mRNA_L-elsbetiae_contig5516.13801.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5516.13801.1
Unique NamemRNA_L-elsbetiae_contig5516.13801.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNC3_ESV1K (EsV-1-159 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC3_ESV1K)

HSP 1 Score: 154 bits (390), Expect = 3.390e-38
Identity = 92/220 (41.82%), Postives = 138/220 (62.73%), Query Frame = 1
Query:  652 QMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISY---TGISTGDVI-IGSLIPETTYVLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKL-GTTTSDVAFVKVGEAVSTDDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            Q++   + + T I AT+ E+ GA SY++ + E  S +T +++   TGI T  ++ I +L  ETTY + L    G GY +  T +  TL N A+NY  S YG+ G +DLSTLD + L  +++VMNDLFATG+K+ + + G   + ++FVK GE  +TDDS+L PF S+ G GQ  T+ LSD ST +V+YD+  +S+ IG      GD  V+DGKK T+ ++
Sbjct:  302 QVSLVLSPRVTRIRATIAEIDGALSYRVVVGEEGSDSTTVTHDDITGIVTDRMVEIKNLQAETTYAVTLYASYGGGYEVVQTSSSQTLANVASNYSVSDYGAAGAYDLSTLDQAELDSVNQVMNDLFATGEKIGVSVSGKKKATLSFVKRGEVTTTDDSVLAPFSSSSGSGQMFTLQLSDASTKTVSYDETTDSITIGDHEYMSGDRFVLDGKKCTILEV 521          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWG3_9PHYC (Putative LamG-like jellyroll protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG3_9PHYC)

HSP 1 Score: 135 bits (341), Expect = 5.300e-32
Identity = 135/447 (30.20%), Postives = 226/447 (50.56%), Query Frame = 1
Query:   13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENA-PAATIGSSSRTVCYWVRVLA---GSNKI---FHAQATHNDFEYRVQFVN-NNSIQFRRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGA-----SSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL--SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVSTD--DS--ILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            +  Y+FND S L  DSS +   L N  GVS V D+  G VA F+   +   L ++ P +  GS +R+   WV+  A   G+N +   + A +T+N F   +     ++ I   R       AY T   W H++  Y G    +Y+DG L  T T +++T+     IG S    +  ++   G + +FR+YD  LSAT++   +                    N ++T   T  S T+V+++ +     SSY+I   E  SG  + S    ++   I+ +L P TTY  +L  S D  + Y L+ ++ VTTL ++ AN + S++ +NGV++ S L+ ++  +L   ++++  TGD + I       + AF  V    +++  DS  IL+ F  + G  Q+ T+ LSD + V +TYDD  NS+ + G T  VG++ ++DGKK++V D+
Sbjct:    5 ILHYQFND-SDLGADSSDSGLDLTN-NGVSLVTDSELGPVASFSNGDSLVLLSSSLPLSITGSGTRSFMLWVKRTAFGSGANPVMWYYGANSTNNRFLGLIDSDRWSSDIWPGRLSGTTDIAYDT---WYHVATTYSGGVTKVYVDGTLEGTRTATLDTSSSNLTIGKSG---TNDTQNFVGLLSNFRVYDTELSATEILEAYE-------------------NDFATLDGTPWS-TLVDLSWSPKSFTSSYRIT-QEVASGGEITSVDATTSTTSIVYNLTPSTTYTFRLYRSTDDVN-YTLDRSEDVTTLDDTPANSNMSIFLTNGVYNFSQLEETTQEILKNHIDEILVTGDSIIID-NDEFDNQAFFAVARGTTSEIPDSKPILLLFNPSKGSSQSATLELSDATNVIITYDDSVNSIVVDGITRFVGETFILDGKKVSVHDV 420          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q6XLW1_9PHYC (FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLW1_9PHYC)

HSP 1 Score: 121 bits (304), Expect = 7.990e-27
