|
Homology
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI) HSP 1 Score: 596 bits (1536), Expect = 1.280e-191 Identity = 391/533 (73.36%), Postives = 429/533 (80.49%), Query Frame = 2
Query: 83 VESAADEPQPAGRPVSDEPQQEELYFLIANFLTNASPCSRTAAVLQQELRERNLLGVAYDWESNARPASFDDVRRRHQALPANQLARVTAQYLRQQQLAGSATGSSSGTAIVVAEHPRS------------------LSGPGAARSLLSRVEPFGHDREANEKARAACAIRVIEACVQTGQVQADSRKVSGDLATVRLKLRALELEXXXXXXARANELAVGSYTRGRSKAALVPGQESQAELTRLALDRQLEELLALEAVLPEKAMLAQDEKDAAVAEARERGALRNPLTRYAGKAVPTVLSNRRAGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDQDSIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAAGCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR 1627
E AA P+ AG PVS+E ELYFLIANFLTNAS CSR AA L+QELRE+NLLG AY+WE +ARPASFDDV+RRHQALPA+QLARVTAQYLRQQ L+GPG +RSLLSRVEPF DREANE+AR CA RV+EAC+++ +V+A +RKV DLATV+ KL ALEL+ ARA A GS TRGR +AALVPGQESQAELTRLAL RQ EELLA E VLPE+ LA+DEKDAA+AEAR+RGA+ N LTRYAGKAVPT+LSNRRAGG RFG R AGR PL G SSRLLDDRMRPL+TANGHGV+PVFC+KFDRTGQYIFTGADD LVKVW+ +SGRL+LCLRGH VITDMD+SPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR QDS+ +EDVVPIVLPHTNE+G MI VMCLSVSPAGNLIAAGCSDGAVRVWAYGD+DDDAAWGTGKHNTRR GR
Sbjct: 17 AEPAAATPELAG-PVSEE--SAELYFLIANFLTNASQCSRAAAALRQELREKNLLGTAYNWEGHARPASFDDVQRRHQALPADQLARVTAQYLRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGPGVSRSLLSRVEPFSEDREANERARTRCATRVVEACIESVRVRASARKVYSDLATVKSKLEALELDAASE--ARAIASAAGSATRGRCRAALVPGQESQAELTRLALRRQREELLAREVVLPEEVTLAEDEKDAALAEARQRGAMHNSLTRYAGKAVPTILSNRRAGGARFGGGRIAGRVPLRGASSRLLDDRMRPLITANGHGVHPVFCIKFDRTGQYIFTGADDALVKVWSVTSGRLMLCLRGHASVITDMDVSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGQDSLATEDVVPIVLPHTNEQGGMIPVMCLSVSPAGNLIAAGCSDGAVRVWAYGDSDDDAAWGTGKHNTRRTGR 544
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 264 bits (674), Expect = 4.480e-73 Identity = 199/253 (78.66%), Postives = 210/253 (83.00%), Query Frame = 2
Query: 944 AGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDQD-------------------------SIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAAGCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR 1627
AGG RFG R AGR PL G SSRLLDDRMRPL+TANGHGV+PVFC+KFDRTGQYIFTGADD LVKVW+ +SGRL+LCLRGH VITDMD+SPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR Q S+ +EDVVPIVLPHTNE+G MI VMCLSVSPAGNLIAAGC DGAVRVWAYGD+DDDAAWG GKHNTRRAGR
Sbjct: 2 AGGTRFGGGRIAGRVPLRGASSRLLDDRMRPLITANGHGVHPVFCIKFDRTGQYIFTGADDALVKVWSVTSGRLMLCLRGHASVITDMDVSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGQGRWGRARLGRGPCFIVLFLLASGSHGSLATEDVVPIVLPHTNEQGGMIPVMCLSVSPAGNLIAAGCIDGAVRVWAYGDSDDDAAWGIGKHNTRRAGR 254
