mRNA_L-elsbetiae_contig5013.13024.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5013.13024.1
Unique NamemRNA_L-elsbetiae_contig5013.13024.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 1.810e-180
Identity = 261/283 (92.23%), Postives = 270/283 (95.41%), Query Frame = 2
Query:   11 MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            MVDISRH+DFLGP GKTLSVSERSGLQVSMMQR+REERLEG M+FWGKV GNENDYLVCYAL+TPTLEEGDFPLKKFYFCVS+DTSLR MPA+KPEYE LA AV GRLRGDPSLPLDEEPEXXXXXXXXXXXX PRPPERFLEMHRLAHIVKTIDRAVAVVPKGA LVEASRKIRPYRNFEGLS EAA+DLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKP GCWT+S NPSASCS+LRSLAWPGYFFFHEAET DYGGAYFGDGLPNTDLQFML
Sbjct:    1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 7.480e-115
Identity = 171/194 (88.14%), Postives = 177/194 (91.24%), Query Frame = 2
Query:  278 MPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            MP++KPEYE LA AV GRLRGDPSLPLDEEPE       XXXXX PRPPERFLEMHRLAHIVKTIDRAVAVVPKGA LVEASRKIRP+RNFEGLS EAA+DLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKP GCWT+S NPS SCS+LRSLAWPGYFFFHEAET DYGGAYFGDGLPNTDLQFML
Sbjct:    1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA)

HSP 1 Score: 318 bits (814), Expect = 8.880e-106
Identity = 159/284 (55.99%), Postives = 204/284 (71.83%), Query Frame = 2
Query:   11 MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVG--RLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            MVDI +H++FLGP+G +LS  ER+GLQVSM+QR++EE L   + FWGK+  +E DYL+CY+L  P LEEG FP++++Y+  S DT LRQMP L  E ++LA AV    R +GDPSLPLD EPE               PERF E+HRLA+ V  ID  VAV PKGA L+EASR++ P R FEGLS EAA ++R+YFH R PE+  A AALT+KGLV DADFLDP+A D+P G W+++ + + + + LRSLAWPGYFFF +  + ++GG YFG GLPNTDL FML
Sbjct:    1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQYYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAA--PERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.940e-92
Identity = 144/271 (53.14%), Postives = 183/271 (67.53%), Query Frame = 2
Query:   50 SGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLD--EEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            SG TLS+ E+SGL ++++QR +EE     + FWGK+ G E DYLV YAL    +   D P KKFY+C   D +LRQ+P L  EY  +A ++ GR +GDPS+PLD  EE E                ERF E+HRL + V+ IDR VAVVP+GAFL+EAS KI   RN+EGLS EAA DLR+YFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+++ + S +   LRS  WPGYFFFH+  T +YGG YFGDGL N DL FML
Sbjct:   13 SGCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKKFYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA)

HSP 1 Score: 247 bits (630), Expect = 7.120e-78
Identity = 133/281 (47.33%), Postives = 182/281 (64.77%), Query Frame = 2
