mRNA_L-elsbetiae_contig5013.13024.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: D7G1G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G3_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 1.810e-180 Identity = 261/283 (92.23%), Postives = 270/283 (95.41%), Query Frame = 2 Query: 11 MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 MVDISRH+DFLGP GKTLSVSERSGLQVSMMQR+REERLEG M+FWGKV GNENDYLVCYAL+TPTLEEGDFPLKKFYFCVS+DTSLR MPA+KPEYE LA AV GRLRGDPSLPLDEEPEXXXXXXXXXXXX PRPPERFLEMHRLAHIVKTIDRAVAVVPKGA LVEASRKIRPYRNFEGLS EAA+DLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKP GCWT+S NPSASCS+LRSLAWPGYFFFHEAET DYGGAYFGDGLPNTDLQFML Sbjct: 1 MVDISRHVDFLGPCGKTLSVSERSGLQVSMMQRKREERLEGKMVFWGKVEGNENDYLVCYALATPTLEEGDFPLKKFYFCVSSDTSLRLMPAVKPEYEVLAAAVTGRLRGDPSLPLDEEPEXXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPYRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSASCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 283
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A6H5KZL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL4_9PHAE) HSP 1 Score: 337 bits (865), Expect = 7.480e-115 Identity = 171/194 (88.14%), Postives = 177/194 (91.24%), Query Frame = 2 Query: 278 MPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 MP++KPEYE LA AV GRLRGDPSLPLDEEPE XXXXX PRPPERFLEMHRLAHIVKTIDRAVAVVPKGA LVEASRKIRP+RNFEGLS EAA+DLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKP GCWT+S NPS SCS+LRSLAWPGYFFFHEAET DYGGAYFGDGLPNTDLQFML Sbjct: 1 MPSVKPEYEVLAAAVTGRLRGDPSLPLDEEPEEEEPLAGXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGALLVEASRKIRPHRNFEGLSVEAAKDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPPGCWTLSMNPSVSCSVLRSLAWPGYFFFHEAETGDYGGAYFGDGLPNTDLQFML 194
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A835YS21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS21_9STRA) HSP 1 Score: 318 bits (814), Expect = 8.880e-106 Identity = 159/284 (55.99%), Postives = 204/284 (71.83%), Query Frame = 2 Query: 11 MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVG--RLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 MVDI +H++FLGP+G +LS ER+GLQVSM+QR++EE L + FWGK+ +E DYL+CY+L P LEEG FP++++Y+ S DT LRQMP L E ++LA AV R +GDPSLPLD EPE PERF E+HRLA+ V ID VAV PKGA L+EASR++ P R FEGLS EAA ++R+YFH R PE+ A AALT+KGLV DADFLDP+A D+P G W+++ + + + + LRSLAWPGYFFF + + ++GG YFG GLPNTDL FML Sbjct: 1 MVDIMKHMEFLGPNGYSLSQGERAGLQVSMVQRQQEESLAMPLKFWGKLLADEADYLICYSLRAPELEEGIFPMRQYYYATSNDTLLRQMPTLSAEQKSLAAAVPKGQRFKGDPSLPLDAEPEEEEADDSEEPKAA--PERFRELHRLAYTVAQIDHDVAVTPKGAMLMEASRRVVPNRYFEGLSYEAAGNIRNYFHCRGPETPAAAAALTRKGLVSDADFLDPLAGDRPQGVWSLTRDTTNTMACLRSLAWPGYFFFTQIGSGEHGGVYFGTGLPNTDLAFML 282
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A7S2V1U7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U7_9STRA) HSP 1 Score: 283 bits (724), Expect = 2.940e-92 Identity = 144/271 (53.14%), Postives = 183/271 (67.53%), Query Frame = 2 Query: 50 SGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLD--EEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 SG TLS+ E+SGL ++++QR +EE + FWGK+ G E DYLV YAL + D P KKFY+C D +LRQ+P L EY +A ++ GR +GDPS+PLD EE E ERF E+HRL + V+ IDR VAVVP+GAFL+EAS KI RN+EGLS EAA DLR+YFHFR PES+ A+AAL + G+++ A+FLDPIA DKP G W+++ + S + LRS WPGYFFFH+ T +YGG YFGDGL N DL FML Sbjct: 13 SGCTLSLDEKSGLDIAVLQRRQEEIFSTKLYFWGKIMGEEEDYLVAYAL----VPSEDVPTKKFYYCTGKDYTLRQLPVLSEEYTTMAKSIKGRFKGDPSVPLDGGEEDEDEDPESGIQK------ERFREIHRLTYTVQMIDRDVAVVPRGAFLMEASHKISKNRNYEGLSYEAAGDLRNYFHFRRPESVHALAALKRPGIIKAAEFLDPIATDKPDGIWSLTYDASHTGVNLRSFYWPGYFFFHKIGTIEYGGVYFGDGLANEDLAFML 273
