mRNA_L-elsbetiae_contig5036.13058.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: D8LFS4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS4_ECTSI) HSP 1 Score: 388 bits (997), Expect = 2.790e-127 Identity = 191/253 (75.49%), Postives = 220/253 (86.96%), Query Frame = 3 Query: 258 SENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTKA 1016 S N DID SER VFIRPT+FAGFGAISFAFV QS+SFLVYRSMSKGGVDRWA V+RWSVSIAL +G+TLAL GY NFV++T+ NILNN T H A++AR FLALTMVFTYPMEMYVARH +DV+VFQT LGKGPTT ARH+G+++ +W LS++LA ST NLGSILEIFGAF A+AVGY+MPALLF+K NR + RA+AVW KG+PEY PALGERLWAM+ F+VPMFMV FG++AMVAGVATAV SELSPTKA Sbjct: 215 STNDDIDSSERFVFIRPTVFAGFGAISFAFVSQSASFLVYRSMSKGGVDRWACVTRWSVSIALGLGLTLALSGYLNFVNETDANILNNLGTRHGPANIARAFLALTMVFTYPMEMYVARHALDVAVFQTWLGKGPTTQARHFGISIALWVLSIVLAASTKNLGSILEIFGAFSANAVGYVMPALLFIKSNREEFSRASAVWKKGTPEYHPALGERLWAMQNFFVPMFMVFFGILAMVAGVATAVASELSPTKA 467
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI) HSP 1 Score: 352 bits (902), Expect = 5.200e-113 Identity = 179/252 (71.03%), Postives = 207/252 (82.14%), Query Frame = 3 Query: 261 ENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTKA 1016 E PD+DRS+ FIRPTIFAGFGAISF+FVCQ SSFLVYRSMS+ GVDRWA+V+RW+VSIAL M +TL + GY +F D TEGNILNNF+ EH A+VAR FLALTMV TYP+EMYVARHV+D S+FQT LGKGP T RHY +TV IW L+L LALST NLGS+LEIFGAFGASA+GY++P LL+MK +LR+A A W K S EY+PAL ERLWA R F VP+FMV+FGV+AMVAGV TAVV ELS TKA Sbjct: 215 ELPDVDRSDVNTFIRPTIFAGFGAISFSFVCQHSSFLVYRSMSERGVDRWATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHYWITVIIWVLTLTLALSTANLGSVLEIFGAFGASAIGYVLPPLLYMKSCGHELRQAKAAWDKDSSEYEPALTERLWASRNFIVPVFMVLFGVVAMVAGVVTAVVGELSHTKA 466
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A836CLI3_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI3_9STRA) HSP 1 Score: 236 bits (602), Expect = 5.080e-68 Identity = 124/244 (50.82%), Postives = 163/244 (66.80%), Query Frame = 3 Query: 273 IDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGG--VDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSE 998 IDR++ F R T+FAG GAISFAFVCQSS+F+VYRS+ +G V W S++ S+SIA AM M +A GY +F DQT G+ILNNFS AAA+ AR FLA+ M+ TYPMEM VARHV+D SV + +L RH +T+ IW + + AL+TD+LG++LEIFGAF AS +GY++P+LL++K + G+LR A VW Y P+ ER A R FY FM FG +A VAG T ++ Sbjct: 254 IDRTDIFTFARGTLFAGLGAISFAFVCQSSTFIVYRSLGEGARSVASWTSITHMSLSIAWAMTMAMATLGYLSFGDQTRGDILNNFSARGAAAAAARAFLAVAMLLTYPMEMVVARHVLDASVCRALLRWEEARLGRHMVITILIWAATTVTALATDDLGAVLEIFGAFAASVIGYVLPSLLYLKSHEGELRAAALVWKGAGGAYAPSWRERAAAFRPFYWAFFMAAFGAVACVAGTVTTILDN 497
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A2R5GEI9_9STRA (Amino acid transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEI9_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.150e-49 Identity = 110/256 (42.97%), Postives = 155/256 (60.55%), Query Frame = 3 Query: 258 SENPDIDRSE---RLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPT-------TPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFN--RGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAV 989 SE P+ DR F +IFAGFGAISFA+VCQ SSF+V+ ++ W V+ +VS A+ M + L+L GY F +QT NILNNF ++VAR LALTMVFT+PME +VARH S+F G PT + A H+GLT+ +W ++ I+ ++ +LG I+E+ GA AS +G+I+PA+ K + R ++ W K P Y+ L RL A+R F+VP+FM+V G++AM+AG TAV Sbjct: 253 SEWPEADRGPIEPEFTFANSSIFAGFGAISFAYVCQHSSFIVFNTLKVPTTREWDRVNTGAVSTAMIMSVLLSLAGYLAFFNQTLPNILNNFPCNDNVSNVARFLLALTMVFTFPMENFVARH----SLFAIYHGFSPTLKGSRRMSSAWHFGLTLGLWGVATIIGVAVTDLGIIIELTGALSASMLGFILPAMCHFKVHSLRITWNKSIKAWDKDHPFYRTTLSGRLAALRDFWVPLFMLVVGIVAMIAGTYTAV 504
