prot_L-elsbetiae_contig4964.12940.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4964.12940.1
Unique Nameprot_L-elsbetiae_contig4964.12940.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length533
Homology
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 9.170e-192
Identity = 391/533 (73.36%), Postives = 429/533 (80.49%), Query Frame = 0
Query:   19 VESAADEPQPAGRPVSDEPQQEELYFLIANFLTNASPCSRTAAVLQQELRERNLLGVAYDWESNARPASFDDVRRRHQALPANQLARVTAQYLRQQQLAGSATGSSSGTAIVVAEHPRS------------------LSGPGAARSLLSRVEPFGHDREANEKARAACAIRVIEACVQTGQVQADSRKVSGDLATVRLKLRALELEXXXXXXARANELAVGSYTRGRSKAALVPGQESQAELTRLALDRQLEELLALEAVLPEKAMLAQDEKDAAVAEARERGALRNPLTRYAGKAVPTVLSNRRAGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDQDSIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAAGCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR 533
             E AA  P+ AG PVS+E    ELYFLIANFLTNAS CSR AA L+QELRE+NLLG AY+WE +ARPASFDDV+RRHQALPA+QLARVTAQYLRQQ                                         L+GPG +RSLLSRVEPF  DREANE+AR  CA RV+EAC+++ +V+A +RKV  DLATV+ KL ALEL+      ARA   A GS TRGR +AALVPGQESQAELTRLAL RQ EELLA E VLPE+  LA+DEKDAA+AEAR+RGA+ N LTRYAGKAVPT+LSNRRAGG RFG  R AGR PL G SSRLLDDRMRPL+TANGHGV+PVFC+KFDRTGQYIFTGADD LVKVW+ +SGRL+LCLRGH  VITDMD+SPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR QDS+ +EDVVPIVLPHTNE+G MI VMCLSVSPAGNLIAAGCSDGAVRVWAYGD+DDDAAWGTGKHNTRR GR
Sbjct:   17 AEPAAATPELAG-PVSEE--SAELYFLIANFLTNASQCSRAAAALRQELREKNLLGTAYNWEGHARPASFDDVQRRHQALPADQLARVTAQYLRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGPGVSRSLLSRVEPFSEDREANERARTRCATRVVEACIESVRVRASARKVYSDLATVKSKLEALELDAASE--ARAIASAAGSATRGRCRAALVPGQESQAELTRLALRRQREELLAREVVLPEEVTLAEDEKDAALAEARQRGAMHNSLTRYAGKAVPTILSNRRAGGARFGGGRIAGRVPLRGASSRLLDDRMRPLITANGHGVHPVFCIKFDRTGQYIFTGADDALVKVWSVTSGRLMLCLRGHASVITDMDVSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGQDSLATEDVVPIVLPHTNEQGGMIPVMCLSVSPAGNLIAAGCSDGAVRVWAYGDSDDDAAWGTGKHNTRRTGR 544          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.490e-73
Identity = 199/253 (78.66%), Postives = 210/253 (83.00%), Query Frame = 0
Query:  306 AGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDQD-------------------------SIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAAGCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR 533
            AGG RFG  R AGR PL G SSRLLDDRMRPL+TANGHGV+PVFC+KFDRTGQYIFTGADD LVKVW+ +SGRL+LCLRGH  VITDMD+SPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR Q                          S+ +EDVVPIVLPHTNE+G MI VMCLSVSPAGNLIAAGC DGAVRVWAYGD+DDDAAWG GKHNTRRAGR
Sbjct:    2 AGGTRFGGGRIAGRVPLRGASSRLLDDRMRPLITANGHGVHPVFCIKFDRTGQYIFTGADDALVKVWSVTSGRLMLCLRGHASVITDMDVSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGQGRWGRARLGRGPCFIVLFLLASGSHGSLATEDVVPIVLPHTNEQGGMIPVMCLSVSPAGNLIAAGCIDGAVRVWAYGDSDDDAAWGIGKHNTRRAGR 254          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A4D9DDC7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDC7_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 6.470e-16
Identity = 118/200 (59.00%), Postives = 143/200 (71.50%), Query Frame = 0
Query:  326 SSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-------RDQDSI---VSEDVVP--IVLPHTNERGAM---IQVMCLSVSPAGNLIAAGCSDGAVRVW 510
            +SRLL  +     T NGH   PV+C+K+D+ GQY+ TGADD LVK+W+A SG L+  LRGH+GVITD+ +S DN++L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L       +++ S    V+ D +P  +VL HT+  G      +V CLSV P G  +A G  DG  R+W
Sbjct:  465 ASRLLHQK-----TVNGHMFCPVYCLKYDKHGQYVVTGADDQLVKLWSARSGSLMRSLRGHSGVITDLCVSSDNALLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGTLKYTFQEKASPLPPVASDALPSPVVLDHTSAGGGTEERARVKCLSVCPLGGFLATGAEDGVGRIW 659          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A024U5Z5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5Z5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.180e-13
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0
Query:  314 SRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 401
            +R+    PL       L  R R L + +GH   PVFCV +D++G YI TG+DD LVK+W+A +G L+  L GH G ITDMD+ P N +
Sbjct:  277 ARSTSLVPLQSTPPTFLYSRYRKLKSLSGHLQLPVFCVTYDKSGNYIITGSDDRLVKIWSAHTGELLYTLHGHVGNITDMDIHPSNGL 364          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A7M7JQR4_VARDE (Uncharacterized protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7JQR4_VARDE)