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A7S2H666_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H666_9STRA) HSP 1 Score: 247 bits (630), Expect = 7.120e-78 Identity = 133/281 (47.33%), Postives = 182/281 (64.77%), Query Frame = 2 Query: 41 LGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDT-SLRQMPALKPEYEALAGAV-VGRLRGDPSL-------PLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 LGP+G TLS+ ER+ LQ++M+ +R+E L G + FWGK+ G NDYL+ YA+ PT FP+KKFY+C +++ SL QMP+L E+E LA + RGDPS DEE E P E F E HRL + V+TID +V+P+GAF+V+A+ +R ++FEGLS +AA L +Y+HFR+P+SI A A L K G+VR ++FLDPI+ D+P G W++ + S + LLRS WPGYFF+H ETS+YGG YFGDG+ N D+ FML Sbjct: 9 LGPTGYTLSIEERAALQIAMLAVQRKENL-GRLQFWGKITGESNDYLIAYAIE-PTYS---FPIKKFYYCTASNGYSLVQMPSLTEEWEGLAKTWRMLPFRGDPSFCPGGNAEDKDEEAEPEFDDEGNPIEVPNK-EVFSEHHRLTYTVRTIDTDASVLPRGAFIVDAAHTVRKNKSFEGLSYDAAASLSNYYHFRDPKSICASANLNKPGIVRPSEFLDPISEDEPKGVWSLCRDASHTMVLLRSFYWPGYFFYHCIETSEYGGVYFGDGIANEDIAFML 283
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: F0YNP7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNP7_AURAN) HSP 1 Score: 229 bits (584), Expect = 5.380e-71 Identity = 127/283 (44.88%), Postives = 175/283 (61.84%), Query Frame = 2 Query: 32 IDFLGPSGKTLSVSERSGLQVSMMQREREERLE-GNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTS-LRQMPALKPEYEALAGAVVGR-LRGDPSLPL-----DEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 ++FL PSG LS+SER+GL ++M+Q + E L G++ FWG++ G +DYLV AL TP+ FP KKFY+ + + + QMP L EY A A +V + G+PS+P + E E PE F E H+LA+ V ID VVP+GA+LV+A+ ++ +EGL+ EAA LRSYFHFR P+S A AL K G+VR DFLDPIA D PAG +++ +PS + +++RS WPG +F+H+ T +YG Y GDGLPNTD+QFML Sbjct: 1 MEFLAPSGSGLSISERAGLDIAMLQVRQSENLPLGSLSFWGRIKGKNDDYLVAVAL-TPSYP---FPSKKFYYTTTAKSEKMSQMPDLSEEYAAHAATLVSKPFAGEPSMPYPIPPKEGEEEVVAEPVLDENGEEIQPEVFREEHKLAYHVALIDGDATVVPRGAYLVDAAHQVIKNPAYEGLAYEAAGQLRSYFHFRAPKSERAQKALEKPGVVRAGDFLDPIADDVPAGTFSLYYDPSNTMAIIRSFYWPGAYFYHQIGTGNYGSVYMGDGLPNTDIQFML 279
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A5A8CDT7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDT7_CAFRO) HSP 1 Score: 224 bits (572), Expect = 3.930e-69 Identity = 132/285 (46.32%), Postives = 178/285 (62.46%), Query Frame = 2 Query: 26 RHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPL---DEEPEXXXXXXXXXXXX---PRPPER--FLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 RH+D L SG TLSV ER+GL+ M +R+ EE L ++ FWG++ E DYLV Y P+ E +P K+FYFC + L+ P L E+ + G LRGDP L + DEE XXXXXXXXXXX PR P++ F+E HRLAH V +D +++VP+GAF++ + + P +F GLSA A SY HFR P + E + L ++G +RD DFLDP++ D+P+G W++ + +L+RSL WPGYFF H T +GGAYFG+GLPN DL FML Sbjct: 4 RHLDDLAVSGFTLSVEERAGLESGMRKRQLEEGL-ASIRFWGRITAAEADYLVAYGFP-PSAE---YPKKQFYFCTTKSFELQAFPDLTDEFSGKCDKLTGTLRGDPGLVVGGDDEEXXXXXXXXXXXXXEEGAPRRPKKVKFIEAHRLAHRVLAMDSDLSIVPRGAFVITPTHYLAPNPSFAGLSATEAASAASYLHFRRPVAEERRSVLDREGALRDVDFLDPVSEDEPSGVWSIRVDEGEGTALVRSLRWPGYFFVHRLGTQSFGGAYFGNGLPNRDLAFML 283