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A7S3LKT7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKT7_9STRA) HSP 1 Score: 150 bits (379), Expect = 9.310e-39 Identity = 84/220 (38.18%), Postives = 134/220 (60.91%), Query Frame = 3 Query: 333 ISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFS-TEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAV 989 +SFAFVCQ S+F+V+ ++ V W V+ S++I + + L+L GY +F ++T+ NILNNF T A ARMFLA+TM+ T+PME++VARH ++ +F P RH +T+++WTL+LI+AL+ NLG +LE+ GAF S +GYI PAL ++K R + + V++ + + +++ + M++FGVIAM+ G A+ Sbjct: 1 MSFAFVCQHSTFIVFNTLKIPTVRVWRRVAIGSLTIVGLLSILLSLSGYLSFFNETQANILNNFPRTGEPAIDAARMFLAMTMILTFPMELFVARHALNNIIFGDPSNM-PIPTTRHVVITLSLWTLALIVALTVSNLGLVLELVGAFSGSMIGYIFPALCYLKVRRKNRKALKRVYSDRDLSDERLISSKVFDFH-LWANYSMLIFGVIAMITGSVLAI 218
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0G4IJK5_PLABS (Aa_trans domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJK5_PLABS) HSP 1 Score: 155 bits (391), Expect = 4.200e-38 Identity = 91/242 (37.60%), Postives = 139/242 (57.44%), Query Frame = 3 Query: 300 IRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPA--RHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNR--GDLRRATAVWAKGSPEYQPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATAVVSELSPTK 1013 + PT+FAG GA+SFAFVC +SF+V+ SMS RW VS SV AL + + L L G NF + +ILNNF + AR+ L ++MV TYPMEM+VARH + + G P+ +H ++ +WT ++++A++ + G +LE+ GA AS +GYI+P L+++ + D RA V +P L +RL+ + P+F+VVFG +A+VAG +TA+ P + Sbjct: 217 LEPTLFAGIGAMSFAFVCNHNSFIVFNSMSNPTPQRWRGVSAISVGFALVLSLALGLAGAINFGQFAQPDILNNFPEDDILIIAARIMLGVSMVMTYPMEMFVARHCL----LEVASGGEVGEPSFWKHAAASLFLWTSTMVIAITVPDFGVVLELTGALTASCLGYILPGLIYLSVVKFPADAIRAWRVDPATGARGEPDLRKRLYETFKDIGPIFLVVFGAVALVAGTSTALTDLAGPIE 454
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0H5QQI6_9EUKA (Aa_trans domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQI6_9EUKA) HSP 1 Score: 139 bits (349), Expect = 3.040e-32 Identity = 85/257 (33.07%), Postives = 139/257 (54.09%), Query Frame = 3 Query: 231 PCLSKRRICSENPDIDRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGD--LRRATAVWAKGSPEY---QPALGERLWAMRQFYVPMFMVVFGVIAMVAGVATA 986 P +++ +EN S + I T+FAG G +SFAFVC S+F+V+ S+ RW ++ SV A M + GY NF T+ +IL NF +++R+ L TM+FTYPMEM+VARH + Q + + + ++ +V+++ +L +A++ ++G ++E+ GA AS VGYI+P +++K + R A AVW + + P + + A R P+ +V FG++AMVAG TA Sbjct: 213 PAAAQQMTLAEN---QTSSAISVIESTLFAGIGTMSFAFVCNHSAFIVFNSLDHPTPSRWRLITNISVGFAFFMCFIFGVSGYVNFRQSTKADILGNFPASDEVMNISRVMLVTTMIFTYPMEMFVARHCI----LQVVTQEEHCSYWKYALASVSLFAATLAIAITVPDVGIVIEVTGAISASCVGYILPGFIYLKMTGYEEVKRNALAVWNRAPNDVGDKPPFMNQVRMATRDVG-PLMLVGFGILAMVAGTVTA 461
