mRNA_L-elsbetiae_contig5538.13832.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5538.13832.1
Unique NamemRNA_L-elsbetiae_contig5538.13832.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: D7FJN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN7_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 9.620e-105
Identity = 143/231 (61.90%), Postives = 181/231 (78.35%), Query Frame = 2 
Query:    2 LLALVAIALSTNIMVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYYINPCFCPSDGYCKSVLSGDWLDPAXXXXXGKAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEAT------DSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTESMALHLDDGTCY 676
            LL LVA+ALS N++VGPSVRWRPVF+SG+L A+V  EYYYLFFA++KVP +WA+    ++ERWDCLQSTKGGKR D+S  ++ INPCFCP   +CK++ SG+W+DP+     G A CW  N  PV+LYIKS RDCTAAQG SC+   PCTPCG+  ++ +++A+      ++A+ GVSRCRSCGAG++  C FV+GEGPYCWKEPGSREVEPCSVCCTE  AL+L+ GTCY
Sbjct:   15 LLTLVALALSANVIVGPSVRWRPVFVSGLLVAIVICEYYYLFFAIVKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDINPCFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLN-GTCY 244
[Close]
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: A0A836CP84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP84_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.990e-31
Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 2 
Query:  110 EYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYYINPCFCPSD--GYCKSVLSGDWLDPAXXXXXGKAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEATDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTESMALHLDDGTC 673
            ++ +++ A +K P  W    +  + RWDCLQS KGGK+         +NPC C       C S+ +G     A     G  +C   +   ++  + + RDC+A QG  C++  PC PC  S +Q +  A   A     RCR CG+ +   C F  GEGPYCW  PGS EV+PC++CC++   L   +G C
Sbjct:   22 QFNFVWQAAMKPPPTW----EREVFRWDCLQSPKGGKQWAGDDARDEVNPCLCAPHFKAACHSLETGA---AAACRTDGTVRCRDKSGVKINRLLSAERDCSAGQGRVCSQRSPCLPCEPSKLQQWALAGLDAP----RCRRCGSSNAGNCRFREGEGPYCWVRPGSNEVQPCALCCSDPSELINVNGVC 200
[Close]
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Match: A0A7S2CU36_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU36_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.940e-25
Identity = 81/261 (31.03%), Postives = 112/261 (42.91%), Query Frame = 2 
Query:   29 STNIMVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERWDCLQSTKGGKRGDNSSGAYY------INPCFCPSDGYCK---SVLSGDWLDPAXXXXXGKAQCWASN--------------------------REPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEATDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEP------GSREVEPCSVCCTE-----SMALHLDDGTC 673
