prot_L-elsbetiae_contig5538.13832.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5538.13832.1
Unique Nameprot_L-elsbetiae_contig5538.13832.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length213
Homology
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: D7FJN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN7_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 8.250e-102
Identity = 134/218 (61.47%), Postives = 170/218 (77.98%), Query Frame = 0
Query:    1 MVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYYINPCFCPSDGYCKSVLSGDWLDPAXXXXXGKAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEAT------DSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTESMALHLDDGTCY 212
            +VGPSVRWRPVF+SG+L A+V  EYYYLFFA++KVP +WA+    ++ERWDCLQSTKGGKR D+S  ++ INPCFCP   +CK++ SG+W+DP+     G A CW  N  PV+LYIKS RDCTAAQG SC+   PCTPCG+  ++ +++A+      ++A+ GVSRCRSCGAG++  C FV+GEGPYCWKEPGSREVEPCSVCCTE  AL+L+ GTCY
Sbjct:   28 IVGPSVRWRPVFVSGLLVAIVICEYYYLFFAIVKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDINPCFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLN-GTCY 244          
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: A0A836CP84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP84_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.310e-32
Identity = 67/201 (33.33%), Postives = 102/201 (50.75%), Query Frame = 0
Query:   13 ISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYYINPCFCPSD--GYCKSVLSGDWLDPAXXXXXGKAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEATDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTESMALHLDDGTC 211
            ++ +L   +  ++ +++ A +K P  W    +  + RWDCLQS KGGK+         +NPC C       C S+ +G     A     G  +C   +   ++  + + RDC+A QG  C++  PC PC  S +Q +  A   A     RCR CG+ +   C F  GEGPYCW  PGS EV+PC++CC++   L   +G C
Sbjct:   11 LTWLLPVSLLLQFNFVWQAAMKPPPTW----EREVFRWDCLQSPKGGKQWAGDDARDEVNPCLCAPHFKAACHSLETGA---AAACRTDGTVRCRDKSGVKINRLLSAERDCSAGQGRVCSQRSPCLPCEPSKLQQWALAGLDAP----RCRRCGSSNAGNCRFREGEGPYCWVRPGSNEVQPCALCCSDPSELINVNGVC 200          
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: A0A7S2CU36_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU36_9STRA)

HSP 1 Score: 112 bits (280), Expect = 8.000e-26
Identity = 79/249 (31.73%), Postives = 107/249 (42.97%), Query Frame = 0
Query:    1 MVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYY------INPCFCPSDGYCK---SVLSGDWLDPAXXXXXGKAQCWAS-----------------NREPVDLYIKSN-------RDCTAAQGTSCTKEEPCTPCGISAIQAFLEATDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEP------GSREVEPCSVCCTESMALHLDDGT 210
            M G   +WR  F   +L  MV  +YY +F   ++   N+  +  V   RWDCLQSTKGGK    S   +Y      +NPC+C ++  CK    V   +   P       +  C                        V  YI          RDC   Q   CT+++PC+PC +  + AF         GV+RC +C   +  +C FV G GPYCW+ P      GSR+V PC  CCTE    +  DGT
Sbjct:  145 MNGVGSKWRSNFSGSLLLGMVVIQYYSVFMTAMQ---NYPYD-GVEAYRWDCLQSTKGGKI---SRAMFYEGSERALNPCYCHANATCKYKSGVKEYNGSHPLGCPLTDEFTCLEQYAFQAFKTETXXXXXXXXXXKVWPYIAREALDEGFRRDCKKGQAARCTRQDPCSPCELEKVLAF---------GVTRCETCSVFNNGDCNFVPGVGPYCWESPDYDERGGSRKVVPCKQCCTEP---YQKDGT 374          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN7_ECTSI8.250e-10261.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP84_9STRA1.310e-3233.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CU36_9STRA8.000e-2631.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 11..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5538contigL-elsbetiae_contig5538:4799..9707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5538.13832.1mRNA_L-elsbetiae_contig5538.13832.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5538 4759..10052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5538.13832.1 ID=prot_L-elsbetiae_contig5538.13832.1|Name=mRNA_L-elsbetiae_contig5538.13832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=213bp
MVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERW
DCLQSTKGGKRGDNSSGAYYINPCFCPSDGYCKSVLSGDWLDPAVCPKDG
KAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEA
TDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTE
SMALHLDDGTCY*
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