Query:   41 LGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDT-SLRQMPALKPEYEALAGAV-VGRLRGDPSL-------PLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            LGP+G TLS+ ER+ LQ++M+  +R+E L G + FWGK+ G  NDYL+ YA+  PT     FP+KKFY+C +++  SL QMP+L  E+E LA    +   RGDPS          DEE E            P   E F E HRL + V+TID   +V+P+GAF+V+A+  +R  ++FEGLS +AA  L +Y+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W++  + S +  LLRS  WPGYFF+H  ETS+YGG YFGDG+ N D+ FML
Sbjct:    9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKKFYYCTASNGYSLVQMPSLTEEWEGLAKTWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNK-EVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN)

HSP 1 Score: 229 bits (584), Expect = 5.380e-71
Identity = 127/283 (44.88%), Postives = 175/283 (61.84%), Query Frame = 2
Query:   32 IDFLGPSGKTLSVSERSGLQVSMMQREREERLE-GNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTS-LRQMPALKPEYEALAGAVVGR-LRGDPSLPL-----DEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            ++FL PSG  LS+SER+GL ++M+Q  + E L  G++ FWG++ G  +DYLV  AL TP+     FP KKFY+  +  +  + QMP L  EY A A  +V +   G+PS+P      + E E               PE F E H+LA+ V  ID    VVP+GA+LV+A+ ++     +EGL+ EAA  LRSYFHFR P+S  A  AL K G+VR  DFLDPIA D PAG +++  +PS + +++RS  WPG +F+H+  T +YG  Y GDGLPNTD+QFML
Sbjct:    1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKFYYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO)

HSP 1 Score: 224 bits (572), Expect = 3.930e-69
Identity = 132/285 (46.32%), Postives = 178/285 (62.46%), Query Frame = 2
Query:   26 RHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPL---DEEPEXXXXXXXXXXXX---PRPPER--FLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            RH+D L  SG TLSV ER+GL+  M +R+ EE L  ++ FWG++   E DYLV Y    P+ E   +P K+FYFC +    L+  P L  E+      + G LRGDP L +   DEE  XXXXXXXXXXX    PR P++  F+E HRLAH V  +D  +++VP+GAF++  +  + P  +F GLSA  A    SY HFR P + E  + L ++G +RD DFLDP++ D+P+G W++  +     +L+RSL WPGYFF H   T  +GGAYFG+GLPN DL FML
Sbjct:    4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQFYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A812K779_9DINO (Rsph9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K779_9DINO)

HSP 1 Score: 227 bits (578), Expect = 1.140e-65
Identity = 132/274 (48.18%), Postives = 174/274 (63.50%), Query Frame = 2
Query:   50 SGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-----PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            SG TLSV E +GL+V++ +R  EE +  ++ FWG++ G+E DYLV YA+    ++   FP K+F+ C +    L+Q+P L  E++A A A+ G+ +GDP+    EE  XXXXXXXXXXXX     P  P +F E+HRLAH+V  ID   AVVP+GA+++ A+        F GL+A  A    +YFHFR  E +EA AA +K GLV   DFLD IA D P G W +  +     + LRSLAWPGYFF H   TS++GGAYFGDG PN DL FML
Sbjct:  437 SGNTLSVEEAAGLEVALAKRRLEEGVS-DVKFWGRITGSERDYLVAYAV----VDIEGFPHKRFFACSTGTFDLQQLPELSEEFKAQAAAIKGKFKGDPTNLYGEEEXXXXXXXXXXXXXGAEAKPPKPVKFSELHRLAHVVSCIDHDTAVVPRGAYILTATHATVRNATFGGLTATEAASPSNYFHFRAAEGLEAAAAASKDGLVASTDFLDSIATDSPKGTWVLRVDAGTGSATLRSLAWPGYFFSHTLGTSEFGGAYFGDGFPNEDLAFML 705          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC)

