mRNA_L-elsbetiae_contig5207.13302.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5207.13302.1
Unique NamemRNA_L-elsbetiae_contig5207.13302.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 4.760e-111
Identity = 175/219 (79.91%), Postives = 182/219 (83.11%), Query Frame = 1 
Query:  298 STQLFXXXXXXXXXXXXXXXXXMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            +TQLF                 M VRS AP+SS   LKM SAGS YV TLPGAPF DGKIFDPL LS+GA P DIKKWREAEIKHGRVAMLASLGVLVAE+YHP FMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLK+ Y PGDLGFDPL LKP+ EA L  M+TKELNNGRLAMIGIAGMLVQELINPADILG
Sbjct:    3 ATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKM-SAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 2.180e-104
Identity = 167/227 (73.57%), Postives = 180/227 (79.30%), Query Frame = 1 
Query:  274 SSKMTLGTSTQLFXXXXXXXXXXXXXXXXXMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            SS M LGT+  L                  M VRS AP+SS   LKM SAGS YV TLPGAPF DGKIFDPL LS+GA PG+IK WREAEIKHGRVAMLA++GV+VAE+YHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGL+D YSPGDLGFDPL LKPK +A L  MQTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    4 SSNMFLGTAATLIASSTAFVAP--------MAVRSAAPASSASALKM-SAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 7.820e-103
Identity = 160/196 (81.63%), Postives = 172/196 (87.76%), Query Frame = 1 
Query:  364 MTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 942
            + VRS AP+S+   LKM SAGS YV TLPGAPFSDGKIFDPL LS+GAAPGDIKKWREAEIKHGRVAMLASLG+LVAEEYHP FMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+N  DIL
Sbjct:   25 VAVRSAAPASAASALKM-SAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.460e-95
Identity = 141/161 (87.58%), Postives = 151/161 (93.79%), Query Frame = 1 
Query:  463 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            +IFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 4.720e-93
Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 1 
Query:  463 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            +IFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE+YHPFFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.030e-90
Identity = 151/227 (66.52%), Postives = 173/227 (76.21%), Query Frame = 1 
Query:  274 SSKMTLGTSTQLFXXXXXXXXXXXXXXXXXMTVRSVAPSSS---LKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            SS M LGT+  L                  M VRS AP+SS   LKM SAG+ Y+ TLPGA   +GKIFD L L++GA PG+IK WREAEIKHGRVAMLA++GV+VAE+YHPFFMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI  A+  PS VTGEGGL+D YSPGDLGFDP  +KPK +A L  MQ KELNNGRLAMIGI GMLVQEL+N  DILG
Sbjct:    4 SSNMFLGTAATLIASSAAFVTP--------MAVRSAAPASSASALKM-SAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 2.730e-85
Identity = 130/160 (81.25%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  463 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADIL 942
            KIFDPLGL++GA  GDIK WREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTI  A+  PS VTGEGGL+D YSPGDLGFDPL LKP  +  L TMQTKELNNGRLAMIGIAG LVQEL+NP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 4.440e-82
Identity = 141/196 (71.94%), Postives = 147/196 (75.00%), Query Frame = 1 
Query:  364 MTVRSVA--PSSSLKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            M VRSV   PSS     SAGS YV TLPGAPFSDGKIFDPLGLS+GAAPGDIKKWREAEIKHGRVAMLASLGV+VAE                            FW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLK+ Y PGDLGFDPL LKP  EA L  M+TKELNNGRLAMIGIAGML QEL+NPADILG
