Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 385 |
Cds size | 366 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816563.4589744-CDS-L-elsbetiae_contig54:52922..53288 | 1622816563.4589744-CDS-L-elsbetiae_contig54:52922..53288 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig54 52923..53288 + |
1691683649.8800447-CDS-L-elsbetiae_contig54:52922..53288 | 1691683649.8800447-CDS-L-elsbetiae_contig54:52922..53288 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig54 52923..53288 + |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816563.4714816-UTR-L-elsbetiae_contig54:53288..53307 | 1622816563.4714816-UTR-L-elsbetiae_contig54:53288..53307 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig54 53289..53307 + |
1691683649.8911624-UTR-L-elsbetiae_contig54:53288..53307 | 1691683649.8911624-UTR-L-elsbetiae_contig54:53288..53307 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig54 53289..53307 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig54.13620.1 >prot_L-elsbetiae_contig54.13620.1 ID=prot_L-elsbetiae_contig54.13620.1|Name=mRNA_L-elsbetiae_contig54.13620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp
QRRRLPIDPKGARKPGPGGRWVGKALIEQPYRAERSNLRSRSIVPFVAVN VHSLQSLHKPTISRHGRSYPKGQGVKRRVARPTTCAPVATIPRGRKMPAS GLHMDQKSTLYRERRRARMYR* back to topmRNA from alignment at L-elsbetiae_contig54:52923..53307+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig54.13620.1 ID=mRNA_L-elsbetiae_contig54.13620.1|Name=mRNA_L-elsbetiae_contig54.13620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=385bp|location=Sequence derived from alignment at L-elsbetiae_contig54:52923..53307+ (Laminarionema elsbetiae ELsaHSoW15) CAGAGACGACGATTGCCCATCGATCCGAAAGGAGCACGAAAACCGGGGCC
GGGTGGTCGATGGGTGGGCAAGGCGCTAATTGAGCAACCATACCGAGCCG
AACGATCAAATCTACGGTCGCGTTCAATCGTACCTTTTGTCGCGGTAAAT
GTGCACTCCCTGCAATCTCTTCACAAGCCTACTATTTCGAGACACGGCAG
GAGCTACCCCAAGGGACAGGGGGTGAAGAGGAGAGTTGCAAGACCAACAA
CGTGTGCCCCGGTGGCGACAATCCCACGTGGAAGGAAAATGCCCGCTTCT
GGCCTGCACATGGACCAAAAAAGCACACTGTACCGCGAACGACGGCGCGC
TCGCATGTATAGGTAGATAGATACCTGCAGCAGCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig54:52923..53307+ >mRNA_L-elsbetiae_contig54.13620.1 ID=mRNA_L-elsbetiae_contig54.13620.1|Name=mRNA_L-elsbetiae_contig54.13620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig54:52923..53307+ (Laminarionema elsbetiae ELsaHSoW15) CAGAGACGACGATTGCCCATCGATCCGAAAGGAGCACGAAAACCGGGGCC GGGTGGTCGATGGGTGGGCAAGGCGCTAATTGAGCAACCATACCGAGCCG AACGATCAAATCTACGGTCGCGTTCAATCGTACCTTTTGTCGCGGTAAAT GTGCACTCCCTGCAATCTCTTCACAAGCCTACTATTTCGAGACACGGCAG GAGCTACCCCAAGGGACAGGGGGTGAAGAGGAGAGTTGCAAGACCAACAA CGTGTGCCCCGGTGGCGACAATCCCACGTGGAAGGAAAATGCCCGCTTCT GGCCTGCACATGGACCAAAAAAGCACACTGTACCGCGAACGACGGCGCGC TCGCATGTATAGGTAGCAGAGACGACGATTGCCCATCGATCCGAAAGGAG CACGAAAACCGGGGCCGGGTGGTCGATGGGTGGGCAAGGCGCTAATTGAG CAACCATACCGAGCCGAACGATCAAATCTACGGTCGCGTTCAATCGTACC TTTTGTCGCGGTAAATGTGCACTCCCTGCAATCTCTTCACAAGCCTACTA TTTCGAGACACGGCAGGAGCTACCCCAAGGGACAGGGGGTGAAGAGGAGA GTTGCAAGACCAACAACGTGTGCCCCGGTGGCGACAATCCCACGTGGAAG GAAAATGCCCGCTTCTGGCCTGCACATGGACCAAAAAAGCACACTGTACC GCGAACGACGGCGCGCTCGCATGTATAGGTAG back to top
|