prot_L-elsbetiae_contig5121.13189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5121.13189.1
Unique Nameprot_L-elsbetiae_contig5121.13189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length76
Homology
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BLAST of mRNA_L-elsbetiae_contig5121.13189.1 vs. uniprot
Match: A0A6H5KTU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU2_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-14
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    8 RREGGVCAACLAEGVPRAFLLSNKHARKGPRICSTIRGKWRRQGGLTSSASAD 60
            RRE GVCAACLA GV R FLLSNKH RKGP+IC  I+ K+R +GG TS+ S D
Sbjct:  199 RREAGVCAACLAAGVRRDFLLSNKHERKGPKICLAIQEKFREEGGHTSTTSDD 251
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BLAST of mRNA_L-elsbetiae_contig5121.13189.1 vs. uniprot
Match: A0A6H5KTA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA8_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.830e-14
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    8 RREGGVCAACLAEGVPRAFLLSNKHARKGPRICSTIRGKWRRQGGLTSSASAD 60
            RRE GVCAACLA GV R FLLSNKH RKGP+IC  I+ K+R +GG TS+ S D
Sbjct:  202 RREAGVCAACLAAGVRRDFLLSNKHERKGPKICLAIQKKFREEGGHTSTTSDD 254
[Close]
BLAST of mRNA_L-elsbetiae_contig5121.13189.1 vs. uniprot
Match: A0A6H5JT80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT80_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 8.870e-13
Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:    8 RREGGVCAACLAEGVPRAFLLSNKHARKGPRICSTIRGKWRRQGGLTSSASAD 60
            RRE GVCAACLA GV R  LLSNKHARKGP+IC  I+ K R +GG TS+   D
Sbjct:  232 RREAGVCAACLAAGVRRDSLLSNKHARKGPKICLAIQKKIREEGGHTSTTGDD 284
[Close]
BLAST of mRNA_L-elsbetiae_contig5121.13189.1 vs. uniprot
Match: A0A6H5KFZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ2_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 7.130e-10
Identity = 27/36 (75.00%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    8 RREGGVCAACLAEGVPRAFLLSNKHARKGPRICSTI 43
            RRE GVCAACL+ GV R FLLSNKH RKGP+IC  I
Sbjct:   98 RREVGVCAACLSAGVRRDFLLSNKHERKGPKICLAI 133
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5121.13189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KTU2_9PHAE1.770e-1467.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTA8_9PHAE1.830e-1467.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT80_9PHAE8.870e-1366.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFZ2_9PHAE7.130e-1075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5121contigL-elsbetiae_contig5121:1793..2020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5121.13189.1mRNA_L-elsbetiae_contig5121.13189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5121 1710..2251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5121.13189.1 ID=prot_L-elsbetiae_contig5121.13189.1|Name=mRNA_L-elsbetiae_contig5121.13189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp
MGEVQEDRREGGVCAACLAEGVPRAFLLSNKHARKGPRICSTIRGKWRRQ
GGLTSSASADNLSEDNGDSASDVGA*
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