HSP 1 Score: 83.6 bits (205), Expect = 5.260e-13
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 402
            GH +  V+CV FD TG+YIFTGADD LVK+W+A+ GRL   LRGH   ITD+ LSPDNS+L
Sbjct:  177 GH-LQAVYCVLFDHTGRYIFTGADDHLVKIWSATDGRLRATLRGHQSEITDLSLSPDNSLL 236          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A293MMF7_ORNER (WD-repeat protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MMF7_ORNER)

HSP 1 Score: 79.7 bits (195), Expect = 6.240e-13
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 402
            GH ++ V+C  FDR+G YIFTGADD+LVK+W+A+ GRL+  LRGH+   TD+ +SPDN +L
Sbjct:  207 GH-LSSVYCCLFDRSGHYIFTGADDLLVKIWSATDGRLLATLRGHSAESTDLAVSPDNGLL 266          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: B7Q8Z4_IXOSC (WD-repeat protein, putative (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q8Z4_IXOSC)

HSP 1 Score: 82.4 bits (202), Expect = 1.120e-12
Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 401
            GH ++ V+CV FDR+G YIFTGADD+LVK+W+A  GRL++ LRGH+  ITD+ +SPDN +
Sbjct:  167 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 225          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A131XWC1_IXORI (Uncharacterized protein (Fragment) n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XWC1_IXORI)

HSP 1 Score: 82.4 bits (202), Expect = 1.170e-12
Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 401
            GH ++ V+CV FDR+G YIFTGADD+LVK+W+A  GRL++ LRGH+  ITD+ +SPDN +
Sbjct:  166 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 224          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A4D5RUL1_IXOSC (Putative bromodomain and wd repeat domain protein (Fragment) n=4 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RUL1_IXOSC)

HSP 1 Score: 82.4 bits (202), Expect = 1.210e-12
Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 401
            GH ++ V+CV FDR+G YIFTGADD+LVK+W+A  GRL++ LRGH+  ITD+ +SPDN +
Sbjct:  182 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 240          
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A1V9XL99_9ACAR (Bromodomain and WD repeat-containing protein 3-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XL99_9ACAR)

HSP 1 Score: 81.6 bits (200), Expect = 1.920e-12
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 0
Query:  342 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 402
            GH +  V+CV +D TG+YIFTGADD LVK+W+A+ GRL   LRGH   ITD+ LSPDNS+L
Sbjct:  177 GH-LQAVYCVLYDHTGRYIFTGADDHLVKIWSATDGRLRATLRGHASEITDLSLSPDNSLL 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEP1_ECTSI9.170e-19273.36WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5KTA2_9PHAE3.490e-7378.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DDC7_9STRA6.470e-1659.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A024U5Z5_9STRA2.180e-1345.45Uncharacterized protein n=4 Tax=Aphanomyces invada... [more]
A0A7M7JQR4_VARDE5.260e-1363.93Uncharacterized protein n=4 Tax=Varroa TaxID=62624... [more]
A0A293MMF7_ORNER6.240e-1357.38WD-repeat protein (Fragment) n=1 Tax=Ornithodoros ... [more]
B7Q8Z4_IXOSC1.120e-1260.00WD-repeat protein, putative (Fragment) n=1 Tax=Ixo... [more]
A0A131XWC1_IXORI1.170e-1260.00Uncharacterized protein (Fragment) n=2 Tax=Ixodes ... [more]
A0A4D5RUL1_IXOSC1.210e-1260.00Putative bromodomain and wd repeat domain protein ... [more]
A0A1V9XL99_9ACAR1.920e-1262.30Bromodomain and WD repeat-containing protein 3-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availablePANTHERPTHR16266WD REPEAT DOMAIN 9coord: 41..512
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 444..458
score: 37.58
coord: 498..512
score: 28.57
coord: 402..416
score: 38.95
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 418..457
e-value: 8.0E-7
score: 38.7
coord: 376..415
e-value: 6.1E-11
score: 52.3
coord: 467..511
e-value: 0.0035
score: 26.6
coord: 333..373
e-value: 7.8E-4
score: 28.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 378..415
e-value: 9.5E-9
score: 35.8
coord: 421..457
e-value: 9.4E-5
score: 23.1
coord: 486..510
e-value: 5.3E-4
score: 20.7
coord: 339..372
e-value: 6.7E-5
score: 23.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 479..510
score: 9.907
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 425..466
score: 14.853
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 383..424
score: 17.426
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 348..382
score: 9.606
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 323..529
e-value: 2.2E-46
score: 160.1
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 444..458
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 341..520
score: 36.174
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 345..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4964contigL-elsbetiae_contig4964:2962..9804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4964.12940.1mRNA_L-elsbetiae_contig4964.12940.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4964 2934..9804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4964.12940.1 ID=prot_L-elsbetiae_contig4964.12940.1|Name=mRNA_L-elsbetiae_contig4964.12940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=533bp
MDNPSIPGPGGVSRQSPPVESAADEPQPAGRPVSDEPQQEELYFLIANFL
TNASPCSRTAAVLQQELRERNLLGVAYDWESNARPASFDDVRRRHQALPA
NQLARVTAQYLRQQQLAGSATGSSSGTAIVVAEHPRSLSGPGAARSLLSR
VEPFGHDREANEKARAACAIRVIEACVQTGQVQADSRKVSGDLATVRLKL
RALELEEQEEEEARANELAVGSYTRGRSKAALVPGQESQAELTRLALDRQ
LEELLALEAVLPEKAMLAQDEKDAAVAEARERGALRNPLTRYAGKAVPTV
LSNRRAGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFC
VKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNS
MLVTSSEDRTVRVWDPRTGATLAVLRGHVSAVNLVRFAPGDSVAMSASED
GTCRVWDLRDQDSIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAA
GCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf