prot_L-elsbetiae_contig559.13909.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig559.13909.1
Unique Nameprot_L-elsbetiae_contig559.13909.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length111
Homology
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BLAST of mRNA_L-elsbetiae_contig559.13909.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.960e-28
Identity = 77/112 (68.75%), Postives = 83/112 (74.11%), Query Frame = 0 
Query:    1 MRVVEFESAMHDNAGGGA-TTAAGDPPTAEDSEAFRAIDRTGGDADEAGLRSGDEAAPAPPPLPGSDRPRTERATERIGRLLVTLCREKSAGVGEQIKPHLPGLLSLAVSAY 111
            MRVVEFESAM D  GGG  TTAAG         +F A D  GGD DEA   SGDEA P+P    G DRP+T+RATERIG+LLVTLC +KSAGVGEQIKPHLPGLLSLAVSAY
Sbjct:  299 MRVVEFESAMRDGTGGGGGTTAAG---------SFGAGD--GGD-DEA---SGDEARPSPSLPEGDDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAY 395
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BLAST of mRNA_L-elsbetiae_contig559.13909.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.040e-23
Identity = 67/111 (60.36%), Postives = 74/111 (66.67%), Query Frame = 0 
Query:    1 MRVVEFESAMHDNAGGGATTAAGDPPTAEDSEAFRAIDRTGGDADEAGLRSGDEAAPAPPPLPGSDRPRTERATERIGRLLVTLCREKSAGVGEQIKPHLPGLLSLAVSAY 111
            MRVVEFESAM D  GG                +F A D  GGD +     SGDEA P+P      DRP+T+RATERIG+LLVTLC +KSAGVGEQIKPHLPGLLSLAVSAY
Sbjct:  352 MRVVEFESAMRDGTGG--------XXXXXXXGSFGAGD--GGDDEP----SGDEARPSPSLPEDDDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAY 448
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig559.13909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI42_ECTSI1.960e-2868.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE1.040e-2360.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig559contigL-elsbetiae_contig559:29799..30131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig559.13909.1mRNA_L-elsbetiae_contig559.13909.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig559 29785..30131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig559.13909.1 ID=prot_L-elsbetiae_contig559.13909.1|Name=mRNA_L-elsbetiae_contig559.13909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MRVVEFESAMHDNAGGGATTAAGDPPTAEDSEAFRAIDRTGGDADEAGLR
SGDEAAPAPPPLPGSDRPRTERATERIGRLLVTLCREKSAGVGEQIKPHL
PGLLSLAVSAY
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