Sbjct:   25 MAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 9.730e-80
Identity = 123/193 (63.73%), Postives = 150/193 (77.72%), Query Frame = 1 
Query:  367 TVRSVAPSSSLKMQSAGSAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            T  S  P+S+    SAGS YV TLPGAPF+DGK++DP+GLS  A P DIKKWREAEIKHGRVAMLAS+GVLVAE +HP F+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   F     VTGEGG++  Y PGDLGFDPLGL P+ E +L  M+TKELN+GRLAMIGI GM+VQEL+ P  I G
Sbjct:   79 TTLSARPTSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Match: A0A6H5JAU1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU1_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 2.990e-65
Identity = 112/161 (69.57%), Postives = 121/161 (75.16%), Query Frame = 1 
Query:  463 KIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELINPADILG 945
            KI DPLGLS+GAAPGDIKKWRE EIKHGRVAMLASLGV+VAE                            FWVFSLLGMAFIEYNTI+TAF+TPSA+TGEGGLK+ Y PGDLGFDPL LKP   A L  M+TKELNNGRLAMIGIAGM+ QEL+NPADILG
Sbjct:   23 KILDPLGLSDGAAPGDIKKWRETEIKHGRVAMLASLGVIVAE----------------------------FWVFSLLGMAFIEYNTIITAFDTPSALTGEGGLKEDYMPGDLGFDPLNLKPDDVAALDVMKTKELNNGRLAMIGIAGMMAQELVNPADILG 155
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5207.13302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Q6_ECTSI4.760e-11179.91Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI2.180e-10473.57Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI7.820e-10381.63Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S5_ECTSI1.460e-9587.58Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE4.720e-9388.20LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7S0_ECTSI1.030e-9066.52Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI2.730e-8581.25Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE4.440e-8271.94LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G5B4_ECTSI9.730e-8063.73Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JAU1_9PHAE2.990e-6569.57LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5207contigL-elsbetiae_contig5207:2244..4899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.9e-91
Seed eggNOG ortholog2880.D7G7S3
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons4
Model size1446
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5207.13302.1prot_L-elsbetiae_contig5207.13302.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5207 2361..4401 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816534.254074-UTR-L-elsbetiae_contig5207:2243..23601622816534.254074-UTR-L-elsbetiae_contig5207:2243..2360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5207 2244..2360 +
1691683629.1991465-UTR-L-elsbetiae_contig5207:2243..23601691683629.1991465-UTR-L-elsbetiae_contig5207:2243..2360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5207 2244..2360 +
1622816534.325626-UTR-L-elsbetiae_contig5207:4401..48991622816534.325626-UTR-L-elsbetiae_contig5207:4401..4899Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5207 4402..4899 +
1691683629.2531548-UTR-L-elsbetiae_contig5207:4401..48991691683629.2531548-UTR-L-elsbetiae_contig5207:4401..4899Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5207 4402..4899 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816534.264364-CDS-L-elsbetiae_contig5207:2360..27081622816534.264364-CDS-L-elsbetiae_contig5207:2360..2708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 2361..2708 +