            S+  M G   +WR  F   +L  MV  +YY +F   ++   N+  +  V   RWDCLQSTKGGK    S   +Y      +NPC+C ++  CK    V   +   P       +  C                              RE +D   +  RDC   Q   CT+++PC+PC +  + AF         GV+RC +C   +  +C FV G GPYCW+ P      GSR+V PC  CCTE        L  D+G C
Sbjct:  141 SSRYMNGVGSKWRSNFSGSLLLGMVVIQYYSVFMTAMQ---NYPYD-GVEAYRWDCLQSTKGGKI---SRAMFYEGSERALNPCYCHANATCKYKSGVKEYNGSHPLGCPLTDEFTCLEQYAFQAFKTETXXXXXXXXXXKVWPYIAREALDEGFR--RDCKKGQAARCTRQDPCSPCELEKVLAF---------GVTRCETCSVFNNGDCNFVPGVGPYCWESPDYDERGGSRKVVPCKQCCTEPYQKDGTLLFDDEGYC 383
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5538.13832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN7_ECTSI9.620e-10561.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP84_9STRA1.990e-3134.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CU36_9STRA1.940e-2531.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5538contigL-elsbetiae_contig5538:4759..10052 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue2.6e-80
Seed eggNOG ortholog2880.D7FJN7
Hectar predicted targeting categoryother localisation
EggNOG OGs2CAJ7@1,2STMA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-09_000510.1
Exons7
Model size1024
Cds size639
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816583.7277167-UTR-L-elsbetiae_contig5538:4758..47981622816583.7277167-UTR-L-elsbetiae_contig5538:4758..4798Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5538 4759..4798 +
1691683664.0394151-UTR-L-elsbetiae_contig5538:4758..47981691683664.0394151-UTR-L-elsbetiae_contig5538:4758..4798Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5538 4759..4798 +
1622816583.8149564-UTR-L-elsbetiae_contig5538:9707..100521622816583.8149564-UTR-L-elsbetiae_contig5538:9707..10052Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5538 9708..10052 +
1691683664.1289792-UTR-L-elsbetiae_contig5538:9707..100521691683664.1289792-UTR-L-elsbetiae_contig5538:9707..10052Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5538 9708..10052 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816583.738571-CDS-L-elsbetiae_contig5538:4798..48701622816583.738571-CDS-L-elsbetiae_contig5538:4798..4870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 4799..4870 +
1691683664.0523295-CDS-L-elsbetiae_contig5538:4798..48701691683664.0523295-CDS-L-elsbetiae_contig5538:4798..4870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 4799..4870 +
1622816583.7488022-CDS-L-elsbetiae_contig5538:5277..53341622816583.7488022-CDS-L-elsbetiae_contig5538:5277..5334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 5278..5334 +
