mRNA_L-elsbetiae_contig5036.13058.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5036.13058.1
Unique NamemRNA_L-elsbetiae_contig5036.13058.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: D8LFS4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS4_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 2.790e-127
Identity = 191/253 (75.49%), Postives = 220/253 (86.96%), Query Frame = 3
Query:  258 SENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTKA 1016
            S N DID SER VFIRPT+FAGFGAISFAFV QS+SFLVYRSMSKGGVDRWA V+RWSVSIAL +G+TLAL GY NFV++T+ NILNN  T H  A++AR FLALTMVFTYPMEMYVARH +DV+VFQT LGKGPTT ARH+G+++ +W LS++LA ST NLGSILEIFGAF A+AVGY+MPALLF+K NR +  RA+AVW KG+PEY PALGERLWAM+ F+VPMFMV FG++AMVAGVATAV SELSPTKA
Sbjct:  215 STNDDIDSSERFVFIRPTVFAGFGAISFAFVSQSASFLVYRSMSKGGVDRWACVTRWSVSIALGLGLTLALSGYLNFVNETDANILNNLGTRHGPANIARAFLALTMVFTYPMEMYVARHALDVAVFQTWLGKGPTTQARHFGISIALWVLSIVLAASTKNLGSILEIFGAFSANAVGYVMPALLFIKSNREEFSRASAVWKKGTPEYHPALGERLWAMQNFFVPMFMVFFGILAMVAGVATAVASELSPTKA 467          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 5.200e-113
Identity = 179/252 (71.03%), Postives = 207/252 (82.14%), Query Frame = 3
Query:  261 ENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTKA 1016
            E PD+DRS+   FIRPTIFAGFGAISF+FVCQ SSFLVYRSMS+ GVDRWA+V+RW+VSIAL M +TL + GY +F D TEGNILNNF+ EH  A+VAR FLALTMV TYP+EMYVARHV+D S+FQT LGKGP T  RHY +TV IW L+L LALST NLGS+LEIFGAFGASA+GY++P LL+MK    +LR+A A W K S EY+PAL ERLWA R F VP+FMV+FGV+AMVAGV TAVV ELS TKA
Sbjct:  215 ELPDVDRSDVNTFIRPTIFAGFGAISFSFVCQHSSFLVYRSMSERGVDRWATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHYWITVIIWVLTLTLALSTANLGSVLEIFGAFGASAIGYVLPPLLYMKSCGHELRQAKAAWDKDSSEYEPALTERLWASRNFIVPVFMVLFGVVAMVAGVVTAVVGELSHTKA 466          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A836CLI3_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.080e-68
Identity = 124/244 (50.82%), Postives = 163/244 (66.80%), Query Frame = 3
Query:  273 IDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGG--VDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSE 998
            IDR++   F R T+FAG GAISFAFVCQSS+F+VYRS+ +G   V  W S++  S+SIA AM M +A  GY +F DQT G+ILNNFS   AAA+ AR FLA+ M+ TYPMEM VARHV+D SV + +L        RH  +T+ IW  + + AL+TD+LG++LEIFGAF AS +GY++P+LL++K + G+LR A  VW      Y P+  ER  A R FY   FM  FG +A VAG  T ++  
Sbjct:  254 IDRTDIFTFARGTLFAGLGAISFAFVCQSSTFIVYRSLGEGARSVASWTSITHMSLSIAWAMTMAMATLGYLSFGDQTRGDILNNFSARGAAAAAARAFLAVAMLLTYPMEMVVARHVLDASVCRALLRWEEARLGRHMVITILIWAATTVTALATDDLGAVLEIFGAFAASVIGYVLPSLLYLKSHEGELRAAALVWKGAGGAYAPSWRERAAAFRPFYWAFFMAAFGAVACVAGTVTTILDN 497          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A2R5GEI9_9STRA (Amino acid transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEI9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 7.150e-49