HSP 1 Score: 203 bits (517), Expect = 4.510e-61
Identity = 116/277 (41.88%), Postives = 160/277 (57.76%), Query Frame = 2
Query:   29 HIDFLGPS-GKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            H+D L    G TL+  ERS L++  ++R+  E + G M  WGK+ G   DY+VC A     +E  D P KKFYFC +T   L+Q P +  E    A A  GRL+GDPS P+DE  +                + F E+ RL  IV+ ID A ++VP GA++V A+  +   R F+GL+ + A+ L SY+H+R  +S E  +AL++ GLVR ADFLDPI++D   G W M  + + +  +LR L +PG  FFH+  T  YG AY GDGL N DL FML
Sbjct:    5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKKFYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK---------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266          
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A1V9YG94_9STRA (Radial spoke protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG94_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.270e-60
Identity = 118/277 (42.60%), Postives = 159/277 (57.40%), Query Frame = 2
Query:   29 HIDFLGPS-GKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856
            H+D +  S G TL+  ERS L+VS  +R   E +  +M FWGK+ G+  DY+VC A     +E  D P KKFYFC +T   L+Q P +  E   +A    GRL+GDPS P+DE  +                + F E+ RL  IV+ ID A ++VP GA++V A+ +I   R F+GLS + A  L SY+HFR  ES+E    L + GL+R ADFLDPI  D   G W +  + + +  +LR+L +PG   FH+  T  YG AYFGDGL N DL FML
Sbjct:    5 HLDIVSRSIGCTLTSQERSNLEVSFTRRYATEGIV-SMRFWGKIVGDAQDYVVCVAF----IEALDAPKKKFYFCTNTSPELQQFPEVGKEKRDMAIKYTGRLKGDPSRPMDENEDPQDDNNK---------DIFREVDRLVLIVEAIDAAASIVPCGAYVVSATHQIVANRLFQGLSWDRALQLGSYYHFRPAESVERKGVLAQPGLIRPADFLDPITIDLD-GVWDLRQDNTGAAVVLRNLQYPGSVGFHKPRTGAYGFAYFGDGLKNPDLAFML 266          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G3_ECTSI1.810e-18092.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZL4_9PHAE7.480e-11588.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YS21_9STRA8.880e-10655.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1U7_9STRA2.940e-9253.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H666_9STRA7.120e-7847.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YNP7_AURAN5.380e-7144.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5A8CDT7_CAFRO3.930e-6946.32Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A812K779_9DINO1.140e-6548.18Rsph9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A067CFY2_SAPPC4.510e-6141.88Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YG94_9STRA1.270e-6042.60Radial spoke protein n=1 Tax=Achlya hypogyna TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5013contigL-elsbetiae_contig5013:999..5539 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score508.8
Seed ortholog evalue1.6e-141
Seed eggNOG ortholog2880.D7G1G3
Preferred nameRSPH9
KEGG koko:K19757