1691683664.0620618-CDS-L-elsbetiae_contig5538:5277..53341691683664.0620618-CDS-L-elsbetiae_contig5538:5277..5334Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 5278..5334 +
1622816583.760636-CDS-L-elsbetiae_contig5538:5807..59401622816583.760636-CDS-L-elsbetiae_contig5538:5807..5940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 5808..5940 +
1691683664.073463-CDS-L-elsbetiae_contig5538:5807..59401691683664.073463-CDS-L-elsbetiae_contig5538:5807..5940Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 5808..5940 +
1622816583.7701025-CDS-L-elsbetiae_contig5538:6127..61981622816583.7701025-CDS-L-elsbetiae_contig5538:6127..6198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 6128..6198 +
1691683664.0831792-CDS-L-elsbetiae_contig5538:6127..61981691683664.0831792-CDS-L-elsbetiae_contig5538:6127..6198Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 6128..6198 +
1622816583.7794795-CDS-L-elsbetiae_contig5538:6684..67861622816583.7794795-CDS-L-elsbetiae_contig5538:6684..6786Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 6685..6786 +
1691683664.0941713-CDS-L-elsbetiae_contig5538:6684..67861691683664.0941713-CDS-L-elsbetiae_contig5538:6684..6786Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 6685..6786 +
1622816583.790535-CDS-L-elsbetiae_contig5538:7167..73381622816583.790535-CDS-L-elsbetiae_contig5538:7167..7338Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 7168..7338 +
1691683664.1036472-CDS-L-elsbetiae_contig5538:7167..73381691683664.1036472-CDS-L-elsbetiae_contig5538:7167..7338Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 7168..7338 +
1622816583.8020926-CDS-L-elsbetiae_contig5538:9674..97071622816583.8020926-CDS-L-elsbetiae_contig5538:9674..9707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 9675..9707 +
1691683664.117029-CDS-L-elsbetiae_contig5538:9674..97071691683664.117029-CDS-L-elsbetiae_contig5538:9674..9707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5538 9675..9707 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5538.13832.1prot_L-elsbetiae_contig5538.13832.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5538 4799..9707 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5538.13832.1

>prot_L-elsbetiae_contig5538.13832.1 ID=prot_L-elsbetiae_contig5538.13832.1|Name=mRNA_L-elsbetiae_contig5538.13832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=213bp
MVGPSVRWRPVFISGILGAMVTYEYYYLFFAVLKVPRNWATNMDVAMERW
DCLQSTKGGKRGDNSSGAYYINPCFCPSDGYCKSVLSGDWLDPAVCPKDG
