prot_L-elsbetiae_contig5306.13464.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5306.13464.1
Unique Nameprot_L-elsbetiae_contig5306.13464.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: A0A812HR73_9DINO (Palmitoyltransferase (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812HR73_9DINO)

HSP 1 Score: 70.1 bits (170), Expect = 8.030e-11
Identity = 55/178 (30.90%), Postives = 80/178 (44.94%), Query Frame = 0
Query:    3 CECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVPWPGGARRLDLAWMLAAALLWLMRLAARRSTSLLKAVAVMATCLGGLGYSHLRALRQRSDSQFHVAWTTLSVLALYSRYREGVALTLSRTDDLMAHIILLALVSCYGHCCLV------DPGRDRGQIMADE 174
            CEC D D+     +  S    P   SA  P    +RV   A DR R+PW GGARRL+   + A  +L L+R   R ST     +  +A     L + H+  L     S + V+W   S+  LYS Y   V    S +  L+ H +LL +V+ +            D   ++GQ+ +DE
Sbjct:    6 CECTDFDKLVDDYL-NSLCRGPK--SAVPPRERLRRVFFTASDRCRIPWFGGARRLNAGALAAPVMLLLLRTVLRLSTYAPWLLFWLAVGASHLAWFHMACLSLPLRSDYFVSWVACSIAGLYSEYWSEVLPRQSSSSMLLCHGLLLVVVTSFASAVYTSAPVQEDQDAEKGQVQSDE 180          
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: A0A1Q9DAW9_SYMMI (Palmitoyltransferase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DAW9_SYMMI)

HSP 1 Score: 64.7 bits (156), Expect = 7.390e-9
Identity = 53/180 (29.44%), Postives = 79/180 (43.89%), Query Frame = 0
Query:    3 CECED----LDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVPWPGGARRLDLAWMLAAALLWLMRLAARRSTSLLKAVAVMATCLGGLGYSHLRALRQRSDSQFHVAWTTLSVLALYSRYREGVALTLSRTDDLMAHIILLALVSCYGHCCL----VDPGRDRGQIMADE 174
            CEC D    +D+    L     S+ P       P    +RV   A DR R+PW GGARRL+   + A  +L L+R   R ST     +  +A     L + H+  L     S + V+W   S+  LYS Y   V    S +  L+ H +LL +V  +         V    ++GQ+ ++E
Sbjct:   29 CECTDFDKLVDDYLNSLCRGPKSSVP-------PRERLRRVFFTASDRCRIPWFGGARRLNAGALAAPVMLLLLRTVLRLSTYAPWLLFWLAVGASHLAWFHVACLSLPLRSDYFVSWVACSIAGLYSEYWSEVLPRQSWSSVLLCHGLLLVVVISFASAVYTSAPVQEDAEQGQLQSEE 201          
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: D7G215_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G215_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.810e-7
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 FFCECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVPWPG 53
            FFCECEDLDE FT LV  SAS+A ++ +A+ P   WKRVL VAQDRARV + G
Sbjct:   20 FFCECEDLDETFTNLV--SASSAMSSTTASPP--GWKRVLDVAQDRARVGYGG 68          
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: A0A6H5LMG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMG4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.250e-6
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    2 FCECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRAR 48
            FCECEDLDE FT LV+ S++T+ T AS       WKRVL VAQDRAR
Sbjct:   21 FCECEDLDETFTNLVSASSATSSTTASPPG----WKRVLDVAQDRAR 63          
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: A0A023FC80_AMBCJ (Palmitoyltransferase (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=A0A023FC80_AMBCJ)

HSP 1 Score: 55.1 bits (131), Expect = 1.390e-5
Identity = 48/164 (29.27%), Postives = 72/164 (43.90%), Query Frame = 0
Query:    3 CECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVPWPGGARRLDLAWMLAAALLWLMRLAARRSTSLLKAVAVMATCLGGLGYSHLRALRQRSDSQFHVAWTTLSVLALYSRYREGVA----LTLSRTDDLMAHIILLALVSCYGHCCLVD 162
            C+CE LD AF  L       AP           W R+ A A DR RVPW GGA+R++L  +    LL  + L A  S ++L  +   +     L + H R    R+ ++F ++WT  S++ L   ++  V     +  S    LM  +    L +   H C  D
Sbjct:   34 CDCEALDTAFDRLFTCRRVPAPY----------WSRIKATAMDRIRVPWLGGAKRVELDLVSPIILLPTVLLLACHSWTML--MITFSVLPFALYFIHRRCSSSRTRTKFFLSWTVTSLVVLLGVFQLEVVPYLEILFSENTVLMLAVAFTCLCAYQVHSCPPD 185          
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Match: A0A6P7UE17_IXOSC (Palmitoyltransferase n=3 Tax=Ixodes TaxID=6944 RepID=A0A6P7UE17_IXOSC)

HSP 1 Score: 53.5 bits (127), Expect = 4.770e-5
Identity = 39/123 (31.71%), Postives = 62/123 (50.41%), Query Frame = 0
Query:    3 CECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVPWPGGARRLDLAWMLAAALL-WLMRLAARRSTSLLKAVAVMATCLGGLGYSHLRALRQRSDSQFHVAWTTLSVLAL 124
            C+CE +DE F  +V               P   W R+ +   DR RVPW GGARR++   + A  LL  ++ LA    T LL   +++  CL  +   H RA + ++ ++F ++WT  S++ L
Sbjct:   34 CDCEAIDEVFERIVTRRP----------VPPVYWSRISSTVMDRIRVPWFGGARRVEPDVLSAVVLLPTVLLLACHSWTVLLVTFSLLPVCLILI---HRRASKNKTRTRFFLSWTVTSLVLL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5306.13464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A812HR73_9DINO8.030e-1130.90Palmitoyltransferase (Fragment) n=2 Tax=Symbiodini... [more]
A0A1Q9DAW9_SYMMI7.390e-929.44Palmitoyltransferase n=4 Tax=Symbiodinium TaxID=29... [more]
D7G215_ECTSI1.810e-764.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LMG4_9PHAE2.250e-663.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A023FC80_AMBCJ1.390e-529.27Palmitoyltransferase (Fragment) n=2 Tax=Amblyomma ... [more]
A0A6P7UE17_IXOSC4.770e-531.71Palmitoyltransferase n=3 Tax=Ixodes TaxID=6944 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..101
NoneNo IPR availableTMHMMTMhelixcoord: 142..161
NoneNo IPR availableTMHMMTMhelixcoord: 82..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5306contigL-elsbetiae_contig5306:5703..8711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5306.13464.1mRNA_L-elsbetiae_contig5306.13464.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5306 5703..8711 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5306.13464.1 ID=prot_L-elsbetiae_contig5306.13464.1|Name=mRNA_L-elsbetiae_contig5306.13464.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
FFCECEDLDEAFTGLVAPSASTAPTAASAAAPTAAWKRVLAVAQDRARVP
WPGGARRLDLAWMLAAALLWLMRLAARRSTSLLKAVAVMATCLGGLGYSH
LRALRQRSDSQFHVAWTTLSVLALYSRYREGVALTLSRTDDLMAHIILLA
LVSCYGHCCLVDPGRDRGQIMADEIGPGAPPTGNQEDEGILGTG
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