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A4D9DDC7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDC7_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.880e-16 Identity = 118/200 (59.00%), Postives = 143/200 (71.50%), Query Frame = 2
Query: 1004 SSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSMLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-------RDQDSI---VSEDVVP--IVLPHTNERGAM---IQVMCLSVSPAGNLIAAGCSDGAVRVW 1558
+SRLL + T NGH PV+C+K+D+ GQY+ TGADD LVK+W+A SG L+ LRGH+GVITD+ +S DN++L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L +++ S V+ D +P +VL HT+ G +V CLSV P G +A G DG R+W
Sbjct: 465 ASRLLHQK-----TVNGHMFCPVYCLKYDKHGQYVVTGADDQLVKLWSARSGSLMRSLRGHSGVITDLCVSSDNALLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGTLKYTFQEKASPLPPVASDALPSPVVLDHTSAGGGTEERARVKCLSVCPLGGFLATGAEDGVGRIW 659
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A024U5Z5_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5Z5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.290e-13 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 2
Query: 968 SRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 1231
+R+ PL L R R L + +GH PVFCV +D++G YI TG+DD LVK+W+A +G L+ L GH G ITDMD+ P N +
Sbjct: 277 ARSTSLVPLQSTPPTFLYSRYRKLKSLSGHLQLPVFCVTYDKSGNYIITGSDDRLVKIWSAHTGELLYTLHGHVGNITDMDIHPSNGL 364
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A7M7JQR4_VARDE (Uncharacterized protein n=4 Tax=Varroa TaxID=62624 RepID=A0A7M7JQR4_VARDE) HSP 1 Score: 83.6 bits (205), Expect = 5.520e-13 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 1234
GH + V+CV FD TG+YIFTGADD LVK+W+A+ GRL LRGH ITD+ LSPDNS+L
Sbjct: 177 GH-LQAVYCVLFDHTGRYIFTGADDHLVKIWSATDGRLRATLRGHQSEITDLSLSPDNSLL 236
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A293MMF7_ORNER (WD-repeat protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MMF7_ORNER) HSP 1 Score: 79.7 bits (195), Expect = 6.410e-13 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 1234
GH ++ V+C FDR+G YIFTGADD+LVK+W+A+ GRL+ LRGH+ TD+ +SPDN +L
Sbjct: 207 GH-LSSVYCCLFDRSGHYIFTGADDLLVKIWSATDGRLLATLRGHSAESTDLAVSPDNGLL 266
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: B7Q8Z4_IXOSC (WD-repeat protein, putative (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7Q8Z4_IXOSC) HSP 1 Score: 82.4 bits (202), Expect = 1.180e-12 Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 1231
GH ++ V+CV FDR+G YIFTGADD+LVK+W+A GRL++ LRGH+ ITD+ +SPDN +
Sbjct: 167 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 225