KAQCWASNREPVDLYIKSNRDCTAAQGTSCTKEEPCTPCGISAIQAFLEA
TDSASSGVSRCRSCGAGSTEECTFVLGEGPYCWKEPGSREVEPCSVCCTE
SMALHLDDGTCY*
back to top

mRNA from alignment at L-elsbetiae_contig5538:4759..10052+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5538.13832.1 ID=mRNA_L-elsbetiae_contig5538.13832.1|Name=mRNA_L-elsbetiae_contig5538.13832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5294bp|location=Sequence derived from alignment at L-elsbetiae_contig5538:4759..10052+ (Laminarionema elsbetiae ELsaHSoW15)
GTTGCTGGCGCTTGTGGCTATCGCGCTCTCTACCAACATCATGGTGGGAC
CATCTGTTCGATGGCGGCCGGTCTTCATTTCCGGCATACTCGGGGCAATG
GTCACTTACGAGGTTAGTGGCCAGCGCACCCCGCGTTGCTTTGCCTCCCT
CGCTAGCAGGCGCCAACACCAAATTGTGGCACATGAAGCGAGTCGACCAT
GCGCACTTTTTCTTTTTTCGAGTTCCAGATTTTGATATCAGGGTTTGAGT
GCGCAGAACGTGCCGATTTTCCCCGCCTGCCCTCCCGGACAGATTCATTC
CTGAAGTTGGTCGTGAGCTCCAATTTTGCTTGTTGTGCTGCAAAATCCTC
TGAAAATGTGCCACCAATATCTTACACCTCTTCACGTTTTGTAGCAGGAG
CGGGGGTAACAGGTGCCCCTGCTTCCATTGCCGATAAACCGACGACCACA
TGAAACATGCCCGTTTTTTAACAAACATACATGGGTCCTGCCGGGGTCAC
GATCGCTATCGTCCGGCAGTACTACTACCTCTTCTTTGCTGTGCTTAAAG
TGCCCAGGAACTGGGCCACGAACATGGTGAGTCGCACTACTGCTGTTGTC
GAGATAACGCCAGGATGAAAACAGCTTTCTCGATGTCAAAAATGAGCTAG
TGGTTTCATCTAGGACCTTGGTTGGCTAGAGAGGGTACACGCCCGTCGCC
TTGCGTCACCCCGCCGGGGGCTCCGTGCCAGCCCATGTCCAACCCTAGTC
TCCCCACGGAACATCATTAACCGTGGGACTCTTGACCATTTCTTGCCCAT
ATCTTGCCCCATCACGGCATTAGCGAGTCCGTGAGCGTTGTCTTCTTTTG
TTCAAGCTGCGTGGAACCCTTCAAATGGATGCCCTCAACACAGCTTGGTC
AACTTGTATCTAGCCAATATTGAGCCGTTCGTCCAAAGTGTCGGGTTAGC
CTGAGGGCGATAAGTGGAGTGCGTGCTCTTCGAGCCCAAAAGACGGGCTT
TGGACTCTGACTATTCAAGCGCATCTCTCAACATTCCTTCCCCGCGAAGG
ATGTGGCAATGGAGCGGTGGGACTGTCTGCAAAGCACCAAGGGGGGTAAG
AGGGGGGATAACTCAAGCGGCGCGTACTACATCAACCCGTGCTTTTGTCC
CTCCGACGGCTACTGCAAAAGCGTGTTGTCAGGTGGGAAACGAAAGGCAG
GTCTCATAGCGGTTCCTAGCATCGTCTTCGCCAAACGCTATTTTCGTTCC
TGCGTTGTAGCGATGACGGAGTCTATGGTCTGGCGACTGCAATGTACGTT
CATGCATCCCCACACCCCCCTAGTCTAGTCATCACCCAGACACACACCCC
ATGCAACACCATGTTTTAGGCGACTGGCTGGACCCGGCAGTTTGCCCAAA
GGATGGAAAGGCTCAATGTTGGGCCAGCAACCGAGAGCCGGTGAGAAGTT
GTGTCTCTGCCCCTCGGCTACAAAGATTTGCGTCGGCTACGGGCTCACCT
GTATCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCTTTATTCC
GTGTTGAATGAAGTTATCATAGTGATAGTGGTGGTGTTCGTTTCGTCGGG
CGGTTTCGCATCCAAAACAAGCCCTATTCTGGCCGGCAATGGAAACGTAC
GCCTCTTCCTCATCAAACCTATGTTTTGGCTCAAGACGGCATCCTCAGGG
AACACGCCATTAACACACCCGAGTAGGCTATAAGCAGCGCAACGGACCAG
GGATCAATATTTTGTTCGCGGCCAAGATAACCTCCGTCCAATCCATGGAC
GCCTACTTCTGTCACCCAGACACAGACATGCCGTGTCTTACCCAGAAACA
AACCCTTATCAACCGGCATATATGGGTGCACAGAACCAAAATAGATGAGT
GTGTGTTTTCGTTTCGGACATTTCAGGTGGATCTGTACATAAAGAGCAAC
