Homology
BLAST of mRNA_L-elsbetiae_contig5530.13822.1 vs. uniprot
Match:
D7G8Q6_ECTSI (Mediator of RNA polymerase II transcription subunit 20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q6_ECTSI)
HSP 1 Score: 49.3 bits (116), Expect = 7.550e-6
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0
Query: 1 MRFGVNTAAPFVGMKREEGSDYPFAKQ 27
M+ GVN AAPFVGMK+EEG +YPFAKQ
Sbjct: 1 MKHGVNLAAPFVGMKKEEGIEYPFAKQ 27
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5530.13822.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M R F G V N T A A P F V G M K R E E G S D Y P F A K Q V N S R H V L T F V R N A V * 5 10 15 20 25 30 35 40 Expect = 7.55e-6 / Id = 77.78 Sequence D7G8Q6_ECTSI
Match Name E-value Identity Description
D7G8Q6_ECTSI 7.550e-6 77.78 Mediator of RNA polymerase II transcription subuni... [more]
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig5530.13822.1 ID=prot_L-elsbetiae_contig5530.13822.1|Name=mRNA_L-elsbetiae_contig5530.13822.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp MRFGVNTAAPFVGMKREEGSDYPFAKQVNSRHVLTFVRNAV* back to top