Homology
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
D8LER3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER3_ECTSI)
HSP 1 Score: 175 bits (443), Expect = 1.220e-54
Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVSQQPTASGE 285
LFQASL PYLAFLWLLSRKET+TPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHG+AESFLT+TNLFIVSAFRKAVV +QP A GE
Sbjct: 42 LFQASLFPYLAFLWLLSRKETKTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGIAESFLTLTNLFIVSAFRKAVVGKQPAAGGE 136
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A6H5KGT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT7_9PHAE)
HSP 1 Score: 172 bits (437), Expect = 7.150e-50
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVSQQPTA 276
LFQASLLPYLAFLWLLSRKET+TPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHG+AESFLT+TNLFIVSAFRKAVV +QP A
Sbjct: 150 LFQASLLPYLAFLWLLSRKETKTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGIAESFLTLTNLFIVSAFRKAVVGKQPAA 241
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A835YND2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND2_9STRA)
HSP 1 Score: 138 bits (348), Expect = 1.670e-39
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVV 258
LFQASL PYLAFL+ LS+ ET+TP+GGTF F FLLVFV ATIPAGI AK +YNEILANVDYLHGVAESFLTITNL IV AFR AV+
Sbjct: 91 LFQASLAPYLAFLYFLSKPETKTPKGGTFSFTFLLVFVAATIPAGILAKVQYNEILANVDYLHGVAESFLTITNLLIVKAFRDAVI 176
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A0G4G427_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G427_VITBC)
HSP 1 Score: 119 bits (298), Expect = 5.440e-30
Identity = 62/88 (70.45%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVSQ 264
LF ASL PYLAFLW LSR ETR P FGF FLLVFV TIPAGI AK YNE LANVDYLHG AESFLT+TNL IV R+A+V +
Sbjct: 24 LFAASLFPYLAFLWFLSRPETRMPRLANFGFQFLLVFVGMTIPAGILAKVWYNEKLANVDYLHGGAESFLTVTNLLIVIGMRQAIVDE 111
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A2V3IH42_9FLOR (Ycf49-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH42_9FLOR)
HSP 1 Score: 116 bits (290), Expect = 2.520e-29
Identity = 59/83 (71.08%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 4 FQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKA 252
F ASL PYLAFL+LL+RK+ P FGF FLLVFV ATIPAGIYAKT Y++ILANVD+LHG AES LTITNL IV FR+A
Sbjct: 21 FAASLFPYLAFLYLLNRKQVNCPPLANFGFRFLLVFVFATIPAGIYAKTHYHDILANVDWLHGSAESLLTITNLLIVLGFRQA 103
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A7S4FPV4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FPV4_9EUGL)
HSP 1 Score: 117 bits (292), Expect = 8.430e-29
Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAV 255
LFQASL+PYLAFL+ L R T+ P G GFAFLLVFV ATIPAGIYAKT+Y +ILANVD+LHG AES LTITNL+IV R A+
Sbjct: 136 LFQASLVPYLAFLFFLGRPSTKLPAGAWRGFAFLLVFVFATIPAGIYAKTQYGDILANVDWLHGGAESLLTITNLWIVFGLRSAM 220
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A1X6NWM6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWM6_PORUM)
HSP 1 Score: 112 bits (281), Expect = 2.690e-28
Identity = 59/87 (67.82%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVS 261