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A131XWC1_IXORI (Uncharacterized protein (Fragment) n=2 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XWC1_IXORI) HSP 1 Score: 82.4 bits (202), Expect = 1.230e-12 Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 1231
GH ++ V+CV FDR+G YIFTGADD+LVK+W+A GRL++ LRGH+ ITD+ +SPDN +
Sbjct: 166 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 224
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A4D5RUL1_IXOSC (Putative bromodomain and wd repeat domain protein (Fragment) n=4 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5RUL1_IXOSC) HSP 1 Score: 82.4 bits (202), Expect = 1.270e-12 Identity = 36/60 (60.00%), Postives = 49/60 (81.67%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSM 1231
GH ++ V+CV FDR+G YIFTGADD+LVK+W+A GRL++ LRGH+ ITD+ +SPDN +
Sbjct: 182 GH-LSSVYCVLFDRSGHYIFTGADDLLVKIWSACDGRLLVTLRGHSAEITDLAVSPDNGL 240
BLAST of mRNA_L-elsbetiae_contig4964.12940.1 vs. uniprot
Match: A0A1V9XL99_9ACAR (Bromodomain and WD repeat-containing protein 3-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XL99_9ACAR) HSP 1 Score: 81.6 bits (200), Expect = 2.010e-12 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 2
Query: 1052 GHGVNPVFCVKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNSML 1234
GH + V+CV +D TG+YIFTGADD LVK+W+A+ GRL LRGH ITD+ LSPDNS+L
Sbjct: 177 GH-LQAVYCVLYDHTGRYIFTGADDHLVKIWSATDGRLRATLRGHASEITDLSLSPDNSLL 236
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 605.1 |
Seed ortholog evalue | 3.1e-170 |
Seed eggNOG ortholog | 2880.D8LEP1 |
KEGG ko | ko:K02606,ko:K11797,ko:K11798 |
KEGG Pathway | ko04110,ko04111,ko04113,map04110,map04111,map04113 |
KEGG Module | M00284 |
Hectar predicted targeting category | other localisation |
GOs | GO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006357,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008150,GO:0008284,GO:0008286,GO:0008360,GO:0009719,GO:0009725,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010799,GO:0010800,GO:0010941,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032868,GO:0032869,GO:0032870,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033365,GO:0034097,GO:0034504,GO:0034613,GO:0038111,GO:0040008,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042393,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043567,GO:0043568,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045840,GO:0045893,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0060255,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0070577,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0090068,GO:0098760,GO:0098761,GO:0140030,GO:0140033,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237 |