Identity = 110/256 (42.97%), Postives = 155/256 (60.55%), Query Frame = 3
Query:  258 SENPDIDRSE---RLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPT-------TPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFN--RGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAV 989
            SE P+ DR        F   +IFAGFGAISFA+VCQ SSF+V+ ++       W  V+  +VS A+ M + L+L GY  F +QT  NILNNF      ++VAR  LALTMVFT+PME +VARH    S+F    G  PT       + A H+GLT+ +W ++ I+ ++  +LG I+E+ GA  AS +G+I+PA+   K +  R    ++   W K  P Y+  L  RL A+R F+VP+FM+V G++AM+AG  TAV
Sbjct:  253 SEWPEADRGPIEPEFTFANSSIFAGFGAISFAYVCQHSSFIVFNTLKVPTTREWDRVNTGAVSTAMIMSVLLSLAGYLAFFNQTLPNILNNFPCNDNVSNVARFLLALTMVFTFPMENFVARH----SLFAIYHGFSPTLKGSRRMSSAWHFGLTLGLWGVATIIGVAVTDLGIIIELTGALSASMLGFILPAMCHFKVHSLRITWNKSIKAWDKDHPFYRTTLSGRLAALRDFWVPLFMLVVGIVAMIAGTYTAV 504          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A7S3LKT7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKT7_9STRA)

HSP 1 Score: 150 bits (379), Expect = 9.310e-39
Identity = 84/220 (38.18%), Postives = 134/220 (60.91%), Query Frame = 3
Query:  333 ISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFS-TEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAV 989
            +SFAFVCQ S+F+V+ ++    V  W  V+  S++I   + + L+L GY +F ++T+ NILNNF  T   A   ARMFLA+TM+ T+PME++VARH ++  +F       P    RH  +T+++WTL+LI+AL+  NLG +LE+ GAF  S +GYI PAL ++K  R + +    V++      +  +  +++     +    M++FGVIAM+ G   A+
Sbjct:    1 MSFAFVCQHSTFIVFNTLKIPTVRVWRRVAIGSLTIVGLLSILLSLSGYLSFFNETQANILNNFPRTGEPAIDAARMFLAMTMILTFPMELFVARHALNNIIFGDPSNM-PIPTTRHVVITLSLWTLALIVALTVSNLGLVLELVGAFSGSMIGYIFPALCYLKVRRKNRKALKRVYSDRDLSDERLISSKVFDFH-LWANYSMLIFGVIAMITGSVLAI 218          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0G4IJK5_PLABS (Aa_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJK5_PLABS)

HSP 1 Score: 155 bits (391), Expect = 4.200e-38
Identity = 91/242 (37.60%), Postives = 139/242 (57.44%), Query Frame = 3
Query:  300 IRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPA--RHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNR--GDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTK 1013
            + PT+FAG GA+SFAFVC  +SF+V+ SMS     RW  VS  SV  AL + + L L G  NF    + +ILNNF  +      AR+ L ++MV TYPMEM+VARH +     +   G     P+  +H   ++ +WT ++++A++  + G +LE+ GA  AS +GYI+P L+++   +   D  RA  V        +P L +RL+   +   P+F+VVFG +A+VAG +TA+     P +