AGAGATTGCACCGCGGCTCAAGGCACGAGCTGCACGAAGGAGGAGCCTTG
CACGCCGTGCGGCATCTCCGCCATCCAGGTACAGCTGTAGGCCGCATCTC
TCTCGACCCGAACACACTTCGACTCACCTTAGACCCGCGTTAGAAAAAAG
GGAATTGTTTCGTCGTTATGAAGAAGACTGCTGTGCAAGTACGATAGGTG
TCCGCGAGACTGTGACACACCCACTGGCGAAACCGATTCTGGCTTCGGTT
TCCGGGTAGTATAGGCAGGCCGGTGGAGATAGCGAGGTCTCCAGCTCAAG
AGACTAGCCAATCACTAGCGAGGTTTCGCTTTGCGTGGTGGTTCTTGCTG
TCTGCGCGCATGCATGCACTAAATAGACGCACTTTTTGCGCGACTGATAA
ATAATATGTGCGGGGTGCTGGACCAAACAAACCCCAAATCATTGCGTAAC
AACACGAAGGCATTTCTAGAGGCGACGGACAGCGCAAGCTCTGGTGTGTC
GAGGTGTCGAAGCTGCGGGGCGGGCAGCACCGAGGAGTGCACCTTCGTCC
TAGGCGAGGGCCCTTACTGCTGGAAAGAGCCGGGGTCGAGGGAGGTCGAG
CCCTGTTCGGTCTGCTGCACCGAATCCATGGTGAGCTTCGCCGATAAGAA
GGCCGGACGTGGCGTGTAGGATGGTTATTGGAAGCGGGTCTTATTGTTCC
GTGTGCCGCAGCACTCTTCCTGCGTTTCAGCACGCACGCATTACAATATA
CACGCCGAGAAATTTCATGGGCCTTGCATAGACTACATACATATCTGATA
CAATTATTCGGGTCTGCTACCGCGTGTATGTATAAATAGGCTACTTATTT
ATTAACCGTTTTTTTAATTTAAACGTTTGTCGGGGTAGATCCCACCCCAC
CTTCCTCCCTGCCTCCCCCCCCCCCTCTCTCTCTCGGTCCCTGTCTTCTC
CTTCCTGTACCTCCCCATGTAGCTCGATCGGTTGACTAGGGCACCAATGC
CAACTGCCGTAGAAGGAAATGTTCCTCAGTTTGTCTTGGTCGTGTCACCA
CCGCCTCGTCGTTGTTTTGTCGGTGGTGGTGATACGCACTTCATATCCTC
CGCCCCCACCGCCGCCGTGTCAAATGAATCCCGTTTTTCCTGGCTAATAA
CTCAAGGCAAATTAAAATGCTCCTCAGTTTGTCTTGGTCGTGTCATCGCC
GCCTCGTCGTTGTTTTGTCGGTGGTGGTGATACGCACTTCATATTCTCCG
CCCCCACCGCCGCCGTGTCAAAGGAATCCCGTTTTTCCTGGCTAATAACT
CAAGGCAAATTGCTAATCGGTGCTCTACGTCTATGTGCAGTATTGTCAAT
AGCAAGTGGATGACCGCCGCCGTGTCGAAGGGTTGCAATTTGCTTGGCTA
TGATAACTCAGGGCAAATTGCAAATTGGTTCTTACGTGTGTAGCATTGTT
GTAGCAGGTGGATGACGGGTTTGTGGAATACCGTAATATCCTCTGAGCTC
GCCCCCCCCCCCCAAAGCAAAACGCGAAACAAGCACAAAAACCTTGAGAT
AGGCCCGGGGCATATGTTTTTTTTGTTTTGATATTAGTTCGCCCCCCCTG
CCTCGGAGAACGCCCCGGGGTGTTCTGTTTCCACGCTGTTTTGTGCATGC
CCTATGGGGCGTTTAATGTGTTATGTCGACAGTTCGTGCGTATTCACGGT
GCCTACTCGGGCATTCGTTGCGGCTCTCGGCGTTGGCGTTTTTTTTTCTG
CGGGTACCCAAAGAAGGGCCCAGCGATAAAATAGACGCGGCAACAACCAG
CGGGGGAAAGGGACCGGAGGCCATCGAAACGGCGCGCGACGCATGCAAGA
GAGCGGAGGCGGAGGCGGTAGCGCCACATATTGCGGATTGAACTCTTGAT
TAATCTCCCTCCTCCACCCCCTGTAGCATCTTGCAACACCGCCGGGGGAG
CGATGAGGCGTTTGTCTGCCTGGCGTTTTTATGTGTGTTTGTTTGTTTGT
TTGTTTTGTTTGTACTTTCAGCTTGTTTACTGTCCGATGTCCTTTCCCTC
TTAGTGTATCATGGGTGCGGTACGACGGATGGGGAGGACTATGTAGATCG
GTGGCCTGGCCGGCGAGAACCCGGCGCGGAACATCCCGGCATTGTTTGGG
GAACCACGATAGAACCAGGGGGCGTATCCCCCCGCGGTTGATGATGTTGG
CTTGTCCACTTTTGTTTTTCACCTCGCATAGCGTGTAGAGGGGAGCGGAA
GGCTCCGCACTATATGTATCTGATCTTTTGTTTTTTTTGCTTTGTGGGGC
CCTCGGGTCCATTTTATCTATTTTCATTTTTTCAGTAGTCTCTAGATACC
CTTTTAGAGTAAGTTATCCTGTGACCACGGGAATTGACCGCGTCAGTGTT
GGATTAGTACACGGACTCATGGAGGTGTACTGGATAGAGAGATCGGAACG
GTTTTTAATGTGAAGACAACAACAACAACCCACACGTTCGCCACCCCTCG