EggNOG free text desc. | regulation of cell shape |
EggNOG OGs | COG2319@1,COG5141@1,KOG0644@2759,KOG0955@2759 |
Ec32 ortholog description | WD40/YVTN repeat-like-containing domain |
Ec32 ortholog | Ec-26_000610.2 |
COG Functional cat. | L |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko03032,ko04121 |
Exons | 7 |
Model size | 1627 |
Cds size | 1599 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816496.450075-UTR-L-elsbetiae_contig4964:2933..2961 | 1622816496.450075-UTR-L-elsbetiae_contig4964:2933..2961 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4964 2934..2961 + |
1691683601.8333468-UTR-L-elsbetiae_contig4964:2933..2961 | 1691683601.8333468-UTR-L-elsbetiae_contig4964:2933..2961 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4964 2934..2961 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816496.4620538-CDS-L-elsbetiae_contig4964:2961..3162 | 1622816496.4620538-CDS-L-elsbetiae_contig4964:2961..3162 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 2962..3162 + |
1691683601.8486207-CDS-L-elsbetiae_contig4964:2961..3162 | 1691683601.8486207-CDS-L-elsbetiae_contig4964:2961..3162 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 2962..3162 + |
1622816496.4736102-CDS-L-elsbetiae_contig4964:3331..3616 | 1622816496.4736102-CDS-L-elsbetiae_contig4964:3331..3616 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 3332..3616 + |
1691683601.8618836-CDS-L-elsbetiae_contig4964:3331..3616 | 1691683601.8618836-CDS-L-elsbetiae_contig4964:3331..3616 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 3332..3616 + |
1622816496.4862049-CDS-L-elsbetiae_contig4964:4564..4809 | 1622816496.4862049-CDS-L-elsbetiae_contig4964:4564..4809 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 4565..4809 + |
1691683601.8753805-CDS-L-elsbetiae_contig4964:4564..4809 | 1691683601.8753805-CDS-L-elsbetiae_contig4964:4564..4809 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 4565..4809 + |
1622816496.5024476-CDS-L-elsbetiae_contig4964:6065..6219 | 1622816496.5024476-CDS-L-elsbetiae_contig4964:6065..6219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 6066..6219 + |
1691683601.885638-CDS-L-elsbetiae_contig4964:6065..6219 | 1691683601.885638-CDS-L-elsbetiae_contig4964:6065..6219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 6066..6219 + |
1622816496.5143273-CDS-L-elsbetiae_contig4964:7292..7517 | 1622816496.5143273-CDS-L-elsbetiae_contig4964:7292..7517 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 7293..7517 + |