1691683629.2122216-CDS-L-elsbetiae_contig5207:2360..27081691683629.2122216-CDS-L-elsbetiae_contig5207:2360..2708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 2361..2708 +
1622816534.276782-CDS-L-elsbetiae_contig5207:3039..31621622816534.276782-CDS-L-elsbetiae_contig5207:3039..3162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 3040..3162 +
1691683629.2241514-CDS-L-elsbetiae_contig5207:3039..31621691683629.2241514-CDS-L-elsbetiae_contig5207:3039..3162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 3040..3162 +
1622816534.293095-CDS-L-elsbetiae_contig5207:3522..36061622816534.293095-CDS-L-elsbetiae_contig5207:3522..3606Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 3523..3606 +
1691683629.2353044-CDS-L-elsbetiae_contig5207:3522..36061691683629.2353044-CDS-L-elsbetiae_contig5207:3522..3606Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 3523..3606 +
1622816534.3086262-CDS-L-elsbetiae_contig5207:4125..44011622816534.3086262-CDS-L-elsbetiae_contig5207:4125..4401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 4126..4401 +
1691683629.243882-CDS-L-elsbetiae_contig5207:4125..44011691683629.243882-CDS-L-elsbetiae_contig5207:4125..4401Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5207 4126..4401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5207.13302.1

>prot_L-elsbetiae_contig5207.13302.1 ID=prot_L-elsbetiae_contig5207.13302.1|Name=mRNA_L-elsbetiae_contig5207.13302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
MLAYVNSLDSQSSVRCCRNHAAPLSHTPCHSHNHQQPTILFYISSLLSPH
PHSSKMTLGTSTQLFLGTAATLIASSTAFVAPMTVRSVAPSSSLKMQSAG
SAYVETLPGAPFSDGKIFDPLGLSEGAAPGDIKKWREAEIKHGRVAMLAS
LGVLVAEEYHPFFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYN
TIMTAFETPSAVTGEGGLKDSYSPGDLGFDPLGLKPKTEADLVTMQTKEL
NNGRLAMIGIAGMLVQELINPADILG*
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mRNA from alignment at L-elsbetiae_contig5207:2244..4899+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5207.13302.1 ID=mRNA_L-elsbetiae_contig5207.13302.1|Name=mRNA_L-elsbetiae_contig5207.13302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2656bp|location=Sequence derived from alignment at L-elsbetiae_contig5207:2244..4899+ (Laminarionema elsbetiae ELsaHSoW15)
GTGTCGGTCTCTGTAGGCAAAAATAGATCAGACGGTATTTCTCTGACCAA
CTCGCTGTATTTGGCTGGAGAAAGTCGAACCTCTCCGCAATTTGACGTGG
ACGGCCGTGTGACGTACATGCTGGCGTACGTCAACTCACTCGACAGTCAG
AGTTCTGTGCGTTGTTGTCGAAATCACGCCGCTCCTCTCTCGCACACCCC
CTGTCACTCTCACAACCACCAACAACCCACCATCCTCTTCTACATTTCCT
CTCTCCTCTCTCCCCACCCACATTCAAGCAAGATGACTCTCGGCACCTCC
ACCCAGTTGTTCCTCGGCACCGCCGCCACCCTAATCGCCTCGTCCACGGC
TTTCGTCGCCCCCATGACCGTGCGATCCGTGGCACCTTCGTCGAGCCTCA
AGATGCAGAGCGCTGGCTCCGCGTACGTCGAGACCCTGCCTGGCGCTCCC
TTCTCTGACGGAAAGGTGAGTACAGCAGTCATCTGAGTGCTGAGGTTGCG
CATATCGTCCGGCTTTTTCAACGAGAGCACTCCATATGTGTGGGTGCAAC
ACACCAACCGCGACGCACCACCTGCAAACGGTTCGCTGACTCCATAGCAG
ATGGGTGTAGCTCAGCTCTCTCTACGTTAGACTATAGATGTTCGAATGCG
AACACAGCTACGGCATCTGCCACGTCGTAAGTAAGCTGCTACAAATGTAC
CCTCCTCACCCCTCAACCCCAGTTCTAACTTGTTGTGTACACTGCTGCTA
CCCTACCGCTGCACACTCACGCCGTCCCACCTGCTTCCCACCGCAGATCT
TCGACCCGCTCGGCCTGTCGGAGGGCGCTGCCCCCGGCGACATCAAGAAG
TGGCGCGAGGCCGAGATCAAGCACGGACGCGTAGCCATGCTCGCATCGCT
CGGTGTTCTAGTCGCAGAGGTATGCACATACTTCGAAGTATATGTAAGAG
ATGCTGGCTTCTGTCGTAGCTCGGTACCTGAGAGCGTTCCTTCCTTCGGG
CATGCCTCTTCCACCCATCCTTGTAGACCACGTTTTAGACCATGTTTGTG
TGTGTGGAGCTGATGAATGTTTGAAGCGATGTCGAGCCGAAACCGTCATG
CCCTGTTGGAGATCCAGGCGACGCAAACCGCGCTTGGTCCCCGATGGTGC
TGATTTGCTGCCCTCTACGCCATCGCCTCTGTGACGTGAAGCTCCCATGA
ATTGTTGTCTTCTCCCTCTCTGATCTTGATCTGACACGAGTTACTGCTGT