Identity = 124/453 (27.37%), Postives = 211/453 (46.58%), Query Frame = 1
Query:   13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGN-FNYFALENAPAATI-GSSSRTVCYWV---------------RVLAGSNKIFHAQATHNDFEYRVQFVNNNSIQFRRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPN-PVPDPSTRF--FNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLG----TTTSDVAFVKVGEAVSTDDS-ILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            + RY       L T++ G+S        VS V+DATYG VAYF+G+  +   +   P   + GS++R V +WV               R   G     H +  + +   RV++  +N   +       T   P    W   ++ YDG+    Y DG L    T   +T  G   +G +  F  G     +G+M DFRIYD ALS  ++ +L A GP+  +   +T +  F QL      +  +++   TV E  GA   ++ +  S +GT   +Y  ++ G V    L  + T    L  + G    + D+ ++T++++  +N            DLS   S  ++ +  +M+  F T D++ +++     TT S   FVK G+++  + + IL PF   G  GQ   + +SD+ST ++ +D+ N+++ I G+   VGD++V+DGK  T+  L
Sbjct:    7 IVRYPMTSVDTLGTNAEGSSYHAT-ATNVSIVSDATYGNVAYFSGDGTSRIDMNTIPTDVLSGSATRGVSFWVNFDEINGNYNVYTQGRASDGLGNFVHVKIGYQNTNVRVEYGVSNVHMWHT-----TTLLPDT--WYMFAMTYDGSVSRTYWDGNLVVEDTTVPDTTAGLVNLGKN--FLYGAD--FKGKMTDFRIYDFALSLENIQSLQADGPSLQIELGATVYPHFAQLTWADNDSNSSSTYDITVSENGGA---EVTVASSVTGTEFSAY-NLNDGSVYDFRLYSDGTV---LGRNLGQATPVIDSTSLTSMSSVLSN------------DLSVFTSDVVSEIQPLMDSSFETNDRIKVRVSVHNSTTVSTTTFVKSGDSIPLNSNYILTPFVPNGSSGQFFNLEMSDSSTKTLEFDESNSTILIDGAAYSVGDTLVLDGKTCTLGSL 428          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWE4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE4_9PHYC)

HSP 1 Score: 119 bits (297), Expect = 3.370e-25
Identity = 76/203 (37.44%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  706 EVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL--SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGV--FDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVSTD--DSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            EV GA+ Y++    SP G      T  ST +    SL  E+ YV ++    D  S Y L    + TTL N ++NY    Y + G   FDLS+ D  ++A   EVMN++F TGD + I +G+ T    FVK+G +V  D   ++L+PF  TGG  Q  ++ LSDNS+V++TYD+   ++ IGG     G+S ++D +KLT+ ++
Sbjct:  447 EVPGATQYRLTKQLSPDGVETTVDTDFSTFEKRAESLQSESVYVFRVYSRTDPESEYTLAYQSSTTTLANVSSNYSAGDYKAEGEDQFDLSSFDKDTMANFHEVMNEVFDTGDAIVIPIGSETKKTKFVKLGGSVPIDGESAVLIPFLETGGSAQTASLTLSDNSSVTLTYDETAGTIGIGGVDYSPGESTIVDSQKLTLVEV 649          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWA1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA1_9PHYC)

HSP 1 Score: 112 bits (281), Expect = 1.070e-23
Identity = 124/452 (27.43%), Postives = 215/452 (47.57%), Query Frame = 1