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A812K779_9DINO (Rsph9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K779_9DINO) HSP 1 Score: 227 bits (578), Expect = 1.140e-65 Identity = 132/274 (48.18%), Postives = 174/274 (63.50%), Query Frame = 2 Query: 50 SGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXX-----PRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 SG TLSV E +GL+V++ +R EE + ++ FWG++ G+E DYLV YA+ ++ FP K+F+ C + L+Q+P L E++A A A+ G+ +GDP+ EE XXXXXXXXXXXX P P +F E+HRLAH+V ID AVVP+GA+++ A+ F GL+A A +YFHFR E +EA AA +K GLV DFLD IA D P G W + + + LRSLAWPGYFF H TS++GGAYFGDG PN DL FML Sbjct: 437 SGNTLSVEEAAGLEVALAKRRLEEGVS-DVKFWGRITGSERDYLVAYAV----VDIEGFPHKRFFACSTGTFDLQQLPELSEEFKAQAAAIKGKFKGDPTNLYGEEEXXXXXXXXXXXXXGAEAKPPKPVKFSELHRLAHVVSCIDHDTAVVPRGAYILTATHATVRNATFGGLTATEAASPSNYFHFRAAEGLEAAAAASKDGLVASTDFLDSIATDSPKGTWVLRVDAGTGSATLRSLAWPGYFFSHTLGTSEFGGAYFGDGFPNEDLAFML 705
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A067CFY2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFY2_SAPPC) HSP 1 Score: 203 bits (517), Expect = 4.510e-61 Identity = 116/277 (41.88%), Postives = 160/277 (57.76%), Query Frame = 2 Query: 29 HIDFLGPS-GKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 H+D L G TL+ ERS L++ ++R+ E + G M WGK+ G DY+VC A +E D P KKFYFC +T L+Q P + E A A GRL+GDPS P+DE + + F E+ RL IV+ ID A ++VP GA++V A+ + R F+GL+ + A+ L SY+H+R +S E +AL++ GLVR ADFLDPI++D G W M + + + +LR L +PG FFH+ T YG AY GDGL N DL FML Sbjct: 5 HVDVLSRCLGYTLTSQERSNLEIGFLRRQATENVVG-MRLWGKILGEAQDYVVCVA----HVEALDVPKKKFYFCTNTSPELQQFPEVSKEKRDKAAAYTGRLKGDPSRPMDESDDGQDDTNK---------DIFREVDRLVVIVEAIDDAASIVPCGAYVVSATHHVVANRLFQGLTWDRAQQLSSYYHYRPADSAERKSALSQPGLVRAADFLDPISSDLD-GVWDMRKDNTGAAIVLRHLQYPGAIFFHKPRTGVYGFAYVGDGLRNPDLAFML 266
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Match: A0A1V9YG94_9STRA (Radial spoke protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG94_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.270e-60 Identity = 118/277 (42.60%), Postives = 159/277 (57.40%), Query Frame = 2 Query: 29 HIDFLGPS-GKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNGNENDYLVCYALSTPTLEEGDFPLKKFYFCVSTDTSLRQMPALKPEYEALAGAVVGRLRGDPSLPLDEEPEXXXXXXXXXXXXPRPPERFLEMHRLAHIVKTIDRAVAVVPKGAFLVEASRKIRPYRNFEGLSAEAARDLRSYFHFRNPESIEAIAALTKKGLVRDADFLDPIAADKPAGCWTMSTNPSASCSLLRSLAWPGYFFFHEAETSDYGGAYFGDGLPNTDLQFML 856 H+D + S G TL+ ERS L+VS +R E + +M FWGK+ G+ DY+VC A +E D P KKFYFC +T L+Q P + E +A GRL+GDPS P+DE + + F E+ RL IV+ ID A ++VP GA++V A+ +I R F+GLS + A L SY+HFR ES+E L + GL+R ADFLDPI D G W + + + + +LR+L +PG FH+ T YG AYFGDGL N DL FML Sbjct: 5 HLDIVSRSIGCTLTSQERSNLEVSFTRRYATEGIV-SMRFWGKIVGDAQDYVVCVAF----IEALDAPKKKFYFCTNTSPELQQFPEVGKEKRDMAIKYTGRLKGDPSRPMDENEDPQDDNNK---------DIFREVDRLVLIVEAIDAAASIVPCGAYVVSATHQIVANRLFQGLSWDRALQLGSYYHFRPAESVERKGVLAQPGLIRPADFLDPITIDLD-GVWDLRQDNTGAAVVLRNLQYPGSVGFHKPRTGAYGFAYFGDGLKNPDLAFML 266 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5013.13024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5013.13024.1 >prot_L-elsbetiae_contig5013.13024.1 ID=prot_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp MVDISRHIDFLGPSGKTLSVSERSGLQVSMMQREREERLEGNMMFWGKVNback to top mRNA from alignment at L-elsbetiae_contig5013:999..5539+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5013.13024.1 ID=mRNA_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4541bp|location=Sequence derived from alignment at L-elsbetiae_contig5013:999..5539+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5013:999..5539+ >mRNA_L-elsbetiae_contig5013.13024.1 ID=mRNA_L-elsbetiae_contig5013.13024.1|Name=mRNA_L-elsbetiae_contig5013.13024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig5013:999..5539+ (Laminarionema elsbetiae ELsaHSoW15)back to top |