TGGTGCTGTATTTGGTGTTCTCTCTGCAGGAGTACCACCCGTTCTTCATG
GGCCCTGACTACATCGGCCCCGCCGTGGACCACTTCCAGGAGATCTCCGC
CCAGTATCCCGAGGTGAGGATTGTCTTGTTTTGCTGGATCTCAACAGGTA
CACGCACACGTATTACCAGTAGATAGCATTCAAGTTGGATTCCCTCCGGA
ACTCGATCGGCCAACAAGACTCGAGACTGATATCTCTGCACGCACCCAGT
CTTGTTGTCTGTAGTATCTAGATGACATGGAATAGGCATGTTCGGCCGTA
CGGCGGCAAGCACTCGCAAGCCGAAACTGTTGTCTGGAAAACGCTTGGCT
CAGTGGGAGGCGCACGCGTGCTTCTACACGCCGCCCGTGCGCACGAAGGA
TGCAACAGGATTGCGACGCTTGTGACTCGATTGATTTTTGACTCACAGCA
CTACGTTCAACCAACTAGATTGGTTGGAGTGCTTTAATGATTGGTACTTT
TCGTCATACTGTTGTAATGTAAGCGATGCTGTTGTATCCGCCATTGTCTG
TTGTACCCCTGCGTCTCATCGTGTGTCATCCTCAACTCATATTTGTATGT
CCACGCACTTCCTTGCTTCCATATACTTGCAGTTCTGGGTGTTCTCCCTC
CTGGGCATGGCCTTCATCGAGTACAACACCATCATGACCGCGTTCGAGAC
GCCTAGCGCCGTGACCGGCGAGGGCGGCCTCAAGGACAGCTACAGCCCGG
GAGACCTCGGCTTCGACCCACTCGGCCTCAAGCCCAAGACCGAGGCGGAC
CTCGTGACGATGCAGACCAAGGAGCTCAACAACGGCCGCCTGGCCATGAT
CGGCATCGCCGGCATGTTGGTGCAGGAGCTCATCAACCCGGCGGACATCC
TCGGCTGATCATGACTACTTGAATACCCAATAGATTGAAACGCCTCGGCA
GTAGTCATTTCGAGCACCCGATCAGCAGTGGGGGGATGGGTGGTTTTGGC
TATCGCGAAGTGAGGACACCCGTGAACCGCGATGATCGAAGAGGAAATAT
CGACTCTACTACTGTAGCGTGGGCTCTCATCTGGAGTGGAAGGTGTAGGG
TGGCTCACGCATTGCGTGCGTGTATTTTTACGTTGTTGATAGTGTACATT
GATTTGTGGGATACATATGTACGTGTTTGTTTGTGTAAACTACTGAAGTA
TTATTTTTCATTGGGCAGTCTTCGTATTTACCGCCTCCGGTCCTTTGCGG
TCTTGGTGAAGCGGTCGATTTACTGGCATGGACAGAAGTCGCCGTTCGCG
TTGCCTGACAAATAGGAAGATGTGTGGTTTGATGCCTTCGTCGTACGCAC
CACGAAGCTAATTGGTTTGCTCTGAAGTTGGCTCGGCAAAAAGTGTGTCA
TCGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5207:2244..4899+

>mRNA_L-elsbetiae_contig5207.13302.1 ID=mRNA_L-elsbetiae_contig5207.13302.1|Name=mRNA_L-elsbetiae_contig5207.13302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig5207:2244..4899+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGCGTACGTCAACTCACTCGACAGTCAGAGTTCTGTGCGTTGTTG
TCGAAATCACGCCGCTCCTCTCTCGCACACCCCCTGTCACTCTCACAACC
ACCAACAACCCACCATCCTCTTCTACATTTCCTCTCTCCTCTCTCCCCAC
CCACATTCAAGCAAGATGACTCTCGGCACCTCCACCCAGTTGTTCCTCGG
CACCGCCGCCACCCTAATCGCCTCGTCCACGGCTTTCGTCGCCCCCATGA
CCGTGCGATCCGTGGCACCTTCGTCGAGCCTCAAGATGCAGAGCGCTGGC
TCCGCGTACGTCGAGACCCTGCCTGGCGCTCCCTTCTCTGACGGAAAGAT
GCTGGCGTACGTCAACTCACTCGACAGTCAGAGTTCTGTGCGTTGTTGTC
GAAATCACGCCGCTCCTCTCTCGCACACCCCCTGTCACTCTCACAACCAC
CAACAACCCACCATCCTCTTCTACATTTCCTCTCTCCTCTCTCCCCACCC
ACATTCAAGCAAGATGACTCTCGGCACCTCCACCCAGTTGTTCCTCGGCA
CCGCCGCCACCCTAATCGCCTCGTCCACGGCTTTCGTCGCCCCCATGACC
GTGCGATCCGTGGCACCTTCGTCGAGCCTCAAGATGCAGAGCGCTGGCTC
CGCGTACGTCGAGACCCTGCCTGGCGCTCCCTTCTCTGACGGAAAGATCT
TCGACCCGCTCGGCCTGTCGGAGGGCGCTGCCCCCGGCGACATCAAGAAG
TGGCGCGAGGCCGAGATCAAGCACGGACGCGTAGCCATGCTCGCATCGCT
CGGTGTTCTAGTCGCAGAGATCTTCGACCCGCTCGGCCTGTCGGAGGGCG
CTGCCCCCGGCGACATCAAGAAGTGGCGCGAGGCCGAGATCAAGCACGGA
CGCGTAGCCATGCTCGCATCGCTCGGTGTTCTAGTCGCAGAGGAGTACCA
CCCGTTCTTCATGGGCCCTGACTACATCGGCCCCGCCGTGGACCACTTCC
AGGAGATCTCCGCCCAGTATCCCGAGGAGTACCACCCGTTCTTCATGGGC
CCTGACTACATCGGCCCCGCCGTGGACCACTTCCAGGAGATCTCCGCCCA
GTATCCCGAGTTCTGGGTGTTCTCCCTCCTGGGCATGGCCTTCATCGAGT
ACAACACCATCATGACCGCGTTCGAGACGCCTAGCGCCGTGACCGGCGAG
GGCGGCCTCAAGGACAGCTACAGCCCGGGAGACCTCGGCTTCGACCCACT
CGGCCTCAAGCCCAAGACCGAGGCGGACCTCGTGACGATGCAGACCAAGG
AGCTCAACAACGGCCGCCTGGCCATGATCGGCATCGCCGGCATGTTGGTG
CAGGAGCTCATCAACCCGGCGGACATCCTCGGCTGATTCTGGGTGTTCTC
CCTCCTGGGCATGGCCTTCATCGAGTACAACACCATCATGACCGCGTTCG
AGACGCCTAGCGCCGTGACCGGCGAGGGCGGCCTCAAGGACAGCTACAGC
CCGGGAGACCTCGGCTTCGACCCACTCGGCCTCAAGCCCAAGACCGAGGC
GGACCTCGTGACGATGCAGACCAAGGAGCTCAACAACGGCCGCCTGGCCA
TGATCGGCATCGCCGGCATGTTGGTGCAGGAGCTCATCAACCCGGCGGAC
ATCCTCGGCTGA
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