mRNA_L-elsbetiae_contig5516.13801.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNC3_ESV1K (EsV-1-159 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC3_ESV1K) HSP 1 Score: 154 bits (390), Expect = 3.390e-38 Identity = 92/220 (41.82%), Postives = 138/220 (62.73%), Query Frame = 1 Query: 652 QMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISY---TGISTGDVI-IGSLIPETTYVLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKL-GTTTSDVAFVKVGEAVSTDDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 Q++ + + T I AT+ E+ GA SY++ + E S +T +++ TGI T ++ I +L ETTY + L G GY + T + TL N A+NY S YG+ G +DLSTLD + L +++VMNDLFATG+K+ + + G + ++FVK GE +TDDS+L PF S+ G GQ T+ LSD ST +V+YD+ +S+ IG GD V+DGKK T+ ++ Sbjct: 302 QVSLVLSPRVTRIRATIAEIDGALSYRVVVGEEGSDSTTVTHDDITGIVTDRMVEIKNLQAETTYAVTLYASYGGGYEVVQTSSSQTLANVASNYSVSDYGAAGAYDLSTLDQAELDSVNQVMNDLFATGEKIGVSVSGKKKATLSFVKRGEVTTTDDSVLAPFSSSSGSGQMFTLQLSDASTKTVSYDETTDSITIGDHEYMSGDRFVLDGKKCTILEV 521
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWG3_9PHYC (Putative LamG-like jellyroll protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG3_9PHYC) HSP 1 Score: 135 bits (341), Expect = 5.300e-32 Identity = 135/447 (30.20%), Postives = 226/447 (50.56%), Query Frame = 1 Query: 13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENA-PAATIGSSSRTVCYWVRVLA---GSNKI---FHAQATHNDFEYRVQFVN-NNSIQFRRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGA-----SSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL--SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVSTD--DS--ILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 + Y+FND S L DSS + L N GVS V D+ G VA F+ + L ++ P + GS +R+ WV+ A G+N + + A +T+N F + ++ I R AY T W H++ Y G +Y+DG L T T +++T+ IG S + ++ G + +FR+YD LSAT++ + N ++T T S T+V+++ + SSY+I E SG + S ++ I+ +L P TTY +L S D + Y L+ ++ VTTL ++ AN + S++ +NGV++ S L+ ++ +L ++++ TGD + I + AF V +++ DS IL+ F + G Q+ T+ LSD + V +TYDD NS+ + G T VG++ ++DGKK++V D+ Sbjct: 5 ILHYQFND-SDLGADSSDSGLDLTN-NGVSLVTDSELGPVASFSNGDSLVLLSSSLPLSITGSGTRSFMLWVKRTAFGSGANPVMWYYGANSTNNRFLGLIDSDRWSSDIWPGRLSGTTDIAYDT---WYHVATTYSGGVTKVYVDGTLEGTRTATLDTSSSNLTIGKSG---TNDTQNFVGLLSNFRVYDTELSATEILEAYE-------------------NDFATLDGTPWS-TLVDLSWSPKSFTSSYRIT-QEVASGGEITSVDATTSTTSIVYNLTPSTTYTFRLYRSTDDVN-YTLDRSEDVTTLDDTPANSNMSIFLTNGVYNFSQLEETTQEILKNHIDEILVTGDSIIID-NDEFDNQAFFAVARGTTSEIPDSKPILLLFNPSKGSSQSATLELSDATNVIITYDDSVNSIVVDGITRFVGETFILDGKKVSVHDV 420
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q6XLW1_9PHYC (FirrV-1-E1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLW1_9PHYC) HSP 1 Score: 121 bits (304), Expect = 7.990e-27 Identity = 124/453 (27.37%), Postives = 211/453 (46.58%), Query Frame = 1 Query: 13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGN-FNYFALENAPAATI-GSSSRTVCYWV---------------RVLAGSNKIFHAQATHNDFEYRVQFVNNNSIQFRRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPN-PVPDPSTRF--FNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLG----TTTSDVAFVKVGEAVSTDDS-ILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 + RY L T++ G+S VS V+DATYG VAYF+G+ + + P + GS++R V +WV R G H + + + RV++ +N + T P W ++ YDG+ Y DG L T +T G +G + F G +G+M DFRIYD ALS ++ +L A GP+ + +T + F QL + +++ TV E GA ++ + S +GT +Y ++ G V L + T L + G + D+ ++T++++ +N DLS S ++ + +M+ F T D++ +++ TT S FVK G+++ + + IL PF G GQ + +SD+ST ++ +D+ N+++ I G+ VGD++V+DGK T+ L Sbjct: 7 IVRYPMTSVDTLGTNAEGSSYHAT-ATNVSIVSDATYGNVAYFSGDGTSRIDMNTIPTDVLSGSATRGVSFWVNFDEINGNYNVYTQGRASDGLGNFVHVKIGYQNTNVRVEYGVSNVHMWHT-----TTLLPDT--WYMFAMTYDGSVSRTYWDGNLVVEDTTVPDTTAGLVNLGKN--FLYGAD--FKGKMTDFRIYDFALSLENIQSLQADGPSLQIELGATVYPHFAQLTWADNDSNSSSTYDITVSENGGA---EVTVASSVTGTEFSAY-NLNDGSVYDFRLYSDGTV---LGRNLGQATPVIDSTSLTSMSSVLSN------------DLSVFTSDVVSEIQPLMDSSFETNDRIKVRVSVHNSTTVSTTTFVKSGDSIPLNSNYILTPFVPNGSSGQFFNLEMSDSSTKTLEFDESNSTILIDGAAYSVGDTLVLDGKTCTLGSL 428
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWE4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE4_9PHYC) HSP 1 Score: 119 bits (297), Expect = 3.370e-25 Identity = 76/203 (37.44%), Postives = 115/203 (56.65%), Query Frame = 1 Query: 706 EVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL--SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGV--FDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVSTD--DSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 EV GA+ Y++ SP G T ST + SL E+ YV ++ D S Y L + TTL N ++NY Y + G FDLS+ D ++A EVMN++F TGD + I +G+ T FVK+G +V D ++L+PF TGG Q ++ LSDNS+V++TYD+ ++ IGG G+S ++D +KLT+ ++ Sbjct: 447 EVPGATQYRLTKQLSPDGVETTVDTDFSTFEKRAESLQSESVYVFRVYSRTDPESEYTLAYQSSTTTLANVSSNYSAGDYKAEGEDQFDLSSFDKDTMANFHEVMNEVFDTGDAIVIPIGSETKKTKFVKLGGSVPIDGESAVLIPFLETGGSAQTASLTLSDNSSVTLTYDETAGTIGIGGVDYSPGESTIVDSQKLTLVEV 649
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: B5LWA1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWA1_9PHYC) HSP 1 Score: 112 bits (281), Expect = 1.070e-23 Identity = 124/452 (27.43%), Postives = 215/452 (47.57%), Query Frame = 1 Query: 13 VARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGN-FNYFALENAPAATI-GSSSRTVCYWVRV--LAGSNKIF---HAQATHNDF-EYRVQFVNNN-SIQF--RRNQVVHTEAYPTVGQWLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGGPNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTY--------VLQLSVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGSNGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVS-----TDDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 V RY + L T++ S +V VS V D T+GT AYF+G+ + + + P + GS+ R++ +WV ++ + ++ +A+ F + ++ + N +++ N+ T P W + YDG T Y G L T TV++NT G +G + S G + G+M+DFRIYD +S+ DV+++FA GP+P+ D + M Y Q + +VAG S+Y + E+ G ++++ + + + + L +TY VL SVD G L D+ + + +N D +V+ ++ V ++ L SL +EV+ + K T + FV+ GE S + SIL PF G GQ++++ LSD ST ++T+D++N ++ + G T GD V+D + + L Sbjct: 7 VVRYPMSSTDTLGTNAESLSFN-ASVENVSVVADETFGTAAYFSGDGTSRIDMSDIPTEVLAGSAPRSLSFWVNFDEISDNQNVYSQGNAETGEGLFAQVKIGYRGTNVRVEYGSHSNRFFETSLAPNT--WYSFVMTYDGVTSKTYWGGDLVLTQTVTLNTEAGFVNLGQTY---SNGID-FAGKMVDFRIYDVDMSSEDVSSVFADGPSPLLDVAA------VMLPYVAQLSWR------DVAGVSAYDVMYEEN-GGESVVAAESVDSTSLAVYDLKEGSTYNFKFYAGGVLVGSVD-GQTTPLLDSDNLKDMLTLVSN-DLTVFNTDTVSEMQRLMDLSLETNEEVVV-------RFTFKNKTLPLNARFVRDGETFSMSTLGVEGSILTPFIPDGSPGQSLSLELSDLSTTTLTFDEINGTVTVDGVTYSTGDKFVLDDRSCMLGSL 429