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0C3JLD8_PISTI (Aa_trans domain-containing protein n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3JLD8_PISTI) HSP 1 Score: 135 bits (341), Expect = 2.630e-31 Identity = 74/188 (39.36%), Postives = 105/188 (55.85%), Query Frame = 3 Query: 276 DRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDL 839 D S R + P +F G ISFAFVC +S L+Y S+ K +DR+A V+ +S +I+L TLA+ +WNF D+T+GN+LNNF + +VAR L M T P+E++V R V++ Q P RH T TI S+ L+L T +LG LEI G A+A+ +I PA ++K L Sbjct: 213 DPSARFTILGPGVFPAIGVISFAFVCHHNSLLIYGSLRKPTLDRFAQVTHFSTAISLVACCTLAISAFWNFTDKTQGNVLNNFPANNTLINVARFCFGLNMFTTLPLELFVCREVIE----QYFFSHESFNPQRHLFFTTTIIISSMFLSLITCDLGVTLEITGGVSATALAFIFPAACYLKLANPSL 396
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A0C3E906_9AGAM (Aa_trans domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3E906_9AGAM) HSP 1 Score: 134 bits (337), Expect = 1.070e-30 Identity = 76/188 (40.43%), Postives = 104/188 (55.32%), Query Frame = 3 Query: 276 DRSERLVFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDL 839 D S+RL I P +F G +SFAFVC +S L+Y S+ K +DR+A V+ S +I+L TLA+ +WNF D+T+GNILNNF +VAR L M T P+E++V R V++ Q RH T TI S+ LAL T +LG LEI G A+A+ +I PA ++K L Sbjct: 223 DPSKRLTIIGPGVFPAIGVMSFAFVCHHNSLLIYGSLQKPTIDRFARVTHISTAISLVACCTLAISAFWNFTDKTQGNILNNFPPNDTLINVARFCFGLNMFTTLPLELFVCREVIE----QYFFSHESFNLQRHVFFTTTILVSSMFLALITCDLGVTLEITGGVSATALAFIFPAACYLKLANPSL 406
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Match: A0A6H0XS57_9PEZI (Aa_trans domain-containing protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XS57_9PEZI) HSP 1 Score: 135 bits (341), Expect = 1.130e-30 Identity = 74/190 (38.95%), Postives = 112/190 (58.95%), Query Frame = 3 Query: 294 VFIRPTIFAGFGAISFAFVCQSSSFLVYRSMSKGGVDRWASVSRWSVSIALAMGMTLALGGYWNFVDQTEGNILNNFSTEHAAASVARMFLALTMVFTYPMEMYVARHVVDVSVFQTMLGKGPTTPARHYGLTVTIWTLSLILALSTDNLGSILEIFGAFGASAVGYIMPALLFMKFNRGDLRRATAVWA 863 + I +F G ISFAFVC +S L+Y S+ K +DR+A V+ +S I++ +T+ALGGY +F DQT+GN+LNNF +++ ++AR+ L M+ T P+E +V R V+ F G+ P P RH T ++ ++ LAL T +LG + E+ GA A A+ YI+P L F+K + A WA Sbjct: 333 ILINDGVFQAIGVISFAFVCHHNSLLIYGSLKKPTMDRFAQVTHYSTGISMVACLTMALGGYISFGDQTKGNVLNNFPSDNVVVNIARLCFGLNMLTTLPLECFVCREVMTEYYFP---GE-PYQPNRHLIFTTSLVLSAMSLALLTCDLGIVFELVGATSACALAYILPPLCFLKLTKRKTWETYAAWA 518 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5036.13058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5036.13058.1 >prot_L-elsbetiae_contig5036.13058.1 ID=prot_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp MPDALPVLARLPPTPGARTNPTHTSNRGRSYNTTRRGTFLLALPFSVLHAback to top mRNA from alignment at L-elsbetiae_contig5036:848..3525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5036.13058.1 ID=mRNA_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2678bp|location=Sequence derived from alignment at L-elsbetiae_contig5036:848..3525+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5036:848..3525+ >mRNA_L-elsbetiae_contig5036.13058.1 ID=mRNA_L-elsbetiae_contig5036.13058.1|Name=mRNA_L-elsbetiae_contig5036.13058.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2004bp|location=Sequence derived from alignment at L-elsbetiae_contig5036:848..3525+ (Laminarionema elsbetiae ELsaHSoW15)back to top |