prot_L-elsbetiae_contig518.13264.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig518.13264.1
Unique Nameprot_L-elsbetiae_contig518.13264.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.080e-31
Identity = 100/109 (91.74%), Postives = 103/109 (94.50%), Query Frame = 0
Query:   21 MLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF-----GGGD 124
            MLLVLGGNASPTKEDVT AL+AVG++CDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF     GGGD
Sbjct:    1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXXEGGGD 109          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 7.190e-26
Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFGGGDEG 126
            MRHLA YM+LVLGGNASP+ EDVT ALS+VG++ DEARL QLIA+M GKD+  ++EAGK KLAS GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFGGG+ G
Sbjct:    1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGG 114          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A448ZRL0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRL0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 9.280e-21
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFG 79
            M+ LATY++L +GGNASP+KEDVT ALSAVGV+ D A LD+L AD+ GK+IA LIEAGK +LA FG
Sbjct:    1 MKELATYLMLQIGGNASPSKEDVTGALSAVGVEADSASLDKLFADIEGKEIAELIEAGKDQLAKFG 66          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: B7GA61_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA61_PHATC)

HSP 1 Score: 89.4 bits (220), Expect = 1.390e-20
Identity = 79/108 (73.15%), Postives = 95/108 (87.96%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 121
            M+HLA Y+LL LGGNASPTK+D+T ALSAVGV+ D A LD+++AD+ G+D+ AL+E+G   LA+FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +D+GGGMDMFG
Sbjct:    1 MKHLAAYLLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MDLGGGMDMFG 106          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.300e-19
Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 122
            M+H+A Y+LLVLGGNASP+ +DV  AL  VGV+ ++ RL+ LI+++ GKD++ LI  G GKLA  G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGG
Sbjct:    1 MKHMAAYLLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDMGGGMDMFGG 109          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A6U3YSQ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YSQ4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.540e-19
Identity = 79/114 (69.30%), Postives = 96/114 (84.21%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG-GDEG 126
            M+H+ATY+LL LGGN +PT +D+T ALS VGV+ D   + QL+++M GKD+  ++EAG  +LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGG GD+G
Sbjct:    1 MKHIATYLLLRLGGNDAPTADDITKALSTVGVEADADAVSQLLSEMEGKDLNEVLEAGNARLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADIGGGMDMFGGDGDDG 114          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A1E7EY82_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY82_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.240e-18
Identity = 40/66 (60.61%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFG 79
            M+ LATY++L +GGNA+P+K+++TA+LSAVGV+ D A LD+L  D+ GKDIA L+EAGK +LA FG
Sbjct:    1 MKELATYLMLQIGGNATPSKDEITASLSAVGVEVDTASLDKLYTDLEGKDIAELMEAGKAQLAKFG 66          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A4D9D2N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2N6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.350e-18
Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI----DMGGGMDMFGGGD 124
            MRHLATY+LL LGGN +P+  DVT ALS+VGV+ DE RL  L+ D+ GKD+  LIE G   LA+FG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     D+GG MDMFGGGD
Sbjct:    1 MRHLATYLLLKLGGNENPSASDVTTALSSVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGAMDMFGGGD 115          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S1BJ38_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ38_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.760e-18
Identity = 81/113 (71.68%), Postives = 91/113 (80.53%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 126
            M+HLA Y+L VLGGN SP+  DVT ALSAVGV+ D  RL  L+ D+ GKD+  L+ +GKG LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DMGGGMDMFGG + G
Sbjct:    1 MKHLAAYLLCVLGGNESPSVSDVTTALSAVGVEADSERLATLVKDLEGKDLNELLTSGKGLLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ADMGGGMDMFGGDEAG 112          
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.850e-18
Identity = 77/113 (68.14%), Postives = 96/113 (84.96%), Query Frame = 0
Query:   14 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 126
            M+H+A Y+LLVLGGNASP+ +DVT +L++VGV+ D+  LD+LI+++ GKD+  ++E+GK  LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DMGGGMDMFGG + G
Sbjct:    1 MKHVAAYLLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ADMGGGMDMFGGDEAG 111          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7B6_ECTSI2.080e-3191.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFT3_9STRA7.190e-2679.8260s acidic ribosomal protein-domain-containing pro... [more]
A0A448ZRL0_9STRA9.280e-2168.18Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7GA61_PHATC1.390e-2073.15Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0C3X8_9STRA2.300e-1970.64Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6U3YSQ4_9STRA6.540e-1969.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7EY82_9STRA1.240e-1860.61Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A4D9D2N6_9STRA1.350e-1870.43Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1BJ38_9STRA1.760e-1871.68Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2RFX2_9STRA1.850e-1868.14Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 30..117
e-value: 2.6E-18
score: 66.4
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 14..120
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 14..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..126
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..29
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 13..73
e-value: 1.2E-20
score: 75.3
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 15..121
score: 13.417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig518contigL-elsbetiae_contig518:23509..26923 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig518.13264.1mRNA_L-elsbetiae_contig518.13264.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig518 23509..26923 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig518.13264.1 ID=prot_L-elsbetiae_contig518.13264.1|Name=mRNA_L-elsbetiae_contig518.13264.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
RSSCFRLSLNRFKMRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEA
RLDQLIADMAGKDIAALIEAGKGKLASFGGGGGGGGGGGGGGDAAPAAEE
KKVEEEEEEEIDMGGGMDMFGGGDEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12