GACGAGGGTCCGAGCAAATTTAGAAGCAGCATCGTCTTTGTTTTTTATTG
AAGGAGTGTTGCTATCGTTGGCATTCCTTCAACTGAATTATTTTCATCAT
CCCATCGAGGCTCTGTCGCCCCGGGACTTTTTAGCTTTTTAGTGCAAAAA
GATCCTACGCCCCGGGGGGCTTTTCGTCCCGCGGCTTATATTTGTTTTTG
AACAGGATCGCCCCCTCTACCTTTAGATAGCCCCGGGGCGGTTTTTGTAC
CGCTGTACTTGGGTTCGCGCCCCGGGGCGAGCTCAGAGGATGGTACGGTA
GTTTGTCGGGAGCTACATAATGCAAAATGTATGTGACCTACGCAGGATAA
ATGTATGCCTCATCTCCCAACGTATTTAGACTCCCCTCCCCACGCCCCAA
TTTTTGAAAACAATGCTCTTTGTTATTTCCGTATGACTGCTGTCTTTCTG
TGGTGGATTTCGCCAGGCACTGCATCTGGACGACGGCACGTGCTACTGAT
GATAGACCTGGCTGCGTTGCTGTAATCAAAGCTCACACAAAGCTTAGGAT
ACCTACGCGCATGGGCCTGGCCGGCGAAACTCGGAGCGGAACACCCCGGC
AATGTTTGGGGAACCAAGATAGAACCAGGGGGCGTATACCCCCGCGGTCG
GTGATGTTGGCTTGTCCAGTTTTGTTTTCACCTCACACAGCGTGTAGACG
GGAGCGGAGGGCTCCACTATCTGTGTCTTGATTTTTTTATTTTTGTCCTT
TGTGGACCTTTCGGGTCCATTTTATTTATTTCCCTTTTTTTCAGTAGTCT
CTACCCTTTTTAGGGAAAGTTATCCTGTGACCACGGGAATCGAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5538:4759..10052+

>mRNA_L-elsbetiae_contig5538.13832.1 ID=mRNA_L-elsbetiae_contig5538.13832.1|Name=mRNA_L-elsbetiae_contig5538.13832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1278bp|location=Sequence derived from alignment at L-elsbetiae_contig5538:4759..10052+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGGACCATCTGTTCGATGGCGGCCGGTCTTCATTTCCGGCATACT
CGGGGCAATGGTCACTTACGAGATGGTGGGACCATCTGTTCGATGGCGGC
CGGTCTTCATTTCCGGCATACTCGGGGCAATGGTCACTTACGAGTACTAC
TACCTCTTCTTTGCTGTGCTTAAAGTGCCCAGGAACTGGGCCACGAACAT
GTACTACTACCTCTTCTTTGCTGTGCTTAAAGTGCCCAGGAACTGGGCCA
CGAACATGGATGTGGCAATGGAGCGGTGGGACTGTCTGCAAAGCACCAAG
GGGGGTAAGAGGGGGGATAACTCAAGCGGCGCGTACTACATCAACCCGTG
CTTTTGTCCCTCCGACGGCTACTGCAAAAGCGTGTTGTCAGGATGTGGCA
ATGGAGCGGTGGGACTGTCTGCAAAGCACCAAGGGGGGTAAGAGGGGGGA
TAACTCAAGCGGCGCGTACTACATCAACCCGTGCTTTTGTCCCTCCGACG
GCTACTGCAAAAGCGTGTTGTCAGGCGACTGGCTGGACCCGGCAGTTTGC
CCAAAGGATGGAAAGGCTCAATGTTGGGCCAGCAACCGAGAGCCGGCGAC
TGGCTGGACCCGGCAGTTTGCCCAAAGGATGGAAAGGCTCAATGTTGGGC
CAGCAACCGAGAGCCGGTGGATCTGTACATAAAGAGCAACAGAGATTGCA
CCGCGGCTCAAGGCACGAGCTGCACGAAGGAGGAGCCTTGCACGCCGTGC
GGCATCTCCGCCATCCAGGTGGATCTGTACATAAAGAGCAACAGAGATTG
CACCGCGGCTCAAGGCACGAGCTGCACGAAGGAGGAGCCTTGCACGCCGT
GCGGCATCTCCGCCATCCAGGCATTTCTAGAGGCGACGGACAGCGCAAGC
TCTGGTGTGTCGAGGTGTCGAAGCTGCGGGGCGGGCAGCACCGAGGAGTG
CACCTTCGTCCTAGGCGAGGGCCCTTACTGCTGGAAAGAGCCGGGGTCGA
GGGAGGTCGAGCCCTGTTCGGTCTGCTGCACCGAATCCATGGCATTTCTA
GAGGCGACGGACAGCGCAAGCTCTGGTGTGTCGAGGTGTCGAAGCTGCGG
GGCGGGCAGCACCGAGGAGTGCACCTTCGTCCTAGGCGAGGGCCCTTACT
GCTGGAAAGAGCCGGGGTCGAGGGAGGTCGAGCCCTGTTCGGTCTGCTGC
ACCGAATCCATGGCACTGCATCTGGACGACGGCACGTGCTACTGAGCACT
GCATCTGGACGACGGCACGTGCTACTGA
back to top