IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEF 330
            + + +S+++LF  + R+ V  E+PG  +G +QKI+SA WK L  +E   Y +LA +DKER + EL      +  A+ ++         + + PL RVRK V+ DP VG ISK+ L+ + KA+E+F  F+   +++      ++ ++  DV   +     + WL+++F
Sbjct:    4 VKKPQSSYLLFCNERRKQVMDENPGARIGDIQKIISAQWKELKPEEKEVYVQLAAKDKERYQQELL--DNPQIDAEPTAEGRAAHDSNACIYPLGRVRKIVQSDPDVGKISKDALIAIAKASELFAQFLGTKSYEQALYRNKRQVKASDVTRTIQTTASLDWLREDF 168          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 7.370e-22
Identity = 71/215 (33.02%), Postives = 113/215 (52.56%), Query Frame = 0
Query:  162 SKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLV-LPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERS-SVKKRQSKPEVSGARADQAKKAAAAMPKGAKPITSFFQK 374
            +K+A+  SA+  FLA NR  V  E+PGL +GP+QKILS  W  L  +    +  +A  DKER  N+  +  L        +A  VP    SL+ LP ARV++ +  DP V  +SK+ +L +TKATE+F+ F+A         + RK+++  DV   + +   + WL+D+F E +   V  + SK   + +     + + ++       ITSFF +
Sbjct:   67 TKLAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQS--LMDQGIDIEAAPRVPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATEASPSSSSSAKSKITSFFSR 279          
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Match: A0A2D4BV20_PYTIN (HMG box domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV20_PYTIN)

HSP 1 Score: 102 bits (255), Expect = 9.380e-22
Identity = 54/181 (29.83%), Postives = 102/181 (56.35%), Query Frame = 0
Query:  164 IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSAMWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGPTSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIGRQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKP 344
            + + RSA+ +F  + R+ +   +PGL VG +QK+++A WK L  +E   Y  LA +DKER + E     +   PA   +   V     + + PL RV++ ++ DP V  +S+E L+ ++KA+E+F  ++A  +++      ++ ++  DVA  +   P + WL+D+F + + S   +++KP
Sbjct:    4 VKKPRSAYFIFSGEKRKEITDANPGLRVGDVQKLITARWKELTPEEKXVYLDLAAKDKERYERERLENPVXDAPADVVAPVEVEH---ACLYPLGRVKRXIQSDPDVNKVSREALVAISKASELFAQYLATKSYEQTLFNNKRQVKASDVARAIHTTPVLDWLRDDFPDMKQSAATQKTKP 181          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5713.14101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR0_ECTSI5.200e-12286.36HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5K256_9PHAE1.510e-2691.67HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9ZYX4_9STRA4.150e-2634.86HMG box domain-containing protein n=1 Tax=Thrausto... [more]
A0A1V9ZFH9_9STRA2.000e-2434.80HMG box domain-containing protein n=1 Tax=Achlya h... [more]
D7G2P1_ECTSI3.630e-2333.73HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KV94_9PHAE1.680e-2233.73HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A8K1FA27_PYTOL2.480e-2233.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
G4YKY3_PHYSP4.890e-2231.74HMG box domain-containing protein n=4 Tax=Phytopht... [more]
W4H0Q5_9STRA7.370e-2233.02HMG box domain-containing protein n=2 Tax=Aphanomy... [more]
A0A2D4BV20_PYTIN9.380e-2229.83HMG box domain-containing protein n=1 Tax=Pythium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..150
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 155..358
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 163..233
e-value: 2.6E-14
score: 63.5
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 165..228
e-value: 1.3E-13
score: 51.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 164..232
score: 12.679
IPR009072Histone-foldGENE3D1.10.20.10coord: 251..317
e-value: 3.6E-14
score: 54.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 248..314
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 147..231
e-value: 3.4E-15
score: 58.1
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 155..228
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 255..314
e-value: 7.7E-12
score: 45.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5713contigL-elsbetiae_contig5713:3494..9283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5713.14101.1mRNA_L-elsbetiae_contig5713.14101.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5713 3211..9283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5713.14101.1 ID=prot_L-elsbetiae_contig5713.14101.1|Name=mRNA_L-elsbetiae_contig5713.14101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=376bp
MAGPPLMTSSNVDTQKEKDKAEEQPCPKRRRTSIDDSNNSEEQVEPGHEA
AGGAPAEGDGGELVSFCARVVYQDSPNEAEAVAAAETLGEGEQDGDEEAR
RDGARESEINEEEEEEEEKEEEQEEEEEDAEEEEEEEEEEEGEGESEDRD
DLGNGKDKPDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSA
MWKGLGEDEVARYAKLAVEDKERMKNELAAAGLTKFPAKNSSAASVPGGP
TSLVLPLARVRKAVRLDPSVGNISKEGLLLMTKATEVFMSFMADHAWKIG
RQTGRKSIRPCDVADFVFAAPEMYWLKDEFREERSSVKKRQSKPEVSGAR
ADQAKKAAAAMPKGAKPITSFFQKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR009072Histone-fold
IPR036910HMG_box_dom_sf
IPR003958CBFA_NFYB_domain