mRNA_L-elsbetiae_contig5670.14029.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: D7G4Z5_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Z5_ECTSI) HSP 1 Score: 166 bits (420), Expect = 4.300e-52 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 +DDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG Sbjct: 14 MDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A835YST4_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST4_9STRA) HSP 1 Score: 130 bits (326), Expect = 9.410e-38 Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 +DDH EMR DAQ WAAAAIES ++EK IS+ IK + + KYGPTWHCIVGTDFKA+VTHE+K F+FFYHGKMA CLYKAG Sbjct: 14 MDDHSEMRTDAQAWAAAAIESHAEEKAISKDIKGRMDDKYGPTWHCIVGTDFKAYVTHETKTFMFFYHGKMAICLYKAG 92
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A7S2V5R3_9STRA (Dynein light chain (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5R3_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.090e-36 Identity = 57/79 (72.15%), Postives = 69/79 (87.34%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 +D+HGEM+ DA+N AAAA+E +EK+ISR IK+ F+ KYGPTWHCIVGTDF+AFVTHESKHF+FFY GK+A CLYKAG Sbjct: 53 MDEHGEMKNDAKNVAAAAVEQHQEEKDISRHIKAHFDQKYGPTWHCIVGTDFRAFVTHESKHFIFFYIGKIAICLYKAG 131
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A7S2CIH5_9STRA (Dynein light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIH5_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.010e-32 Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 +D+HGEM+ DA A AIE ++EK IS +IKS F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKAG Sbjct: 38 MDEHGEMKADAHTVAGEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKAG 116
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A7S0SUZ6_9STRA (Dynein light chain n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUZ6_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.270e-30 Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 10 HGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 234 HGEM+ DA + A+ A+E+ +EK+ISR IKS F+ KYGPTWHCIVG+DF+AFVT+ESKHF+FFY GK A CLYK Sbjct: 27 HGEMKNDALSVASTALEANQEEKDISRHIKSFFDQKYGPTWHCIVGSDFRAFVTYESKHFIFFYIGKTAICLYKT 101
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: F0XW00_AURAN (Dynein light chain (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW00_AURAN) HSP 1 Score: 109 bits (273), Expect = 7.590e-30 Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 4 DDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 D+HGEM+ + N AA AIE E E+S+ IK+ F+ KYGPTWHCIVG+DF+A+VTHESK+F+FFY GK A CLYK G Sbjct: 1 DEHGEMKQEVYNLAAYAIEQYVTEMEVSKHIKAHFDQKYGPTWHCIVGSDFRAYVTHESKNFIFFYQGKTAICLYKCG 78
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A482SJR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR4_9ARCH) HSP 1 Score: 105 bits (263), Expect = 2.150e-28 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 19 MRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 234 M+ DA AAA+E+ ++EK+IS+ +K+ F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKA Sbjct: 1 MKHDAFTVVAAALETNTEEKDISKHVKTYFDQKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 72
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A8J2SHI5_9STRA ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI5_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.370e-26 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 VD+HGEM+ +A N AA A+E E EIS+ IK++F+ KYGPTWHCIVG+DFK THE+KHF+FFYHGK A LYK G Sbjct: 300 VDEHGEMKQEAYNLAAYAVEQFVTEMEISKHIKAQFDEKYGPTWHCIVGSDFKLQCTHEAKHFIFFYHGKTAVALYKCG 378
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A7S1YV50_9STRA (Dynein light chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV50_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.320e-24 Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 1 VDDHGEMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 +D+H EM+ DA + A AIES EK+ + IK F+ KYGPTWH IVG+DFKA+ THE+K F FFY GK A C+YKAG Sbjct: 41 MDEHSEMKSDAISVATNAIESHIQEKDQANHIKRAFDAKYGPTWHVIVGSDFKAYGTHEAKTFFFFYVGKAAICMYKAG 119
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Match: A0A0R3UCN8_MESCO (Dynein light chain n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UCN8_MESCO) HSP 1 Score: 94.0 bits (232), Expect = 2.630e-23 Identity = 41/74 (55.41%), Postives = 61/74 (82.43%), Query Frame = 1 Query: 16 EMRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 237 EM+ DA + A+ A+++++ EK+I+ AIK KF+ KYGPTWHCIVG +F ++VTHESKHF++FY G++A L+K+G Sbjct: 29 EMQHDAVDCASEAMQNQTIEKDIAAAIKKKFDSKYGPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKSG 102 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5670.14029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5670.14029.1 >prot_L-elsbetiae_contig5670.14029.1 ID=prot_L-elsbetiae_contig5670.14029.1|Name=mRNA_L-elsbetiae_contig5670.14029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp MRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVback to top mRNA from alignment at L-elsbetiae_contig5670:675..1936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5670.14029.1 ID=mRNA_L-elsbetiae_contig5670.14029.1|Name=mRNA_L-elsbetiae_contig5670.14029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1262bp|location=Sequence derived from alignment at L-elsbetiae_contig5670:675..1936+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5670:675..1936+ >mRNA_L-elsbetiae_contig5670.14029.1 ID=mRNA_L-elsbetiae_contig5670.14029.1|Name=mRNA_L-elsbetiae_contig5670.14029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig5670:675..1936+ (Laminarionema elsbetiae ELsaHSoW15)back to top |