mRNA_L-elsbetiae_contig518.13264.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI) HSP 1 Score: 116 bits (291), Expect = 2.080e-31 Identity = 100/109 (91.74%), Postives = 103/109 (94.50%), Query Frame = 1 Query: 61 MLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF-----GGGD 372 MLLVLGGNASPTKEDVT AL+AVG++CDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF GGGD Sbjct: 1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXXEGGGD 109
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA) HSP 1 Score: 102 bits (255), Expect = 7.190e-26 Identity = 91/114 (79.82%), Postives = 102/114 (89.47%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFGGGDEG 378 MRHLA YM+LVLGGNASP+ EDVT ALS+VG++ DEARL QLIA+M GKD+ ++EAGK KLAS GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFGGG+ G Sbjct: 1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGG 114
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A448ZRL0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRL0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 9.280e-21 Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFG 237 M+ LATY++L +GGNASP+KEDVT ALSAVGV+ D A LD+L AD+ GK+IA LIEAGK +LA FG Sbjct: 1 MKELATYLMLQIGGNASPSKEDVTGALSAVGVEADSASLDKLFADIEGKEIAELIEAGKDQLAKFG 66
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: B7GA61_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA61_PHATC) HSP 1 Score: 89.4 bits (220), Expect = 1.390e-20 Identity = 79/108 (73.15%), Postives = 95/108 (87.96%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 363 M+HLA Y+LL LGGNASPTK+D+T ALSAVGV+ D A LD+++AD+ G+D+ AL+E+G LA+FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFG Sbjct: 1 MKHLAAYLLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MDLGGGMDMFG 106
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.300e-19 Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 366 M+H+A Y+LLVLGGNASP+ +DV AL VGV+ ++ RL+ LI+++ GKD++ LI G GKLA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGG Sbjct: 1 MKHMAAYLLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDMGGGMDMFGG 109
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A6U3YSQ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3YSQ4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 6.540e-19 Identity = 79/114 (69.30%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG-GDEG 378 M+H+ATY+LL LGGN +PT +D+T ALS VGV+ D + QL+++M GKD+ ++EAG +LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGG GD+G Sbjct: 1 MKHIATYLLLRLGGNDAPTADDITKALSTVGVEADADAVSQLLSEMEGKDLNEVLEAGNARLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADIGGGMDMFGGDGDDG 114
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A1E7EY82_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EY82_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.240e-18 Identity = 40/66 (60.61%), Postives = 55/66 (83.33%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFG 237 M+ LATY++L +GGNA+P+K+++TA+LSAVGV+ D A LD+L D+ GKDIA L+EAGK +LA FG Sbjct: 1 MKELATYLMLQIGGNATPSKDEITASLSAVGVEVDTASLDKLYTDLEGKDIAELMEAGKAQLAKFG 66
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A4D9D2N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2N6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.350e-18 Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI----DMGGGMDMFGGGD 372 MRHLATY+LL LGGN +P+ DVT ALS+VGV+ DE RL L+ D+ GKD+ LIE G LA+FG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GG MDMFGGGD Sbjct: 1 MRHLATYLLLKLGGNENPSASDVTTALSSVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGAMDMFGGGD 115
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S1BJ38_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ38_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.760e-18 Identity = 81/113 (71.68%), Postives = 91/113 (80.53%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 378 M+HLA Y+L VLGGN SP+ DVT ALSAVGV+ D RL L+ D+ GKD+ L+ +GKG LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFGG + G Sbjct: 1 MKHLAAYLLCVLGGNESPSVSDVTTALSAVGVEADSERLATLVKDLEGKDLNELLTSGKGLLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ADMGGGMDMFGGDEAG 112
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.850e-18 Identity = 77/113 (68.14%), Postives = 96/113 (84.96%), Query Frame = 1 Query: 40 MRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGDEG 378 M+H+A Y+LLVLGGNASP+ +DVT +L++VGV+ D+ LD+LI+++ GKD+ ++E+GK LA FGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFGG + G Sbjct: 1 MKHVAAYLLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ADMGGGMDMFGGDEAG 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig518.13264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig518.13264.1 >prot_L-elsbetiae_contig518.13264.1 ID=prot_L-elsbetiae_contig518.13264.1|Name=mRNA_L-elsbetiae_contig518.13264.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp RSSCFRLSLNRFKMRHLATYMLLVLGGNASPTKEDVTAALSAVGVDCDEAback to top mRNA from alignment at L-elsbetiae_contig518:23509..26923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig518.13264.1 ID=mRNA_L-elsbetiae_contig518.13264.1|Name=mRNA_L-elsbetiae_contig518.13264.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3415bp|location=Sequence derived from alignment at L-elsbetiae_contig518:23509..26923- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig518:23509..26923- >mRNA_L-elsbetiae_contig518.13264.1 ID=mRNA_L-elsbetiae_contig518.13264.1|Name=mRNA_L-elsbetiae_contig518.13264.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig518:23509..26923- (Laminarionema elsbetiae ELsaHSoW15)back to top |