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNM5_ESV1K (EsV-1-39 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM5_ESV1K) HSP 1 Score: 106 bits (264), Expect = 5.490e-21 Identity = 60/134 (44.78%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 898 TLTNSAANYDKSVYGSN-GVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKL-GTTTSDVAFVKVGEAVSTDD--SILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTV 1287 TL N A+N+D S Y G FDL L + SL+ LD+V+ND+F+TGD + + L G + FVK G+ + DD SI +PF ++ G GQ++T+ L+D +TV+V YDD ++ IGG+T GDS+V+DG+K+T+ Sbjct: 477 TLPNVASNHDVSSYADERGGFDLRGLSTESLSALDDVLNDIFSTGDSVTLSLRGKGETKTKFVKRGDTAAIDDGVSIAMPFSASAGPGQSVTLALTDATTVAVAYDDTTEAVLIGGTTYAAGDSLVLDGQKVTI 610
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q6XM36_9PHYC (FirrV-1-A51 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM36_9PHYC) HSP 1 Score: 98.6 bits (244), Expect = 2.040e-18 Identity = 68/204 (33.33%), Postives = 113/204 (55.39%), Query Frame = 1 Query: 688 ISATVVEVAGASSYQINITESPSGTTLISYTGISTGDVIIGSLIPETTYVLQL-SVDKGSGYVLEDTKTVTTLTNSAANYDKSVYGS-NGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSDVAFVKVGEAVST--DDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTV 1287 I T V+GA +Y++ + + + TG + + L PET Y + L S G+ Y T + TTL N ++NY S + + +G +DLS SS + L ++ LF+TGD L + +G+ FVKVGE S ++++ +PF T Q+ + LSDNSTV++++D+ +N++ IGG G+S ++D +KLT+ Sbjct: 439 IDVTFAAVSGAIAYKLTKKTTTATDEIDVATGFTDLAQRVRDLQPETEYTISLYSSTDGTTYTPAGTASATTLANVSSNYSASDFSNESGKYDLSKFGKSSRSQLFQLAGTLFSTGDNLVVPVGSGNKTTKFVKVGENTSIVGEEALFIPFNETA---QSANITLSDNSTVTLSFDESDNTVEIGGEKYASGESTIVDQQKLTI 639
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K) HSP 1 Score: 81.3 bits (199), Expect = 1.220e-12 Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 802 IIGSLIPETTYVLQLSVDKGSG--YVLEDTKTVTTLTNSAANYDKSVYGS-NGVFDLSTLDSSSLALLDEVMNDLFATGDKLDIKLGTTTSD--VAFVKVGEAVST--DDSILVPFRSTGGVGQAITMNLSDNSTVSVTYDDVNNSLNIGGSTVQVGDSIVIDGKKLTVKDL 1296 I+ L ETTY ++L G G Y L TT N A NYD + + S +G +D+S LD S + MNDLF+TG +++ + + FVK G +S ++++L+PF S+ G Q+ T+ LSD IGG + G S+++DGKK+TV D+ Sbjct: 1040 IVSGLKAETTYTIRLYTAAGLGLEYTLLGQDDCTTYANLAKNYDVADFVSASGAYDISDLDDS----VSSAMNDLFSTGASVEVAINDSKKSRKTTFVKRGGVISVANEEALLLPFDSSSGATQSATITLSDXXXXXXXXXXXXXXXEIGGVSFTHGQSLILDGKKVTVVDI 1207