LF ASL PYLAFL+ LSR ET P+G GFAFLLVFV ATIPAGIYAK +ILANVD+LHG AES LT+TNL IV FR + S
Sbjct: 131 LFAASLFPYLAFLYFLSRPETGCPKGAYRGFAFLLVFVFATIPAGIYAKVVVGDILANVDWLHGSAESLLTVTNLLIVGGFRAGLAS 217
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
UPI001A0F1549 (DUF3593 domain-containing protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI001A0F1549)
HSP 1 Score: 106 bits (265), Expect = 5.060e-28
Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAV 255
LF SL PYL FLW +++ + +TP+G GF LLVFV TIPAGIYAKT YN LANVD+LHG AESFLT+TN+F+V F++A+
Sbjct: 6 LFALSLFPYLGFLWFMTKSQ-QTPKGALIGFYLLLVFVGVTIPAGIYAKTVYNAELANVDWLHGSAESFLTLTNIFVVIGFQQAI 89
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A7S0W6D8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W6D8_9CRYP)
HSP 1 Score: 108 bits (271), Expect = 6.150e-28
Identity = 55/89 (61.80%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVSQQ 267
LF SL PYL FL+ L ++ET TP G FGF FLLVFV A+IPA I AK Y +ILANVD+LHG +E FLT+TN+FIV FR+AV S++
Sbjct: 34 LFAFSLFPYLGFLYHLDKEETNTPSLGNFGFRFLLVFVFASIPAAIAAKALYGDILANVDWLHGSSEFFLTLTNIFIVLGFRRAVASRE 122
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Match:
A0A0G4G622_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G622_9ALVE)
HSP 1 Score: 114 bits (286), Expect = 7.870e-28
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 1
Query: 1 LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVDYLHGVAESFLTITNLFIVSAFRKAV 255
LF +SL PYLAFLW L R ET+TP FGF FLLVFV +TIPAGIYAKT+Y E LANVD+LHG +E+FL ITNL IV R+A+
Sbjct: 86 LFSSSLAPYLAFLWFLGRPETKTPPLALFGFRFLLVFVFSTIPAGIYAKTQYGEKLANVDWLHGGSEAFLCITNLIIVLGMRRAL 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5115.13175.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.22e-54 / Id = 91.58 Expect = 7.15e-50 / Id = 93.48 Expect = 1.67e-39 / Id = 80.23 Expect = 5.44e-30 / Id = 70.45 Expect = 2.52e-29 / Id = 71.08 Expect = 8.43e-29 / Id = 70.59 Expect = 2.69e-28 / Id = 67.82 Expect = 5.06e-28 / Id = 61.18 Expect = 6.15e-28 / Id = 61.80 Expect = 7.87e-28 / Id = 67.06 Sequence D8LER3_ECTSI A0A6H5KGT7_9PHAE A0A835YND2_9STRA A0A0G4G427_VITBC A0A2V3IH42_9FLOR A0A7S4FPV4_9EUGL A0A1X6NWM6_PORUM UPI001A0F1549 A0A7S0W6D8_9CRYP A0A0G4G622_9ALVE
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 176.8
Seed ortholog evalue 5.1e-42
Seed eggNOG ortholog 2880.D8LER3
Hectar predicted targeting category signal anchor
GOs GO:0003674,GO:0003824,GO:0004103,GO:0004305,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0097164,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc. positive regulation of TORC1 signaling
EggNOG OGs KOG2445@1,KOG2445@2759
COG Functional cat. U
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
Ec32 ortholog description Protein of unknown function DUF3593
Ec32 ortholog Ec-26_000850.1
Exons 2
Model size 300
Cds size 300
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816521.9418488-CDS-L-elsbetiae_contig5115:3104..3262 1622816521.9418488-CDS-L-elsbetiae_contig5115:3104..3262 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5115 3105..3262 -