Sbjct:  217 LEPTLFAGIGAMSFAFVCNHNSFIVFNSMSNPTPQRWRGVSAISVGFALVLSLALGLAGAINFGQFAQPDILNNFPEDDILIIAARIMLGVSMVMTYPMEMFVARHCL----LEVASGGEVGEPSFWKHAAASLFLWTSTMVIAITVPDFGVVLELTGALTASCLGYILPGLIYLSVVKFPADAIRAWRVDPATGARGEPDLRKRLYETFKDIGPIFLVVFGAVALVAGTSTALTDLAGPIE 454          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0H5QQI6_9EUKA (Aa_trans domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQI6_9EUKA)

HSP 1 Score: 139 bits (349), Expect = 3.040e-32
Identity = 85/257 (33.07%), Postives = 139/257 (54.09%), Query Frame = 3
Query:  231 PCLSKRRICSENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGD--LRRATAVWAKGSPEY---QPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATA 986
            P  +++   +EN     S  +  I  T+FAG G +SFAFVC  S+F+V+ S+      RW  ++  SV  A  M     + GY NF   T+ +IL NF       +++R+ L  TM+FTYPMEM+VARH +     Q +  +   +  ++   +V+++  +L +A++  ++G ++E+ GA  AS VGYI+P  +++K    +   R A AVW +   +     P + +   A R    P+ +V FG++AMVAG  TA
Sbjct:  213 PAAAQQMTLAEN---QTSSAISVIESTLFAGIGTMSFAFVCNHSAFIVFNSLDHPTPSRWRLITNISVGFAFFMCFIFGVSGYVNFRQSTKADILGNFPASDEVMNISRVMLVTTMIFTYPMEMFVARHCI----LQVVTQEEHCSYWKYALASVSLFAATLAIAITVPDVGIVIEVTGAISASCVGYILPGFIYLKMTGYEEVKRNALAVWNRAPNDVGDKPPFMNQVRMATRDVG-PLMLVGFGILAMVAGTVTA 461          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0C3JLD8_PISTI (Aa_trans domain-containing protein n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3JLD8_PISTI)

HSP 1 Score: 135 bits (341), Expect = 2.630e-31
Identity = 74/188 (39.36%), Postives = 105/188 (55.85%), Query Frame = 3
Query:  276 DRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDL 839
            D S R   + P +F   G ISFAFVC  +S L+Y S+ K  +DR+A V+ +S +I+L    TLA+  +WNF D+T+GN+LNNF   +   +VAR    L M  T P+E++V R V++    Q         P RH   T TI   S+ L+L T +LG  LEI G   A+A+ +I PA  ++K     L
Sbjct:  213 DPSARFTILGPGVFPAIGVISFAFVCHHNSLLIYGSLRKPTLDRFAQVTHFSTAISLVACCTLAISAFWNFTDKTQGNVLNNFPANNTLINVARFCFGLNMFTTLPLELFVCREVIE----QYFFSHESFNPQRHLFFTTTIIISSMFLSLITCDLGVTLEITGGVSATALAFIFPAACYLKLANPSL 396          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0C3E906_9AGAM (Aa_trans domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3E906_9AGAM)

HSP 1 Score: 134 bits (337), Expect = 1.070e-30
Identity = 76/188 (40.43%), Postives = 104/188 (55.32%), Query Frame = 3
Query:  276 DRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDL 839
            D S+RL  I P +F   G +SFAFVC  +S L+Y S+ K  +DR+A V+  S +I+L    TLA+  +WNF D+T+GNILNNF       +VAR    L M  T P+E++V R V++    Q           RH   T TI   S+ LAL T +LG  LEI G   A+A+ +I PA  ++K     L
Sbjct:  223 DPSKRLTIIGPGVFPAIGVMSFAFVCHHNSLLIYGSLQKPTIDRFARVTHISTAISLVACCTLAISAFWNFTDKTQGNILNNFPPNDTLINVARFCFGLNMFTTLPLELFVCREVIE----QYFFSHESFNLQRHVFFTTTILVSSMFLALITCDLGVTLEITGGVSATALAFIFPAACYLKLANPSL 406          
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A6H0XS57_9PEZI (Aa_trans domain-containing protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XS57_9PEZI)

HSP 1 Score: 135 bits (341), Expect = 1.130e-30
Identity = 74/190 (38.95%), Postives = 112/190 (58.95%), Query Frame = 3
Query:  294 VFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWA 863
            + I   +F   G ISFAFVC  +S L+Y S+ K  +DR+A V+ +S  I++   +T+ALGGY +F DQT+GN+LNNF +++   ++AR+   L M+ T P+E +V R V+    F    G+ P  P RH   T ++   ++ LAL T +LG + E+ GA  A A+ YI+P L F+K  +       A WA
Sbjct:  333 ILINDGVFQAIGVISFAFVCHHNSLLIYGSLKKPTMDRFAQVTHYSTGISMVACLTMALGGYISFGDQTKGNVLNNFPSDNVVVNIARLCFGLNMLTTLPLECFVCREVMTEYYFP---GE-PYQPNRHLIFTTSLVLSAMSLALLTCDLGIVFELVGATSACALAYILPPLCFLKLTKRKTWETYAAWA 518          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS4_ECTSI2.790e-12775.49Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
D8LFS5_ECTSI5.200e-11371.03Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CLI3_9STRA5.080e-6850.82Transmembrane amino acid transporter protein-domai... [more]
A0A2R5GEI9_9STRA7.150e-4942.97Amino acid transporter, putative n=1 Tax=Hondaea f... [more]
A0A7S3LKT7_9STRA9.310e-3938.18Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A0G4IJK5_PLABS4.200e-3837.60Aa_trans domain-containing protein n=1 Tax=Plasmod... [more]
A0A0H5QQI6_9EUKA3.040e-3233.07Aa_trans domain-containing protein n=1 Tax=Spongos... [more]
A0A0C3JLD8_PISTI2.630e-3139.36Aa_trans domain-containing protein n=1 Tax=Pisolit... [more]
A0A0C3E906_9AGAM1.070e-3040.43Aa_trans domain-containing protein n=1 Tax=Sclerod... [more]
A0A6H0XS57_9PEZI1.130e-3038.95Aa_trans domain-containing protein n=1 Tax=Peltast... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5036contigL-elsbetiae_contig5036:848..3525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.2
Seed ortholog evalue9.7e-106
Seed eggNOG ortholog2880.D8LFS4
Preferred nameSLC38A11
KEGG koko:K14997
KEGG TC2.A.18.6
Hectar predicted targeting categoryother localisation
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0012505,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.amino acid
EggNOG OGsCOG0814@1,KOG1305@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionCytochrome c oxidase subunit Vb.
Ec32 orthologEc-01_001120.1
Exons3
Model size1558
Cds size1002
