prot_L-elsbetiae_contig5507.13781.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5507.13781.1
Unique Nameprot_L-elsbetiae_contig5507.13781.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
BLAST of mRNA_L-elsbetiae_contig5507.13781.1 vs. uniprot
Match: D8LSK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK3_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 3.540e-96
Identity = 162/215 (75.35%), Postives = 179/215 (83.26%), Query Frame = 0
Query:    1 MQVTCVAVICALLVATTSVEGFGLSAQRSSFHAHRAM--ASPSARAPRATGRRSSGTAMFFDFGSKKEEKESNARPVAGGTVKGGKKTKIVQEVSPAQLRAQEKAAAIRERSRMAA-KKTEGVFTPPQFEAFKRARKEVPSGNGNAYWEKIAARVPGQDAAACKRVAESMLFEAAVGSKSNYFGGYVETIETQDYVDPEADIMFKINKFFGRGKK 212
            MQ TC+A++CA++   T VEGF     R S H HRA   AS S +A RA  RRSS T MFFDFG K E   SNARP+AGGTVKGGKKTKI Q+V+PAQ RAQEKA AIRERSR A+ +K+EGVFTPPQFEAFK+ARKEVPSG G+AYWEKIAARVPGQ+AAACKRVAESMLFEAAVG+KSNYFGGY+ETIET DYVDPEADIMFKINK FGRGKK
Sbjct:    1 MQATCIALLCAVVAMITCVEGFST---RPSLHTHRAATTASRSLQASRAGSRRSSQTRMFFDFGKKTE---SNARPMAGGTVKGGKKTKITQDVTPAQRRAQEKATAIRERSRKASTRKSEGVFTPPQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 209          
BLAST of mRNA_L-elsbetiae_contig5507.13781.1 vs. uniprot
Match: A0A835YZY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.220e-34
Identity = 77/161 (47.83%), Postives = 99/161 (61.49%), Query Frame = 0
Query:   55 TAMFFDFGSKKEEKESNARPVAGGTVKGGKKTKIVQEVS---PAQLRAQEKAAAIRERSRMAAKKTEGVFTPPQFEAFKRARKEVPSGNGNAYWEKIAARVPGQDAAACKRVAESMLFEAAVGSKSNYFGGYVETIETQDYVDPEADIMFKINKFFGRGKK 212
            T M F  G  K    +++RP AG T KG KKT +  + S   PA  R + KA AI  +         GVF+P Q+E F  AR  VPSG  N YW++IA +VPGQ+A  CK++A  +LFE A G+K N+FGGYVETIE +DYVD +AD+M K+   F  GKK
Sbjct:   44 TQMVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPAVER-RRKAQAIAAKKAAEKAAEAGVFSPEQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKLANMFSFGKK 202          
BLAST of mRNA_L-elsbetiae_contig5507.13781.1 vs. uniprot
Match: A0A835YSA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.940e-32
Identity = 72/150 (48.00%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   57 MFFDFGSKKEEKESNARPVAGGTVKGGKKTKIVQEVS---PAQLRAQEKAAAIRERSRMAAKKTEGVFTPPQFEAFKRARKEVPSGNGNAYWEKIAARVPGQDAAACKRVAESMLFEAAVGSKSNYFGGYVETIETQDYVDPEADIMFKI 203
            M F  G  K    +++RP AG T KG KKT +  + S   PA  R + KA AI  +         GVF+P Q+E F  AR  VPSG  N YW++IA +VPGQ+A  CK++A  +LFE A G+K N+FGGYVETIE +DYVD +AD+M K+
Sbjct:    1 MVFKLGPPKATSAASSRPTAGATTKGLKKTPVASDSSWNGPAVER-RRKAQAIAAKKAAEKAAEAGVFSPEQYEKFLDARATVPSGASN-YWQRIADKVPGQNAENCKKMASQLLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKL 148          
BLAST of mRNA_L-elsbetiae_contig5507.13781.1 vs. uniprot
Match: A0A7S2X777_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X777_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 8.750e-13
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 0
Query:  120 VFTPPQFEAFKRARKEVPSGNGNAYWEKIAARV-PGQDAAACKRVAESMLFEAAVGSKSNYFGGYV----ETIETQDYVDPEADIMFKINKFFGR--GKKEEAE 216
            VFT  Q   F +ARKE+PSG+G+AYW+K+A RV  G  A  CKR+A++ LF+ A G+ SN+F  +V    E +E+    +  AD M ++  F+G   G K+E E
Sbjct:   91 VFTDKQVARFLQARKELPSGSGDAYWQKVADRVGDGITAYECKRLAQNQLFKKAAGTSSNFFKNFVDVKGEYVESGYVDETAADPMTQMKNFWGGMLGMKKEVE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5507.13781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSK3_ECTSI3.540e-9675.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY5_9STRA1.220e-3447.83Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YSA5_9STRA6.940e-3248.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2X777_9EUKA8.750e-1343.27Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..216
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.767
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5507contigL-elsbetiae_contig5507:1338..3694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5507.13781.1mRNA_L-elsbetiae_contig5507.13781.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5507 414..3712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5507.13781.1 ID=prot_L-elsbetiae_contig5507.13781.1|Name=mRNA_L-elsbetiae_contig5507.13781.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MQVTCVAVICALLVATTSVEGFGLSAQRSSFHAHRAMASPSARAPRATGR
RSSGTAMFFDFGSKKEEKESNARPVAGGTVKGGKKTKIVQEVSPAQLRAQ
EKAAAIRERSRMAAKKTEGVFTPPQFEAFKRARKEVPSGNGNAYWEKIAA
RVPGQDAAACKRVAESMLFEAAVGSKSNYFGGYVETIETQDYVDPEADIM
FKINKFFGRGKKEEAE*
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