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0032421,GO:0032838,GO:0035082,GO:0040011,GO:0042995,GO:0043005,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044458,GO:0044463,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060091,GO:0060271,GO:0060285,GO:0060294,GO:0070925,GO:0071840,GO:0097014,GO:0097458,GO:0097729,GO:0097730,GO:0097732,GO:0098862,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.cilium movement involved in cell motility
EggNOG OGs2C9RZ@1,2QR99@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_000910.1
Exons7
Model size865
Cds size849
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816505.2635763-UTR-L-elsbetiae_contig5013:998..10081622816505.2635763-UTR-L-elsbetiae_contig5013:998..1008Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5013 999..1008 +
1691683608.1857297-UTR-L-elsbetiae_contig5013:998..10081691683608.1857297-UTR-L-elsbetiae_contig5013:998..1008Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5013 999..1008 +
1622816505.3607726-UTR-L-elsbetiae_contig5013:5533..55391622816505.3607726-UTR-L-elsbetiae_contig5013:5533..5539Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5013 5534..5539 +
1691683608.282112-UTR-L-elsbetiae_contig5013:5533..55391691683608.282112-UTR-L-elsbetiae_contig5013:5533..5539Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5013 5534..5539 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816505.274525-CDS-L-elsbetiae_contig5013:1008..10891622816505.274525-CDS-L-elsbetiae_contig5013:1008..1089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 1009..1089 +
1691683608.2024674-CDS-L-elsbetiae_contig5013:1008..10891691683608.2024674-CDS-L-elsbetiae_contig5013:1008..1089Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 1009..1089 +
1622816505.2853894-CDS-L-elsbetiae_contig5013:1559..17061622816505.2853894-CDS-L-elsbetiae_contig5013:1559..1706Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 1560..1706 +
1691683608.2151349-CDS-L-elsbetiae_contig5013:1559..17061691683608.2151349-CDS-L-elsbetiae_contig5013:1559..1706Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 1560..1706 +
1622816505.2974713-CDS-L-elsbetiae_contig5013:2353..25211622816505.2974713-CDS-L-elsbetiae_contig5013:2353..2521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 2354..2521 +
1691683608.2274084-CDS-L-elsbetiae_contig5013:2353..25211691683608.2274084-CDS-L-elsbetiae_contig5013:2353..2521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 2354..2521 +
1622816505.315308-CDS-L-elsbetiae_contig5013:3098..32061622816505.315308-CDS-L-elsbetiae_contig5013:3098..3206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 3099..3206 +
1691683608.2364902-CDS-L-elsbetiae_contig5013:3098..32061691683608.2364902-CDS-L-elsbetiae_contig5013:3098..3206Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 3099..3206 +
1622816505.329289-CDS-L-elsbetiae_contig5013:3518..36231622816505.329289-CDS-L-elsbetiae_contig5013:3518..3623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 3519..3623 +