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5036.13058.1prot_L-elsbetiae_contig5036.13058.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5036 865..2986 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816508.5515797-UTR-L-elsbetiae_contig5036:847..8641622816508.5515797-UTR-L-elsbetiae_contig5036:847..864Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5036 848..864 +
1691683610.4994638-UTR-L-elsbetiae_contig5036:847..8641691683610.4994638-UTR-L-elsbetiae_contig5036:847..864Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5036 848..864 +
1622816508.597119-UTR-L-elsbetiae_contig5036:2986..35251622816508.597119-UTR-L-elsbetiae_contig5036:2986..3525Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5036 2987..3525 +
1691683610.55794-UTR-L-elsbetiae_contig5036:2986..35251691683610.55794-UTR-L-elsbetiae_contig5036:2986..3525Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5036 2987..3525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816508.5644488-CDS-L-elsbetiae_contig5036:864..14251622816508.5644488-CDS-L-elsbetiae_contig5036:864..1425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 865..1425 +
1691683610.5182211-CDS-L-elsbetiae_contig5036:864..14251691683610.5182211-CDS-L-elsbetiae_contig5036:864..1425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 865..1425 +
1622816508.575319-CDS-L-elsbetiae_contig5036:2013..22171622816508.575319-CDS-L-elsbetiae_contig5036:2013..2217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 2014..2217 +
1691683610.5354514-CDS-L-elsbetiae_contig5036:2013..22171691683610.5354514-CDS-L-elsbetiae_contig5036:2013..2217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 2014..2217 +
1622816508.586314-CDS-L-elsbetiae_contig5036:2749..29861622816508.586314-CDS-L-elsbetiae_contig5036:2749..2986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 2750..2986 +
1691683610.5475655-CDS-L-elsbetiae_contig5036:2749..29861691683610.5475655-CDS-L-elsbetiae_contig5036:2749..2986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5036 2750..2986 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5036.13058.1

>prot_L-elsbetiae_contig5036.13058.1 ID=prot_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp
MPDALPVLARLPPTPGARTNPTHTSNRGRSYNTTRRGTFLLALPFSVLHA
PVAAAPALPTACCFPYPSPPTPCLSKRRICSENPDIDRSERLVFIRPTIF
AGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLA
LGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARH
VVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFG
AFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMR
QFYVPMFMVVFGVIAMVAGVATAVVSELSPTKA*
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mRNA from alignment at L-elsbetiae_contig5036:848..3525+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5036.13058.1 ID=mRNA_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2678bp|location=Sequence derived from alignment at L-elsbetiae_contig5036:848..3525+ (Laminarionema elsbetiae ELsaHSoW15)