1691683601.8964584-CDS-L-elsbetiae_contig4964:7292..7517 | 1691683601.8964584-CDS-L-elsbetiae_contig4964:7292..7517 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 7293..7517 + |
1622816496.5269463-CDS-L-elsbetiae_contig4964:8646..8924 | 1622816496.5269463-CDS-L-elsbetiae_contig4964:8646..8924 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 8647..8924 + |
1691683601.9073896-CDS-L-elsbetiae_contig4964:8646..8924 | 1691683601.9073896-CDS-L-elsbetiae_contig4964:8646..8924 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 8647..8924 + |
1622816496.5365965-CDS-L-elsbetiae_contig4964:9593..9804 | 1622816496.5365965-CDS-L-elsbetiae_contig4964:9593..9804 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 9594..9804 + |
1691683601.9195857-CDS-L-elsbetiae_contig4964:9593..9804 | 1691683601.9195857-CDS-L-elsbetiae_contig4964:9593..9804 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4964 9594..9804 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4964.12940.1 >prot_L-elsbetiae_contig4964.12940.1 ID=prot_L-elsbetiae_contig4964.12940.1|Name=mRNA_L-elsbetiae_contig4964.12940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=533bp
MDNPSIPGPGGVSRQSPPVESAADEPQPAGRPVSDEPQQEELYFLIANFL TNASPCSRTAAVLQQELRERNLLGVAYDWESNARPASFDDVRRRHQALPA NQLARVTAQYLRQQQLAGSATGSSSGTAIVVAEHPRSLSGPGAARSLLSR VEPFGHDREANEKARAACAIRVIEACVQTGQVQADSRKVSGDLATVRLKL RALELEEQEEEEARANELAVGSYTRGRSKAALVPGQESQAELTRLALDRQ LEELLALEAVLPEKAMLAQDEKDAAVAEARERGALRNPLTRYAGKAVPTV LSNRRAGGGRFGCSRAAGRAPLAGMSSRLLDDRMRPLVTANGHGVNPVFC VKFDRTGQYIFTGADDMLVKVWAASSGRLVLCLRGHNGVITDMDLSPDNS MLVTSSEDRTVRVWDPRTGATLAVLRGHVSAVNLVRFAPGDSVAMSASED GTCRVWDLRDQDSIVSEDVVPIVLPHTNERGAMIQVMCLSVSPAGNLIAA GCSDGAVRVWAYGDADDDAAWGTGKHNTRRAGR back to topmRNA from alignment at L-elsbetiae_contig4964:2934..9804+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig4964.12940.1 ID=mRNA_L-elsbetiae_contig4964.12940.1|Name=mRNA_L-elsbetiae_contig4964.12940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6871bp|location=Sequence derived from alignment at L-elsbetiae_contig4964:2934..9804+ (Laminarionema elsbetiae ELsaHSoW15) CTCACCTCTCCGTACGTGTCTCTGCGGCATGGACAATCCATCCATTCCTG
GCCCTGGCGGTGTATCACGCCAATCCCCCCCGGTAGAATCAGCAGCAGAT
GAGCCTCAGCCGGCCGGAAGACCTGTTTCGGACGAGCCTCAGCAGGAGGA
GCTCTACTTTTTAATCGCCAATTTCCTCACGAATGCCTCTCCCTGCTCTC
GTACGGCGGCGGTACTGCAGCAAGAGCTGGTATGTGATATGGGATAATGC
TCGAGATGAGTTTCCAAGGAATACTACCTCGCGGACACTTGCATTCGTTC
CCTCTGACAAAGAGTTTTTTCAAACCTCAAGCGTCTCAGCTAACGCGCGT
TATTACTGGGTTTCGCCGCGCTCTTTTCTCCTCTCGTCCTCCCTCAAGCG
CGAGAGAAACCTCCTCGGGGTTGCCTACGACTGGGAGAGCAATGCCCGGC
CAGCAAGCTTCGACGACGTTCGGCGTCGGCACCAGGCGTTGCCCGCAAAC