Query:   13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGN-FNYFALENAPAATI-GSSSRTVCYWVRV--LAGSNKIF---HAQATHNDF-EYRVQFVNNN-SIQF--RRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTY--------VLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVS-----TDDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            V RY  +    L T++   S    +V  VS V D T+GT AYF+G+  +   + + P   + GS+ R++ +WV    ++ +  ++   +A+     F + ++ +   N  +++    N+   T   P    W    + YDG T   Y  G L  T TV++NT  G   +G +    S G +   G+M+DFRIYD  +S+ DV+++FA GP+P+ D +        M  Y  Q +        +VAG S+Y +   E+  G ++++   + +  + +  L   +TY        VL  SVD G    L D+  +  +    +N D +V+ ++ V ++  L   SL   +EV+        +   K  T   +  FV+ GE  S      + SIL PF   G  GQ++++ LSD ST ++T+D++N ++ + G T   GD  V+D +   +  L
Sbjct:    7 VVRYPMSSTDTLGTNAESLSFN-ASVENVSVVADETFGTAAYFSGDGTSRIDMSDIPTEVLAGSAPRSLSFWVNFDEISDNQNVYSQGNAETGEGLFAQVKIGYRGTNVRVEYGSHSNRFFETSLAPNT--WYSFVMTYDGVTSKTYWGGDLVLTQTVTLNTEAGFVNLGQTY---SNGID-FAGKMVDFRIYDVDMSSEDVSSVFADGPSPLLDVAA------VMLPYVAQLSWR------DVAGVSAYDVMYEEN-GGESVVAAESVDSTSLAVYDLKEGSTYNFKFYAGGVLVGSVD-GQTTPLLDSDNLKDMLTLVSN-DLTVFNTDTVSEMQRLMDLSLETNEEVVV-------RFTFKNKTLPLNARFVRDGETFSMSTLGVEGSILTPFIPDGSPGQSLSLELSDLSTTTLTFDEINGTVTVDGVTYSTGDKFVLDDRSCMLGSL 429          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNM5_ESV1K (EsV-1-39 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM5_ESV1K)

HSP 1 Score: 106 bits (264), Expect = 5.490e-21
Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 1
Query:  898 TLTNSAANYDKSVYGSN-GVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKL-GTTTSDVAFVKVGEAVSTDD--SILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTV 1287
            TL N A+N+D S Y    G FDL  L + SL+ LD+V+ND+F+TGD + + L G   +   FVK G+  + DD  SI +PF ++ G GQ++T+ L+D +TV+V YDD   ++ IGG+T   GDS+V+DG+K+T+
Sbjct:  477 TLPNVASNHDVSSYADERGGFDLRGLSTESLSALDDVLNDIFSTGDSVTLSLRGKGETKTKFVKRGDTAAIDDGVSIAMPFSASAGPGQSVTLALTDATTVAVAYDDTTEAVLIGGTTYAAGDSLVLDGQKVTI 610          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q6XM36_9PHYC (FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM36_9PHYC)

HSP 1 Score: 98.6 bits (244), Expect = 2.040e-18
Identity = 68/204 (33.33%), Postives = 113/204 (55.39%), Query Frame = 1
Query:  688 ISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL-SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGS-NGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVST--DDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTV 1287
            I  T   V+GA +Y++    + +   +   TG +     +  L PET Y + L S   G+ Y    T + TTL N ++NY  S + + +G +DLS    SS + L ++   LF+TGD L + +G+      FVKVGE  S   ++++ +PF  T    Q+  + LSDNSTV++++D+ +N++ IGG     G+S ++D +KLT+
Sbjct:  439 IDVTFAAVSGAIAYKLTKKTTTATDEIDVATGFTDLAQRVRDLQPETEYTISLYSSTDGTTYTPAGTASATTLANVSSNYSASDFSNESGKYDLSKFGKSSRSQLFQLAGTLFSTGDNLVVPVGSGNKTTKFVKVGENTSIVGEEALFIPFNETA---QSANITLSDNSTVTLSFDESDNTVEIGGEKYASGESTIVDQQKLTI 639          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K)

HSP 1 Score: 81.3 bits (199), Expect = 1.220e-12
Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  802 IIGSLIPETTYVLQLSVDKGSG--YVLEDTKTVTTLTNSAANYDKSVYGS-NGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSD--VAFVKVGEAVST--DDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296
