prot_L-elsbetiae_contig502.13034.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig502.13034.1
Unique Nameprot_L-elsbetiae_contig502.13034.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
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BLAST of mRNA_L-elsbetiae_contig502.13034.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.970e-30
Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 0 
Query:   14 GLLFRPTKARAKKVRQNVEGLWIIYQAKLLHPLDLDRWTEIFETTVSSLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQ 115
            G  F PT+ + +  RQ +E L+ ++QAKLLHPLD  RWT +  TTV+SLLS QPLQ LTK  RL V+M IVGSGR  L +PAVLAVLA DW D++ SFKLLQ
Sbjct:   62 GGAFLPTEFQMR--RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig502.13034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPW3_9PHAE1.970e-3060.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig502contigL-elsbetiae_contig502:17756..24331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig502.13034.1mRNA_L-elsbetiae_contig502.13034.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig502 16851..24371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig502.13034.1 ID=prot_L-elsbetiae_contig502.13034.1|Name=mRNA_L-elsbetiae_contig502.13034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MDVVGGQANPGEDGLLFRPTKARAKKVRQNVEGLWIIYQAKLLHPLDLDR
WTEIFETTVSSLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVL
ATDWSDEWASFKLLQDTVRQASLSHLRYEWGPNGPPELHVSRKHIADLLC
VGVEKTVASWRNLGIGGSARDAVEKAGRELRGLAAQCRGSSNRPAAGKLL
SCYLASHRKLNGSLKR*
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