CAACTGGCTCGCGTTACGGCTCAGTACCTGCGACAACAGCAACTAGCAGG
CTCTGCCACGGGGAGCAGCAGTGGTACGGCTATCGTGGTGGCGGAACACC
CTCGTTCTTTGTCCGGGCCTGGCGCGGCGAGGTCGCTTCTGTCGAGGGTG
GAGCCCTTTGGCCACGACCGAGAGGCGAACGAGGTGTGTGTGTCGGCATA
TGTGCTACACATATTTTTGTTTTTGCAAACAGCGTACTCCTACACATAGA
TTTTCTGTGTACGAAGTACCAGTAGTAGGCAGTCTACATACTTATATAAA
TGTACGGCAGTAAATTTGAAACCTATCTACCGGTATGCAGCTACAAACCA
ATTGCGGGGGAAGCATGCACCGAAGGATATCTACCCCCACGCTAAGGATT
TGGGATGTGTACTGTCTATTCCCACACTTGAGTTTTTTTTCTCAGTTAGC
GTCGACCCCGGCAACCGTTTTACGAATAAATACATGACAAGGACGTCAAG
AGGGTCAAAACGCCAAGCCGCTTTTCCTAAGCGTCGGGACCCCCGTTGCG
CGACAACTGCTGTCGAAAAAAAAAAAAAAATGGCGTGCCTCAGAGAGGTA
GCTTGGTTGTGTCTACCTTGGAGTGGGTGGGCAAGTGGTGCGAGAAAAAT
GCCGATAAGTTGTCCTACATATTCGCGTCCATAAACGATAGGCGGCTTGA
TATTTTTATGCCTCCCTCGACACAAGGTGGACGACCCATTTATGTATGTA
GACGCGCGTTTTTGCCCCGGCGTCTCGGGTGTGCACGTATGTATGTAGCG
TAGCCCTCCAGACCCACGACCTCGTCGCCACGCACACGCGTGTATGTACG
CGACCAAACGTCCTCGGAAGTGGACGATTACACACGGGGACGGTGCGATT
ATGCAGGAGGCGGGGTTACTCCACTCTTGCTAGGCGATATGTAGGGGTGT
ACCGAGAGATCCCCAATTCTGAACACTTACACCCCTACACATGTAGACCA
TTGAAACACAGGGCGTCAAAACCCACCCCGAAAACCAGCGCAGCGCGGCA
GAGTTTTGCGCTTTCGCGCCAGCCTCTCACGCATGCTTCAACCCCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCCCCCAGAAAGCCCGCGCAGCTTGCG
CCATCCGCGTGATCGAGGCGTGCGTGCAGACGGGGCAGGTGCAGGCCGAC
TCCAGGAAGGTTTCCGGCGACCTGGCCACCGTCCGCCTGAAGCTCCGCGC
GCTCGAGCTCGAGGAGCAGGAGGAGGAGGAGGCCCGCGCCAACGAGCTGG
CCGTCGGGTCGTACACGCGCGGGCGAAGCAAGGCGGCGTTGGTGCCGGGG
CAGGAGAGCCAGGCGGAGCTCACAAGGTATGTATGTATGTATGTATGTAT
GTACGCACCTTTTGAGTGCAAACACACCATGTGAAGAAGCAGTGCGTTCG
TCTGCGTGATATATTTGTCGGCTTGAGAAGTTTTTGGCCCACCGCTCCTC
GCCTGTTGGAGGGGCGCCGAGCGTGCCTTTTTGGCACGGGGCCGCCTTCG
TGAAGAATCCCTGTCTTATATAGGTACATAGGATGCAATAGACGGGGGTT
CCGTAACCGTAACCCTAATGTAATCCCAAACCGACCCCCCATTGGCCCTT
CCATACTTTATCCCATATGATTTCTTCCAGTAAAACCCGTGAAGGCTACT
ACTGTTGCCATGATGGGTCGGGGCTGGTGGTTGTTGCTTAGCCGTGTCGG
GGGGGGGCGTGACGGCTCTTTGCAACGCGTCAGCACGAGGGTGTCGGGCA
TGATCTCCCCTAGAGATCCAGGAGCTCGGACCCTGTGTGGCCGGTGACGG
GGGCTTTGTTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCACACAT
CGCGCGAGCACCGCAATGCTCCGCTGGCGCTCACGGCCACTACGGCCGCG
ATTTGAACCCTTGCCGACACCTAGACTGGTTGTCTTATTGATGAAAATCC
CCCCCCCCCCCCTAAGAAACGGCGTTGGCATTGCTCGTTTGAAACCTCTT
TTGCCTTTGGTTTTTGCTTCCTTGGGTTGCGGGGGATCCGCCCATCTACG
TGAATGTTTTGCGCCATCTCTGGTCGGTGGTCGCGTTGGTAGCGACCCTC
CGGTGCCCCCCTTACAATAGTGCCGGCCGTGACGGATGGGGGGATTGAGT
CAGGGCAGCGAGTGTGTAGTGGTCTGTATGTGAAGCTTCGGCGTCGAGAC
CTGACCGCCGAATGTTGGGGTAAATGACCAGTACTGCTGTACAACGAGCG
TGGAGCACAGGCAGCAGGGTCCGCAAGAGAGGCGTACATGGGCCTCAGTC
GCGTCGCTTTATTCAGCGGCGTCGGGCTTCTGCCCTATCGGGCCGGCCGA
TCACAACCATCTTATGATTGCACACGCGTGCAGCAGCCCTTTTCTGTCGC
TATTTAAGCGTCTGTTACACACCCCCCGCGCGCTCTCCTCCCGTCCGTGC