            I+  L  ETTY ++L    G G  Y L      TT  N A NYD + + S +G +D+S LD S    +   MNDLF+TG  +++ +  +       FVK G  +S   ++++L+PF S+ G  Q+ T+ LSD                IGG +   G S+++DGKK+TV D+
Sbjct: 1040 IVSGLKAETTYTIRLYTAAGLGLEYTLLGQDDCTTYANLAKNYDVADFVSASGAYDISDLDDS----VSSAMNDLFSTGASVEVAINDSKKSRKTTFVKRGGVISVANEEALLLPFDSSSGATQSATITLSDXXXXXXXXXXXXXXXEIGGVSFTHGQSLILDGKKVTVVDI 1207          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: A0A1H1RF39_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=unclassified Gillisia TaxID=2615025 RepID=A0A1H1RF39_9FLAO)

HSP 1 Score: 75.9 bits (185), Expect = 7.040e-11
Identity = 75/304 (24.67%), Postives = 137/304 (45.07%), Query Frame = 1
Query:   10 LVARYKFNDAS-ALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENAPAATIGSSSRTVCYWVRVLAGSNKIFHAQATHNDFE-YRVQFVNNNSIQFRRNQVVHTEAYPTVGQ---------WLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATL--FAGGPNPVPDPSTRF----FNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPS-GTTLISYTGISTGDVIIGSLIPETTYVLQLSVDKGSG 867
            LVA YK N++S A+  D S  +NT   +     VN    G V +     + +A+  A  A   ++S T+  W++    + +    ++ HN  + Y +   ++  I FR NQ      Y    Q         W+H+++ +DGTT N+Y++GVL ++ + S  TA+G   +  +    + G   + G M D RIY+ AL+A +V+ +      P+P   P         N ++++   T  A+          GA +Y I ++ + S  + ++  + +S   + +  L   TTY  ++      G
Sbjct: 1001 LVAHYKMNESSGAMLADDSEIANTATIMGNPVRVNGVEGGAVRF--NGADQYAIAGANLALNLTNSLTIATWIKPEKRATQYVIKKSEHNAIDGYELSLSSSGKIFFRFNQATSNNTYRLNSQASYPIDGITWMHVAVTFDGTTMNLYINGVLDSSKSYSAATALGTNSMTLAIGSGNDGYRGILGAMDDVRIYNVALNAAEVSAIATITSSPSPPEIPLQELPLDLANNVEVDPTLTWNASD---------GALTYNIQVSNNNSFASFILDQSDLSATSIAVSDLTNSTTYYWRVRATNAEG 1293          
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: A0A6M5UFC9_9MICO (Uncharacterized protein n=1 Tax=Cellulosimicrobium sp. BI34T TaxID=2587808 RepID=A0A6M5UFC9_9MICO)

HSP 1 Score: 75.5 bits (184), Expect = 8.990e-11
Identity = 82/277 (29.60%), Postives = 119/277 (42.96%), Query Frame = 1
Query:   10 LVARYKFNDASAL-TTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENAPAATIGSSSRTVCYWVRVLAGSNKIFHAQATHNDFE-YRVQFVNNNSIQFRRN--------QVVHTEAYPTVGQWLHISINYDGTTENIYLDGV--LTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGG---PNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTG 795
            LV  +  ++   L TTDSSG   T  ++ G ST      G+     G+  Y  + ++ A  + ++  TV  W+R    + +    +AT    + Y +   +      R N        +V  T +YPT G W+H+   YDGT   IY+DGV   +     SI     P  IG  P     G   M+G +   R+YD ALSAT+VA LF GG   PNP P          Q    ST   T++S T+       +       SP     ++ TG +TG