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: A0A1H1RF39_9FLAO (Por secretion system C-terminal sorting domain-containing protein n=2 Tax=unclassified Gillisia TaxID=2615025 RepID=A0A1H1RF39_9FLAO) HSP 1 Score: 75.9 bits (185), Expect = 7.040e-11 Identity = 75/304 (24.67%), Postives = 137/304 (45.07%), Query Frame = 1 Query: 10 LVARYKFNDAS-ALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENAPAATIGSSSRTVCYWVRVLAGSNKIFHAQATHNDFE-YRVQFVNNNSIQFRRNQVVHTEAYPTVGQ---------WLHISINYDGTTENIYLDGVLTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATL--FAGGPNPVPDPSTRF----FNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPS-GTTLISYTGISTGDVIIGSLIPETTYVLQLSVDKGSG 867 LVA YK N++S A+ D S +NT + VN G V + + +A+ A A ++S T+ W++ + + ++ HN + Y + ++ I FR NQ Y Q W+H+++ +DGTT N+Y++GVL ++ + S TA+G + + + G + G M D RIY+ AL+A +V+ + P+P P N ++++ T A+ GA +Y I ++ + S + ++ + +S + + L TTY ++ G Sbjct: 1001 LVAHYKMNESSGAMLADDSEIANTATIMGNPVRVNGVEGGAVRF--NGADQYAIAGANLALNLTNSLTIATWIKPEKRATQYVIKKSEHNAIDGYELSLSSSGKIFFRFNQATSNNTYRLNSQASYPIDGITWMHVAVTFDGTTMNLYINGVLDSSKSYSAATALGTNSMTLAIGSGNDGYRGILGAMDDVRIYNVALNAAEVSAIATITSSPSPPEIPLQELPLDLANNVEVDPTLTWNASD---------GALTYNIQVSNNNSFASFILDQSDLSATSIAVSDLTNSTTYYWRVRATNAEG 1293
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Match: A0A6M5UFC9_9MICO (Uncharacterized protein n=1 Tax=Cellulosimicrobium sp. BI34T TaxID=2587808 RepID=A0A6M5UFC9_9MICO) HSP 1 Score: 75.5 bits (184), Expect = 8.990e-11 Identity = 82/277 (29.60%), Postives = 119/277 (42.96%), Query Frame = 1 Query: 10 LVARYKFNDASAL-TTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFNYFALENAPAATIGSSSRTVCYWVRVLAGSNKIFHAQATHNDFE-YRVQFVNNNSIQFRRN--------QVVHTEAYPTVGQWLHISINYDGTTENIYLDGV--LTNTATVSINTAVGPFWIGNSPKFPSGGSETMEGEMLDFRIYDEALSATDVATLFAGG---PNPVPDPSTRFFNQLQMNKYSTQQATSISATVVEVAGASSYQINITESPSGTTLISYTGISTG 795 LV + ++ L TTDSSG T ++ G ST G+ G+ Y + ++ A + ++ TV W+R + + +AT + Y + + R N +V T +YPT G W+H+ YDGT IY+DGV + SI P IG P G M+G + R+YD ALSAT+VA LF GG PNP P Q ST T++S T+ + SP ++ TG +TG Sbjct: 644 LVGAWNLDEGQGLVTTDSSGWGGT-GSLVGASTWVPGVAGSAVRSDGSTGYVRVPDSAALDL-TTRLTVAAWIRPEQRATQYVVKKATQGATDGYELGLASGGKPFLRLNHGASGDTFRVEATSSYPTNGTWMHVVGTYDGTRMRIYVDGVEQASKAGPASIAANALPLGIGAEPN----GYRPMKGAVDGVRLYDRALSATEVAVLFQGGSTQPNPAP--------VAQDLAVSTSLGTAVSGTLAATVPQGTTPRFEVVSPPARGTVALTGTTTG 906 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5516.13801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5516.13801.1 >prot_L-elsbetiae_contig5516.13801.1 ID=prot_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp MSLVARYKFNDASALTTDSSGNSNTLVNVAGVSTVNDATYGTVAYFTGNFback to top mRNA from alignment at L-elsbetiae_contig5516:259..1986- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5516.13801.1 ID=mRNA_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1728bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:259..1986- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5516:259..1986- >mRNA_L-elsbetiae_contig5516.13801.1 ID=mRNA_L-elsbetiae_contig5516.13801.1|Name=mRNA_L-elsbetiae_contig5516.13801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig5516:259..1986- (Laminarionema elsbetiae ELsaHSoW15)back to top |