1691683608.2451253-CDS-L-elsbetiae_contig5013:3518..36231691683608.2451253-CDS-L-elsbetiae_contig5013:3518..3623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 3519..3623 +
1622816505.340114-CDS-L-elsbetiae_contig5013:4695..48601622816505.340114-CDS-L-elsbetiae_contig5013:4695..4860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 4696..4860 +
1691683608.2585216-CDS-L-elsbetiae_contig5013:4695..48601691683608.2585216-CDS-L-elsbetiae_contig5013:4695..4860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 4696..4860 +
1622816505.350307-CDS-L-elsbetiae_contig5013:5458..55331622816505.350307-CDS-L-elsbetiae_contig5013:5458..5533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 5459..5533 +
1691683608.2738745-CDS-L-elsbetiae_contig5013:5458..55331691683608.2738745-CDS-L-elsbetiae_contig5013:5458..5533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5013 5459..5533 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5013.13024.1prot_L-elsbetiae_contig5013.13024.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5013 1009..5533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5013.13024.1

>prot_L-elsbetiae_contig5013.13024.1 ID=prot_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp
MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVN
GNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEAL
AGAVVGRLRGDPSLPLDEEPEEEPPAGDDEEEEPRPPERFLEMHRLAHIV
KTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPE
SIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAW
PGYFFFHEAETSDYGGAYFGDGLPNTDLQFML*
back to top

mRNA from alignment at L-elsbetiae_contig5013:999..5539+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5013.13024.1 ID=mRNA_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4541bp|location=Sequence derived from alignment at L-elsbetiae_contig5013:999..5539+ (Laminarionema elsbetiae ELsaHSoW15)
ACAGAACAAAATGGTGGACATTTCCCGGCACATTGACTTCCTCGGGCCTT CTGGAAAGACGCTCAGCGTCTCGGAGAGATCTGGGCTGCAGGTGGGATGA GCTTGCTTGCTGGGTTCTTGCTGTTTGAGCAGCCGTTTTCAGAAGGCTGC TGGTTAAAGTTGACACATAGCGACTCAAGCAAGTGCGGGAGGGAAGGTTC TACGTAGAAGGCTACGTAGAACCTTGGAATCAGTCTATTTGTTGTTCGAC ACCTATACAAAAAGCGAAGCTTAACCATTGAATAAATAGAGCCGCGCGCT TCCCATTTGCCTCGACAACCATTGCCGTGCCAATTATGCCGGCGAAAATG TCCTGCTTCGTGACTCTGCTGTTGAAACATGGTGCACACATCTGGTGGAA AAACGAAATCCCCAAGTCCACGGATTGCTCCAAACCCCTTTCAACGCACC CTCAACCTTTACCGCTTTGGTCCCGCAGGTCGAAGAGAGTTAAAAAAAGG TGAAACCGACACCAATACCCCCATGTACATACAACGATCCGTGGCGCACG CATGCTGATAGGTGTCGATGATGCAGCGAGAGAGGGAGGAGCGCCTGGAA GGGAACATGATGTTCTGGGGTAAGGTCAACGGCAACGAGAACGACTACCT CGTCTGCTACGCCTTGTCGACCCCGACTCTCGAGGAGGGCGACTTCCCAC TCAAGAAGGTGATAAGAGATAACTCCGTGGATGTCAGCGAGAACAGGTCC AAACCAACCCGCCCCCATCCGTGCCGTGCGCGGCGTCCTGCGAAATACCA GCCAGTCAACTGTACGAAAAACCTGTTTCTTTACGGCAGTTCCCATCGTA CCGCAAGGCAAGCGTTCACAATATCACAGTATGGAAATGAATGGGCTGCT