Sbjct:  644 LVGAWNLDEGQGLVTTDSSGWGGT-GSLVGASTWVPGVAGSAVRSDGSTGYVRVPDSAALDL-TTRLTVAAWIRPEQRATQYVVKKATQGATDGYELGLASGGKPFLRLNHGASGDTFRVEATSSYPTNGTWMHVVGTYDGTRMRIYVDGVEQASKAGPASIAANALPLGIGAEPN----GYRPMKGAVDGVRLYDRALSATEVAVLFQGGSTQPNPAP--------VAQDLAVSTSLGTAVSGTLAATVPQGTTPRFEVVSPPARGTVALTGTTTG 906          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNC3_ESV1K3.390e-3841.82EsV-1-159 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
B5LWG3_9PHYC5.300e-3230.20Putative LamG-like jellyroll protein n=1 Tax=Feldm... [more]
Q6XLW1_9PHYC7.990e-2727.37FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a ... [more]
B5LWE4_9PHYC3.370e-2537.44Uncharacterized protein n=1 Tax=Feldmannia species... [more]
B5LWA1_9PHYC1.070e-2327.43Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q8QNM5_ESV1K5.490e-2144.78EsV-1-39 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
Q6XM36_9PHYC2.040e-1833.33FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a... [more]
Q8QNC2_ESV1K1.220e-1234.30EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A1H1RF39_9FLAO7.040e-1124.67Por secretion system C-terminal sorting domain-con... [more]
A0A6M5UFC9_9MICO8.990e-1129.60Uncharacterized protein n=1 Tax=Cellulosimicrobium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5516contigL-elsbetiae_contig5516:259..1986 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score84.0
Seed ortholog evalue1.9e-13
Seed eggNOG ortholog1249975.JQLP01000005_gene1651
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
EggNOG OGsCOG3055@1,COG3055@2
COG Functional cat.G
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEsV-1-159 galactose-binding domain-like protein
Ec32 orthologEc-00_006130.1
Exons2
Model size1299
Cds size1296
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5516.13801.1prot_L-elsbetiae_contig5516.13801.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5516 259..1983 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816580.9122353-CDS-L-elsbetiae_contig5516:258..8801622816580.9122353-CDS-L-elsbetiae_contig5516:258..880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 259..880 -
1691683662.0477674-CDS-L-elsbetiae_contig5516:258..8801691683662.0477674-CDS-L-elsbetiae_contig5516:258..880Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 259..880 -
1622816580.9296103-CDS-L-elsbetiae_contig5516:1309..19831622816580.9296103-CDS-L-elsbetiae_contig5516:1309..1983Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 1310..1983 -
1691683662.0628374-CDS-L-elsbetiae_contig5516:1309..19831691683662.0628374-CDS-L-elsbetiae_contig5516:1309..1983Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5516 1310..1983 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816580.9400544-UTR-L-elsbetiae_contig5516:1983..19861622816580.9400544-UTR-L-elsbetiae_contig5516:1983..1986Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5516 1984..1986 -
1691683662.0737739-UTR-L-elsbetiae_contig5516:1983..19861691683662.0737739-UTR-L-elsbetiae_contig5516:1983..1986Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5516 1984..1986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5516.13801.1