1691683620.374554-CDS-L-elsbetiae_contig5115:3104..3262 1691683620.374554-CDS-L-elsbetiae_contig5115:3104..3262 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5115 3105..3262 -
1622816521.9531186-CDS-L-elsbetiae_contig5115:3764..3906 1622816521.9531186-CDS-L-elsbetiae_contig5115:3764..3906 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5115 3765..3906 -
1691683620.3861794-CDS-L-elsbetiae_contig5115:3764..3906 1691683620.3861794-CDS-L-elsbetiae_contig5115:3764..3906 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig5115 3765..3906 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5115.13175.1
>prot_L-elsbetiae_contig5115.13175.1 ID=prot_L-elsbetiae_contig5115.13175.1|Name=mRNA_L-elsbetiae_contig5115.13175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
LFQASLLPYLAFLWLLSRKETRTPEGGTFGFAFLLVFVVATIPAGIYAKT EYNEILANVDYLHGVAESFLTITNLFIVSAFRKAVVSQQPTASGEGATQS back to top mRNA from alignment at L-elsbetiae_contig5115:3105..3906-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5115.13175.1 ID=mRNA_L-elsbetiae_contig5115.13175.1|Name=mRNA_L-elsbetiae_contig5115.13175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=802bp|location=Sequence derived from alignment at L-elsbetiae_contig5115:3105..3906- (Laminarionema elsbetiae ELsaHSoW15)CTGTTCCAGGCCTCGCTGCTGCCGTACCTCGCATTCCTGTGGCTCCTGAG
CAGAAAGGAGACTCGGACGCCGGAGGGGGGGACGTTCGGGTTCGCCTTCC
TGCTCGTGTTCGTGGTGGCGACGATCCCCGCGGGGATCTACG GTGAGAGC
GGGGGTGTATTTTGTATTTGCCTGCTGTGCGCTTGCTCCTCGCGTGTGCT
CGTAAACACGCACACGCTTCGTAGGAGACTTGGGGGTGAGCTACGAGGTC
ACGAAAGGCAGGCGCTTCCAGACCGAGAGAGAGGCTCTAGACTATAGGAG
TATAGATATGTAGTTGTCGCATGAGGGGTCTTGTCTTGAGTGGGACGATG
TTCCAAGTCCGCCGACGAGAAGAAGCACTGATCTAGTTTAGTTGCACAAC
GCGTCGGGGGTTAACAAACCCCGGGGGTTGGCGCGGACCCTATCCGCAGG
GTCCGACGGCACAACTCCCCTCTCCTCGCACACCCCACCCCTGTGCGGAT
AAATAAGGCAGCGGATAAATACTTCAGCTTTTTTTTTCTCGAAGGAACCG
CCCTGAAAGCCATACCTCCCGTCTACAATATATCCCCCCGTCTGTGCGCG
CTGATGTTGCCAATGCTTGAAACGACGGCACAATTCCACTGCAGCCAAGA
CGGAGTACAACGAGATCCTCGCCAACGTGGACTACCTTCACGGCGTCGCG
GAGTCGTTCCTTACGATCACGAACCTCTTCATCGTGTCTGCGTTCCGGAA
AGCGGTCGTCAGCCAGCAGCCGACCGCGAGCGGTGAGGGGGCTACACAGA
GT back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5115:3105..3906-
>mRNA_L-elsbetiae_contig5115.13175.1 ID=mRNA_L-elsbetiae_contig5115.13175.1|Name=mRNA_L-elsbetiae_contig5115.13175.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig5115:3105..3906- (Laminarionema elsbetiae ELsaHSoW15) CTGTTCCAGGCCTCGCTGCTGCCGTACCTCGCATTCCTGTGGCTCCTGAG CAGAAAGGAGACTCGGACGCCGGAGGGGGGGACGTTCGGGTTCGCCTTCC TGCTCGTGTTCGTGGTGGCGACGATCCCCGCGGGGATCTACGCTGTTCCA GGCCTCGCTGCTGCCGTACCTCGCATTCCTGTGGCTCCTGAGCAGAAAGG AGACTCGGACGCCGGAGGGGGGGACGTTCGGGTTCGCCTTCCTGCTCGTG TTCGTGGTGGCGACGATCCCCGCGGGGATCTACGCCAAGACGGAGTACAA CGAGATCCTCGCCAACGTGGACTACCTTCACGGCGTCGCGGAGTCGTTCC TTACGATCACGAACCTCTTCATCGTGTCTGCGTTCCGGAAAGCGGTCGTC AGCCAGCAGCCGACCGCGAGCGGTGAGGGGGCTACACAGAGTCCAAGACG GAGTACAACGAGATCCTCGCCAACGTGGACTACCTTCACGGCGTCGCGGA GTCGTTCCTTACGATCACGAACCTCTTCATCGTGTCTGCGTTCCGGAAAG CGGTCGTCAGCCAGCAGCCGACCGCGAGCGGTGAGGGGGCTACACAGAGT back to top