ATCACAGAGCTGGCCGCAAATATACACCCGTGTTGAGCGTACGCGAATAA GGTGGGTGCGGGATATTTCTCCCGCGCCCAACGAGCACGGGGGGCTTTTT CCCCTGGTCGAATCGCTCCAAGCAAGAAAACAAAAATAGACTCTTCAATA CAGGCCTCTGTTTTTGTGCGTGGTCCTCCGTGCACACGCGCCTCTACCTG CACGAACACGGGGCATGAGCACCAACCAGATGGCTGCCCGTCGCAAGACC AAGCTTATCGGTGGGGATCGAACAAAGAGCATACTTCTATAACTTCTACT TGAGAAAACCGATTCCCGTCCGTCTCCCATGTAGGGAGATTCCATCTTTG ATTTCTTCATCTCAAAAACTCGGCTTTTGTGCCCCCCCCCTCCCCCATCG GCGGTATACCGTGGGGTTTCTTCAAACCTCTCCCATCTTGCACGCGCGGC GGTAGTTTTACTTTTGCGTGAGCACCGACACGTCTCTGCGGCAGATGCCG GCCCTCAAGCCCGAGTACGAGGCGCTGGCCGGGGCCGTGGTCGGGAGGCT GAGGGGGGACCCTTCGCTTCCTCTTGACGAAGAGCCGGAGGAGGAGCCGC CGGCGGGGGACGATGAAGAAGAGGTACATACATATGTGCCGACGACCCCG AAGCTGCAGAGGACAACTTTGTCCGGCGGTGCTGGACGCTTGTTTCCGGC CCGGACTTGCGTTTCTTCGACAAGGCTCTGCATACGTGTAGCTTGACTGA CTGTGTGTACAAGCGGACCTGCCACCACGGCTTGGAAGGTGGCTGTGTTC GAAGAACCCTTCCGAGGCTTCCATACATAGCTCGTTCTCGCTCCTCTTCT CTCTCCCGCTCGACTACTTTGGGGTTCGGCGACCCTTACCGCATGCCTCG AGTCCACGACGATACCCCTTGTGCCGCCCCGTTCACCCCTGTTGCGCTGC ATGGCGTTTTATTTTGTCCAACGCTGGACCAATGAAACGTTTTGAGAGGA AAAGCAGTTAATCAAAAATGGAACCTGACCCACATCGACACGGGAATCCG TGAGATCCAGTCGGTATTCCATATAGTGACGTACGTAATATTGGGCCGGC CGAGTAGAAAAACACCTAAAACATACGAAGAATTAATCATCTCCCCTTCG AGTCTCTGCCACATGTCAAACAATATGCATAAACGTTTGTTTGCCGCCAG GAGCCCCGCCCTCCCGAACGGTTCCTGGAGATGCATCGTCTGGCGCACAT CGTGAAAACAATCGACAGGGCCGTGGCGGTAGTGCCGAAGGGGGCTTTTC TAGTCGAGGTATGTGTGTACACACATCGATCCGAGACAGGGAAGTACGTA GTGTTTTATCCTTGCGGGGACGAGTAAGCAGCGTGCGAAAACAGCCCCAT GAGTGTCTACAATCCTCGATGAACAGCATGGCGGTTTCAAACCCACCCCG GCGAGTCAGAAAAACGGCGGTGGTCACAGAACACCGCCCCCCCTCCGCTT GCGAGTACACTTTCCGATTAAATCTGTAGATCTATTGTTCGTACTTTGTT CTCTGCGCCACTGATATGTAGATCCATTGATCGTACTTTGTTCTCTGCGC CACTACTGCAATGGCCCCAGGCTTCCCGGAAGATCCGGCCTTACCGCAAC TTCGAGGGGCTGTCCGCCGAGGCCGCGAGGGATCTCCGTAGCTATTTCCA CTTCAGGAACCCCGAGAGCATCGAGGTGGGCGTAAACGACACGAGTCAAG GAGCATCAACATATTTTAACCCCCTCAGTGTCAGTAGCACAGCAGTGAAT AATACATCTTGATAGCATGTATTGGTACACCTTTAGGATAAGTGCCATTC ACGCCCTCTTATTAGTAAAATCAGCGCGCGTGCTCAGGCAGCAAAGTCTC CAGCATCAGCATCAGCTTCAGCTTCAGCATCAGCATCAGCAAAATAATGT AAAAAAAAACTCGGACACATATAGTAGAAATAATGATTTGCACACATTGT TTTCTTGCAGTATACTATGGATTCATCGTTTTTTTCTCGAGTCGAGCTGT CAGAGCCTCTACACGCGAGGAGTGTTGAGAGGCCCGGGGTAGAGCGAGCC TGAGGATGCACGAGCACTGTTTTCACTCTCTCCGTCGGCGAATCAGCATG CGAGCAAAATATTGACAAGTGCTGATCGAAACAGAGCGGTATGGGCTACG GACGGCGCCAGAGCGGCCGTTGGGGTTGCCTCTTTCGCCGCATGGTGGAG ATACTTCGATCTGTGCAAATCGAGAACCGGGCTGTGCTCTCGGCGACTAA TGTACCCCCGGCGACTAACTTGGGAGGAGCAGACTTAGAATGTACTCAAG CAGAATCTAAATCTTTGAAGGGAGTTAGTTCTACACGATCTATTCCGAGT CCTTGCGCGTGTCGGAAGAGAGTTGAGGGAAGCATATCTAGTCAGAAAAC AAACCCCACTGATGAGTGAACCACTGGTATACCATACTGGTACTGGTCCT CAATTTTCTCTGGGCGCAGCTTAGTCTACACATAAAAATTTCCACATATT GTAGCCCCGCCGAATGCTAGCATCTGACAACGAGAACGCCTGCGTTACCC TGTCGACATCGTGCGCAAACGTTCTCTTACCCCACATTATAAAGACCCAA TAAACGAATCGTTACAAACATTAACATTTCTCTCATCCCAGAAAAAGGAC CCAACAAACGGATCGTTATCTCATCTCACAGAATATGAGAAAAAAACGCA TCAAGCGCACCCCCCCCCCGCCCTCGCTCCCCTGCTCCTGCTCCCAGGCT