>prot_L-elsbetiae_contig5516.13801.1 ID=prot_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp
MSLVARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNF
NYFALENAPAATIGSSSRTVCYWVRVLAGSNKIFHAQATHNDFEYRVQFV
NNNSIQFRRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATV
SINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAG
GPNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGASSYQINITESP
SGTTLISYTGISTGDVIIGSLIPETTYVLQLSVDKGSGYVLEDTKTVTTL
TNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLG
TTTSDVAFVKVGEAVSTDDSILVPFRSTGGVGQAITMNLSDNSTVSVTYD
DVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL*
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mRNA from alignment at L-elsbetiae_contig5516:259..1986-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5516.13801.1 ID=mRNA_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1728bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:259..1986- (Laminarionema elsbetiae ELsaHSoW15)
ACCATGTCTCTGGTCGCCCGTTACAAATTCAATGATGCATCTGCACTAAC TACTGATTCGTCAGGAAACTCGAACACGTTAGTAAATGTTGCCGGTGTCA GTACCGTCAATGATGCGACGTACGGAACAGTGGCCTACTTTACGGGTAAT TTTAACTATTTCGCTCTTGAAAATGCACCAGCGGCAACTATTGGTAGCTC TTCACGGACAGTATGTTACTGGGTACGCGTTTTGGCTGGCAGCAACAAAA TTTTTCATGCACAAGCTACACACAACGATTTCGAGTACAGAGTGCAGTTT GTCAACAATAACAGTATACAGTTCAGGCGTAATCAAGTGGTACACACTGA GGCATACCCTACAGTTGGTCAGTGGTTGCATATCAGTATAAACTACGATG GGACGACGGAAAATATATATCTCGATGGAGTCTTGACCAATACAGCTACC GTGAGTATAAACACAGCGGTGGGCCCCTTCTGGATAGGTAATAGTCCTAA ATTCCCGTCGGGTGGTAGTGAAACGATGGAAGGTGAAATGTTGGATTTCA GGATATACGATGAAGCCCTGTCGGCAACAGATGTGGCGACCTTATTCGCT GGCGGACCCAATCCAGTACCAGATCCCAGTACCAGGTTTTTTAACCAGCT CCAGATGAACAAATATTCCACTCAACAGTTCCAATTCGCAGAGATCGAGA TTTTGGATAGGAATGGTACAAATATCGCGCCGTTAGGTACGGTCTCGGGT TTTACTACTGAGAGTGCGACTATTATTGGACCGGCAGCCTACGCGATCGA CGGGAACACCAATAACATATACAGCAATACTGAACCGTCCACGAACAGTA TTGCAATAGTAAAATCAGAGAATGGGGTTGCAACTCTGACACTTGATCTT GATAGAGACTATGCTTTTACGGAAATCAGAAAGATCATAGTCTACAATCG ATTAGACCACACTGCAACCGAATGGTTCATCGGAGTCGTCATAACTCTAC ACTCGTCGGATGGAGAGGCTCCTGTAGAGATTGGAGTAACGACTGCCGAC CTTATACAGGAGTTTGTCGTCGCACCGGTAATAGACTTTTTGTTGCCCAC CGCGAGAGCGACATCGATCAGCGCTACTGTTGTGGAAGTCGCCGGGGCTT CTTCGTATCAGATCAACATAACGGAGTCTCCCTCTGGAACCACACTTATC TCATATACTGGCATCTCTACCGGTGATGTTATAATAGGTTCATTGATCCC GGAAACGACTTACGTCCTCCAGTTGTCTGTAGACAAAGGGAGCGGGTACG TTCTAGAAGACACGAAAACCGTTACGACTCTGACTAACTCTGCGGCAAAC TATGATAAAAGTGTATACGGTAGCAACGGTGTATTCGATCTAAGTACTCT GGATAGTTCATCGTTGGCCCTACTGGACGAGGTTATGAACGACTTATTTG CCACGGGAGACAAGCTCGATATCAAGCTGGGTACCACTACATCCGACGTG GCATTCGTTAAAGTGGGGGAGGCCGTGTCTACGGATGATTCTATCCTTGT ACCATTCAGGAGTACTGGTGGTGTCGGCCAGGCAATCACGATGAACCTTT CCGATAATTCTACGGTATCAGTGACTTATGACGATGTGAACAATTCCCTG AATATCGGTGGATCAACCGTTCAAGTGGGAGACAGTATCGTCATCGACGG AAAAAAGTTAACCGTCAAGGATTTGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5516:259..1986-