CGTGATTTTGGGGTCTGATGCCTGATGCTCTGCCGGTTCTCGCCCGTCTA CCTCCCACGCCGGGGGCACGCACGAACCCCACTCACACGAGCAACCGTGG GAGGTCCTACAACACCACACGGCGCGGAACTTTCTTGCTCGCTCTCCCAT TCTCTGTTCTTCACGCGCCTGTCGCCGCCGCCCCGGCATTACCGACCGCG TGTTGCTTTCCTTACCCCTCCCCCCCCACTCCCTGCCTCTCGAAACGCCG GATTTGCAGCGAAAACCCGGACATCGACCGGTCGGAGAGACTCGTCTTCA TACGCCCCACGATCTTCGCTGGTTTCGGCGCGATATCGTTCGCCTTCGTG TGCCAGAGCTCGTCGTTCCTGGTGTACCGGAGCATGTCGAAGGGGGGCGT GGACCGGTGGGCGTCCGTCAGCAGGTGGTCGGTGTCCATCGCGTTGGCGA TGGGGATGACCCTTGCCCTCGGCGGATACTGGAACTTCGTGGACCAGACG GAAGGGAACATTCTCAACAACTTCTCGACCGAGCACGCGGCCGCTAGCGT TGCTCGAATGTTCTTGGCGCTGACCATGGTGAGAGCGGGGGAGGGGGGGG GGGTTGTGTCTGGCGGCATGCTTGATGAGAGGCATTTTGTATTTTGGCCC CCGTGCGGCTTGGCAGGAGGCAGTGACACGAGCTTTGCTGCGAGCTTGAG CAGCTTTGGTTGCTTTTCTCGAGGGAGGTTGCTTGCGTGCGTCAATATGC CAACATGCTGTGTTACCTCATATAGGTTAAACAGGCGAGATGTATTAATT GTAGTTCCAACCGAGAATGCTTCGCCCACTCTGCCTCTCTCTGTAGAGCT GGGAGAGATGGACAACGTGAATGCTCGCCAAGAAGCAAAGCGACTTCCCT GTACTGTATGTACTCAGCACACGCCTAAATAGATATGGAAAACGTCCACC GCGGCGAGTGTAGGTGAACGCTGTTATTAGGAACATGTTATAGGGACCAT GTTCCGCGCGACTGGCTCGGTTCTTTGTTTGTGCCCGCTCCGCCACTTCG CGCCCGCACGCATCATCTAAATGTACAGCGACTGCCCCCAGCAGAAATAA TGTTTTCCGATTCGTCTTGGGATGTCAAAACCCGTGCGCTTCTTCTCGGC TTCGAATATACCATAGGTCTTCACATACCCCATGGAGATGTACGTGGCCA GGCACGTGGTTGACGTGTCTGTTTTCCAGACGATGCTCGGAAAGGGCCCG ACCACCCCAGCGCGGCACTACGGGCTCACTGTTACGATCTGGACACTGTC ACTAATACTGGCGCTGTCAACGGACAACCTTGGCTCCATCCTCGAGATCT TTGGCGCCTTCGGCGCTAGCGTGAGTGTGGGCTCCCGCGGGGGGCAGGCT CTGATGTGCCTGTTTTGAGTCACGTCGCTTTATCTCACATATTGATGCAT TCATTCGCGAGTGGTACATAGCTTCCAGTAGTTTTTTATGTAGTCGGCGA TCTGCGTGTACAGCAGTAAGTCAAAGTAGCCGAGTCTTGCTGGACGCGAA TCCGAGAGGTATTTTTTTTCATGTTGGTGGGGGAACACAGCGGTGCGAAG TCTGAGGTTTGTCGTGGTCATACATAGCCGACCGCTGTTTCTCTGGGATT CTCTTAACGCTCTTCGAAAGCTCCTCCAAACAGACTTGCCGTGCAACAGG TGGGGTTGGTTGCAGGCGTAGAGCAGGTTTATCCACGAGTGAAGAACGGG GAAGGAAGGAAAAGCGCAAAAGCTTCGTTTCTGCCAGATTCGAGAGCCCT CTGGTACGCACCGACAACTCAATGCTGCTTAATCGAACCCAAAATCGACC GAACCTGCTCGCTCCATGAACCCAATCGAATTTCCACATGCGATGCGCGC AGGCGGTTGGGTACATCATGCCAGCGCTGCTCTTCATGAAGTTCAACCGA GGGGATCTGCGGCGAGCAACGGCGGTTTGGGCGAAAGGGTCCCCGGAGTA CCAGCCGGCGCTCGGAGAGCGGCTGTGGGCCATGCGACAGTTTTATGTGC CCATGTTCATGGTTGTTTTCGGTGTGATTGCAATGGTTGCAGGAGTAGCG ACGGCCGTAGTTTCGGAGCTTTCGCCAACGAAGGCGTGAGCAGGTGGGTG CTAGTATTGCTACTATAAGATAGCAATGTAGATAAGTGATCGTCGTATTC GTTGTTCGCAATAATTAGCTCATCGCCAGAAAAAAAACACCAATCTGGCC ACAAAGAAATCGGCTAAACTACACGATTTTCATGCGTGACCAGAGTGCGT GTGCAGGATTGAGGTTGTACTGAGGGAATGGGCCAAGCGCGATCCTCTGC ATGTAGAACGCGAAGAGAGATCGACTAAGTTAAAAATACAACTCGGGTAA ATAGCGGCGGCTGGATTTTTTTGTAGGTGGTGCACTTGCTTTGCAATGTT TCGCTAGGAACCCGCGCGAAAACCGAGAAGGGGAAGCAAAGACATTTTGC GGGTGTGCTGAGTTTGGGCTGCGAGCGCTTACCCGGGTTGAAGGGTGCGC TGCTGGTGGGTGTGTTCCGCGAGGGTGCAGACCGTCTTGGTTGTGTTACA ATAGGCGCTTACAGCTTCAGGGAGCTGTCAGATGCGCATGTATATTCAAG AGAGAAGGACCGTGGGACATGTTGCGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5036:848..3525+