ATTGCGGCGCTCACGAAGAAAGGGCTGGTGAGGGACGCCGATTTCCTCGA CCCGATCGCTGCAGACAAGCCAGCGGGATGCTGGACGATGTCCACGAACC CCTCCGCCTCGTGCTCGCTGCTTCGCAGTCTCGCGTGGCCGGGGTACTTC TTCTTTCACGAGGTACTGACTACTGTTGTGCTGTAAAAAAAGTGACCAAC ACAGGCGCGGCCAAGTGTTGGTGTACTTAGTCTATAGTCTATATATATGT GGTACAGTATAGATATGTATATCTAAAGATATAAAGTTGATGGGCTTTTC CTGTCGAGTAAAACCCGCCGCGATGGGTGCTTGCCTGCCCCTTGCCCCTT CCCCCCCAAAAAAAAAAAAACGAGTAAACGCAGGGTGGGGTAGGCGACGC TCCTTGAAAGCTTCCGCCCATGCTCTCGTTTTTCCGAGGAACCCTGGTTC GGGGCAGGAAGGGACGGATCACCTGGACGTGAAGTTCCGTTCGTTTCTCG CTTGGGTCGGGATGGACTAGATCTACTACATTAATTAAGTGCTTTTCAGC CACAGCACACCATGTCTATCTAGAGTACGAGAGCCCTTCGCACGTACACG TATGTATTTACATGTCTGTCTCGACCAAGTCCCAGTGGTAGGCGGCAAGC GTTGAATATCTAGACAACACTTCGTGTCCCTCGTGGTCGCAGAGATGTCC CTCACACTCTCACTACCCCCCCGCTCCGAAAAAAACGTCACTCCTCTGTT CGATATGCAGGCTGAAACAAGCGACTACGGGGGAGCGTACTTCGGAGATG GGTTACCCAACACCGACCTGCAATTTATGCTATGATCGATC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5013:999..5539+

>mRNA_L-elsbetiae_contig5013.13024.1 ID=mRNA_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig5013:999..5539+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGACATTTCCCGGCACATTGACTTCCTCGGGCCTTCTGGAAAGAC
GCTCAGCGTCTCGGAGAGATCTGGGCTGCAGATGGTGGACATTTCCCGGC
ACATTGACTTCCTCGGGCCTTCTGGAAAGACGCTCAGCGTCTCGGAGAGA
TCTGGGCTGCAGGTGTCGATGATGCAGCGAGAGAGGGAGGAGCGCCTGGA
AGGGAACATGATGTTCTGGGGTAAGGTCAACGGCAACGAGAACGACTACC
TCGTCTGCTACGCCTTGTCGACCCCGACTCTCGAGGAGGGCGACTTCCCA
CTCAAGAAGGTGTCGATGATGCAGCGAGAGAGGGAGGAGCGCCTGGAAGG
GAACATGATGTTCTGGGGTAAGGTCAACGGCAACGAGAACGACTACCTCG
TCTGCTACGCCTTGTCGACCCCGACTCTCGAGGAGGGCGACTTCCCACTC
AAGAAGTTTTACTTTTGCGTGAGCACCGACACGTCTCTGCGGCAGATGCC
GGCCCTCAAGCCCGAGTACGAGGCGCTGGCCGGGGCCGTGGTCGGGAGGC
TGAGGGGGGACCCTTCGCTTCCTCTTGACGAAGAGCCGGAGGAGGAGCCG
CCGGCGGGGGACGATGAAGAAGAGTTTTACTTTTGCGTGAGCACCGACAC
GTCTCTGCGGCAGATGCCGGCCCTCAAGCCCGAGTACGAGGCGCTGGCCG
GGGCCGTGGTCGGGAGGCTGAGGGGGGACCCTTCGCTTCCTCTTGACGAA
GAGCCGGAGGAGGAGCCGCCGGCGGGGGACGATGAAGAAGAGGAGCCCCG
CCCTCCCGAACGGTTCCTGGAGATGCATCGTCTGGCGCACATCGTGAAAA
CAATCGACAGGGCCGTGGCGGTAGTGCCGAAGGGGGCTTTTCTAGTCGAG
GAGCCCCGCCCTCCCGAACGGTTCCTGGAGATGCATCGTCTGGCGCACAT
CGTGAAAACAATCGACAGGGCCGTGGCGGTAGTGCCGAAGGGGGCTTTTC
TAGTCGAGGCTTCCCGGAAGATCCGGCCTTACCGCAACTTCGAGGGGCTG
TCCGCCGAGGCCGCGAGGGATCTCCGTAGCTATTTCCACTTCAGGAACCC
CGAGAGCATCGAGGCTTCCCGGAAGATCCGGCCTTACCGCAACTTCGAGG
GGCTGTCCGCCGAGGCCGCGAGGGATCTCCGTAGCTATTTCCACTTCAGG
AACCCCGAGAGCATCGAGGCTATTGCGGCGCTCACGAAGAAAGGGCTGGT
GAGGGACGCCGATTTCCTCGACCCGATCGCTGCAGACAAGCCAGCGGGAT
GCTGGACGATGTCCACGAACCCCTCCGCCTCGTGCTCGCTGCTTCGCAGT
CTCGCGTGGCCGGGGTACTTCTTCTTTCACGAGGCTATTGCGGCGCTCAC
GAAGAAAGGGCTGGTGAGGGACGCCGATTTCCTCGACCCGATCGCTGCAG
ACAAGCCAGCGGGATGCTGGACGATGTCCACGAACCCCTCCGCCTCGTGC
TCGCTGCTTCGCAGTCTCGCGTGGCCGGGGTACTTCTTCTTTCACGAGGC
TGAAACAAGCGACTACGGGGGAGCGTACTTCGGAGATGGGTTACCCAACA
CCGACCTGCAATTTATGCTATGAGCTGAAACAAGCGACTACGGGGGAGCG
TACTTCGGAGATGGGTTACCCAACACCGACCTGCAATTTATGCTATGA
back to top