>mRNA_L-elsbetiae_contig5516.13801.1 ID=mRNA_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:259..1986- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTCTGGTCGCCCGTTACAAATTCAATGATGCATCTGCACTAACTAC
TGATTCGTCAGGAAACTCGAACACGTTAGTAAATGTTGCCGGTGTCAGTA
CCGTCAATGATGCGACGTACGGAACAGTGGCCTACTTTACGGGTAATTTT
AACTATTTCGCTCTTGAAAATGCACCAGCGGCAACTATTGGTAGCTCTTC
ACGGACAGTATGTTACTGGGTACGCGTTTTGGCTGGCAGCAACAAAATTT
TTCATGCACAAGCTACACACAACGATTTCGAGTACAGAGTGCAGTTTGTC
AACAATAACAGTATACAGTTCAGGCGTAATCAAGTGGTACACACTGAGGC
ATACCCTACAGTTGGTCAGTGGTTGCATATCAGTATAAACTACGATGGGA
CGACGGAAAATATATATCTCGATGGAGTCTTGACCAATACAGCTACCGTG
AGTATAAACACAGCGGTGGGCCCCTTCTGGATAGGTAATAGTCCTAAATT
CCCGTCGGGTGGTAGTGAAACGATGGAAGGTGAAATGTTGGATTTCAGGA
TATACGATGAAGCCCTGTCGGCAACAGATGTGGCGACCTTATTCGCTGGC
GGACCCAATCCAGTACCAGATCCCAGTACCAGGTTTTTTAACCAGCTCCA
GATGAACAAATATTCCACTCAACAATGTCTCTGGTCGCCCGTTACAAATT
CAATGATGCATCTGCACTAACTACTGATTCGTCAGGAAACTCGAACACGT
TAGTAAATGTTGCCGGTGTCAGTACCGTCAATGATGCGACGTACGGAACA
GTGGCCTACTTTACGGGTAATTTTAACTATTTCGCTCTTGAAAATGCACC
AGCGGCAACTATTGGTAGCTCTTCACGGACAGTATGTTACTGGGTACGCG
TTTTGGCTGGCAGCAACAAAATTTTTCATGCACAAGCTACACACAACGAT
TTCGAGTACAGAGTGCAGTTTGTCAACAATAACAGTATACAGTTCAGGCG
TAATCAAGTGGTACACACTGAGGCATACCCTACAGTTGGTCAGTGGTTGC
ATATCAGTATAAACTACGATGGGACGACGGAAAATATATATCTCGATGGA
GTCTTGACCAATACAGCTACCGTGAGTATAAACACAGCGGTGGGCCCCTT
CTGGATAGGTAATAGTCCTAAATTCCCGTCGGGTGGTAGTGAAACGATGG
AAGGTGAAATGTTGGATTTCAGGATATACGATGAAGCCCTGTCGGCAACA
GATGTGGCGACCTTATTCGCTGGCGGACCCAATCCAGTACCAGATCCCAG
TACCAGGTTTTTTAACCAGCTCCAGATGAACAAATATTCCACTCAACAAG
CGACATCGATCAGCGCTACTGTTGTGGAAGTCGCCGGGGCTTCTTCGTAT
CAGATCAACATAACGGAGTCTCCCTCTGGAACCACACTTATCTCATATAC
TGGCATCTCTACCGGTGATGTTATAATAGGTTCATTGATCCCGGAAACGA
CTTACGTCCTCCAGTTGTCTGTAGACAAAGGGAGCGGGTACGTTCTAGAA
GACACGAAAACCGTTACGACTCTGACTAACTCTGCGGCAAACTATGATAA
AAGTGTATACGGTAGCAACGGTGTATTCGATCTAAGTACTCTGGATAGTT
CATCGTTGGCCCTACTGGACGAGGTTATGAACGACTTATTTGCCACGGGA
GACAAGCTCGATATCAAGCTGGGTACCACTACATCCGACGTGGCATTCGT
TAAAGTGGGGGAGGCCGTGTCTACGGATGATTCTATCCTTGTACCATTCA
GGAGTACTGGTGGTGTCGGCCAGGCAATCACGATGAACCTTTCCGATAAT
TCTACGGTATCAGTGACTTATGACGATGTGAACAATTCCCTGAATATCGG
TGGATCAACCGTTCAAGTGGGAGACAGTATCGTCATCGACGGAAAAAAGT
TAACCGTCAAGGATTTGTAAAGCGACATCGATCAGCGCTACTGTTGTGGA
AGTCGCCGGGGCTTCTTCGTATCAGATCAACATAACGGAGTCTCCCTCTG
GAACCACACTTATCTCATATACTGGCATCTCTACCGGTGATGTTATAATA
GGTTCATTGATCCCGGAAACGACTTACGTCCTCCAGTTGTCTGTAGACAA
AGGGAGCGGGTACGTTCTAGAAGACACGAAAACCGTTACGACTCTGACTA
ACTCTGCGGCAAACTATGATAAAAGTGTATACGGTAGCAACGGTGTATTC
GATCTAAGTACTCTGGATAGTTCATCGTTGGCCCTACTGGACGAGGTTAT
GAACGACTTATTTGCCACGGGAGACAAGCTCGATATCAAGCTGGGTACCA
CTACATCCGACGTGGCATTCGTTAAAGTGGGGGAGGCCGTGTCTACGGAT
GATTCTATCCTTGTACCATTCAGGAGTACTGGTGGTGTCGGCCAGGCAAT
CACGATGAACCTTTCCGATAATTCTACGGTATCAGTGACTTATGACGATG
TGAACAATTCCCTGAATATCGGTGGATCAACCGTTCAAGTGGGAGACAGT
ATCGTCATCGACGGAAAAAAGTTAACCGTCAAGGATTTGTAA
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