>mRNA_L-elsbetiae_contig5036.13058.1 ID=mRNA_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2004bp|location=Sequence derived from alignment at L-elsbetiae_contig5036:848..3525+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTGATGCTCTGCCGGTTCTCGCCCGTCTACCTCCCACGCCGGGGGC
ACGCACGAACCCCACTCACACGAGCAACCGTGGGAGGTCCTACAACACCA
CACGGCGCGGAACTTTCTTGCTCGCTCTCCCATTCTCTGTTCTTCACGCG
CCTGTCGCCGCCGCCCCGGCATTACCGACCGCGTGTTGCTTTCCTTACCC
CTCCCCCCCCACTCCCTGCCTCTCGAAACGCCGGATTTGCAGCGAAAACC
CGGACATCGACCGGTCGGAGAGACTCGTCTTCATACGCCCCACGATCTTC
GCTGGTTTCGGCGCGATATCGTTCGCCTTCGTGTGCCAGAGCTCGTCGTT
CCTGGTGTACCGGAGCATGTCGAAGGGGGGCGTGGACCGGTGGGCGTCCG
TCAGCAGGTGGTCGGTGTCCATCGCGTTGGCGATGGGGATGACCCTTGCC
CTCGGCGGATACTGGAACTTCGTGGACCAGACGGAAGGGAACATTCTCAA
CAACTTCTCGACCGAGCACGCGGCCGCTAGCGTTGCTCGAATGTTCTTGG
CGCTGACCATGATGCCTGATGCTCTGCCGGTTCTCGCCCGTCTACCTCCC
ACGCCGGGGGCACGCACGAACCCCACTCACACGAGCAACCGTGGGAGGTC
CTACAACACCACACGGCGCGGAACTTTCTTGCTCGCTCTCCCATTCTCTG
TTCTTCACGCGCCTGTCGCCGCCGCCCCGGCATTACCGACCGCGTGTTGC
TTTCCTTACCCCTCCCCCCCCACTCCCTGCCTCTCGAAACGCCGGATTTG
CAGCGAAAACCCGGACATCGACCGGTCGGAGAGACTCGTCTTCATACGCC
CCACGATCTTCGCTGGTTTCGGCGCGATATCGTTCGCCTTCGTGTGCCAG
AGCTCGTCGTTCCTGGTGTACCGGAGCATGTCGAAGGGGGGCGTGGACCG
GTGGGCGTCCGTCAGCAGGTGGTCGGTGTCCATCGCGTTGGCGATGGGGA
TGACCCTTGCCCTCGGCGGATACTGGAACTTCGTGGACCAGACGGAAGGG
AACATTCTCAACAACTTCTCGACCGAGCACGCGGCCGCTAGCGTTGCTCG
AATGTTCTTGGCGCTGACCATGGTCTTCACATACCCCATGGAGATGTACG
TGGCCAGGCACGTGGTTGACGTGTCTGTTTTCCAGACGATGCTCGGAAAG
GGCCCGACCACCCCAGCGCGGCACTACGGGCTCACTGTTACGATCTGGAC
ACTGTCACTAATACTGGCGCTGTCAACGGACAACCTTGGCTCCATCCTCG
AGATCTTTGGCGCCTTCGGCGCTAGCGTCTTCACATACCCCATGGAGATG
TACGTGGCCAGGCACGTGGTTGACGTGTCTGTTTTCCAGACGATGCTCGG
AAAGGGCCCGACCACCCCAGCGCGGCACTACGGGCTCACTGTTACGATCT
GGACACTGTCACTAATACTGGCGCTGTCAACGGACAACCTTGGCTCCATC
CTCGAGATCTTTGGCGCCTTCGGCGCTAGCGCGGTTGGGTACATCATGCC
AGCGCTGCTCTTCATGAAGTTCAACCGAGGGGATCTGCGGCGAGCAACGG
CGGTTTGGGCGAAAGGGTCCCCGGAGTACCAGCCGGCGCTCGGAGAGCGG
CTGTGGGCCATGCGACAGTTTTATGTGCCCATGTTCATGGTTGTTTTCGG
TGTGATTGCAATGGTTGCAGGAGTAGCGACGGCCGTAGTTTCGGAGCTTT
CGCCAACGAAGGCGTGAGCGGTTGGGTACATCATGCCAGCGCTGCTCTTC
ATGAAGTTCAACCGAGGGGATCTGCGGCGAGCAACGGCGGTTTGGGCGAA
AGGGTCCCCGGAGTACCAGCCGGCGCTCGGAGAGCGGCTGTGGGCCATGC
GACAGTTTTATGTGCCCATGTTCATGGTTGTTTTCGGTGTGATTGCAATG
GTTGCAGGAGTAGCGACGGCCGTAGTTTCGGAGCTTTCGCCAACGAAGGC
GTGA
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