CCCCCCCGCCCCTTTCACGCTTGCCCAACATTTCGAGCCCCCCATCCCGG
CTTTCCCGTGATTCCACTCTCCTCGCCTCGTTTTCTACCCTCTTGGCCGC
CGCCGCCGCCGCGGCGACCGCTGCGTATTTAGGCTGGCGCTGGACAGACA
GCTGGAGGAGTTGTTGGCGCTGGAGGCGGTCTTGCCGGAGAAGGCTATGC
TGGCTCAGGACGAGAAGGATGCCGCGGTGGCGGAGGCGAGGGAACGAGGC
GCGCTCCGTAACCCTCTCACGCGCTACGCCGGCAAGGTCAGTCGGTGGAT
CGGTATTTTGTGTGCTTGTCACAGTCCCGTGTCCCGCGTTTTGTTTTGTT
TCGTGTGGGCTATTCGGTGGGCTATTCGGGCTTCAGCTCTCTGCCTGCCT
GCCTGCCTGCCTTCCTGCCTGCCTTTTTTTCACCTACACTGTATTCGCGT
GTTTTTGGTTTGCTGGTCGTGTCTGGCGTGCCTACGGTTCAGCTTTTGTT
TGTCTCCAATCTTGCGGAACCTTCTCTCTCCAAGTCTTGTATTGGGAGTC
TCTCTCCGTTGTTCTGCCCCGTTTTTTTCGTTTTTTTCCCGTCTCTCGTG
CGAATGGATTGTGAACTGCGGGTGCTATTTCCCTGCCCCGTAATTACGTG
CGTCGCAGAGAAGATGTCGACTATCGTGGGTACATATATATGTACTACTG
TAGGACCCCCCCCGGGGGGGGTTGAGAGCACGGCTATTGCTCTTAGCGTG
TGTTTAGTTTCAATACTAGTAGGGTTATCTTGTCGCCTGTCCCCGTTCCC
CTCGCGCCCCCGTTCGACCCCCCCCCCCCCCCCCCCCCCCCTTCCTCTCC
CCCTTTCCTCTTTCCCCCCACCCCACCCCCCCCTCCCCCCCCNNNNNNNN
NNTTTAGTTTCAATACTAGTAGGGTTATCTTGTCGCCTGTCCCCGTCCCC
CCCCCGCCCCCGTTCGCCCCCCCCCCCCCCCGCTCTTTTTTCCGCCTGTC
TTCCCTCCCCCTCCCCTGACCGGTATGCTTTTTCATGCTTTCAGGCCAAC
GATCCTGTCCAGTAGCCTCCGCAGAGCTTGTCTTAAGCTAACATATGGCA
TAGATAATAAAATTATAAAACGCCACTCTGTGTACCCTCACAAAAGGTAT
ACGACTGGAGTTAGAGACAAAAAAAAAAAAAGTACCATATAGAAATCGGG
AAAGGGGGTCGGGGGTTTCGTGAGGGCTAGGGTCAGGGTTACAGAGCCCC
TGTCTCTATTTCCTAGGAAAAGTTACTATCTTCGCGAAGGCGCCCCCCCC
CCCCCCTCTCCTCCTTCCCTGACCGGTAAAATGTGTTTTCCATGCTACGA
ATGCATCAGGCCGTGCCGACGGTCTTGTCCAACCGGAGGGCGGGGGGTGG
CCGCTTCGGCTGCAGCAGGGCCGCCGGCCGCGCTCCTCTGGCCGGGATGT
CCTCGCGGCTGCTGGACGACCGCATGCGGCCGCTCGTGACGGCGAACGGC
CACGGGGTCAACCCCGTCTTCTGCGTCAAGTTCGACCGCACGGGGCAGTA
CATTTTCACGGGGGCGGACGACATGCTTGTCAAGGTACTGACTGCTGCTG
TCTTCTGTGCCCCCTGCCCGCCGTCCCGCTCGCCTGCCGTGGTGTTGTGC
TGTGTTGTGTTGTGCCAATACCAAAAGCGATCGACAACTAGGCCGATGTG
TTTTCCCTTCCCCAAGAGCGTAGATGCGCGAGTTCTTATCGACAACGAGG
GAGAGGTGTGTGTTGCGTGTGTGTGTGCGGTGGGTGTGTCGCGTGTGTGT
CTTGTTGGTTTTATGTAGGCGTCGACCACGCTGACCGATTCACCGGCGAA
GATGCTTCAGCCGCAGCGGGCTGAGAAGCAACGATTTCCTGAGTGTCTGG
ACCGCTCGGTGCAGATAATAAACAAAAAAAAATGTGTTGTTCGTGAGAAG
CTTACTGGAAATTGCATTCCTTTTGGTAGGAGGTGCGGCGGAGGAACATC
GATGGCTGTCTTCTTCCTGACACTCTCGGCCCTGCCGTGGGCTCGATTTG
ACGGGCTTTGTGGGTAACAGACACCGCTGCCGCCGCGTGTGCGTGGCGGA
GGGAGACGCGCGCACATCTTTCGCTACCTTTGTCGCCGACGGGGCCTTTT
TTGTTGGCGTTCCGAAGAGCTCCGTTCTCTGGCGTCCGCCCTGATCTATG
TACGTTCATGTACGCACACACGCGTGTCCCGGCGCTACCACCGTGGTGTA
CCTAGAAACGCCGGAGGATTGGTATTTATCTCCACCGCAGTCCGGTCCTG
GTGACCGATGACCGAGCGGAACGTAGCCTGTAACCGATGTGTCAGGCCCC
TCACCCAGAAAGACAAAAGCCGATGATGGCCCACGATTGTAAAGCAATCG
CGCCGCTGATGGCTCGCTGATCCCGCAACCCCAGCCCCCAACCCCAACTT
GGGTCTTTGTTTTTTTTTCCATCCTCCTCTTCCTCCTTTCCTCCTTTCCT
CCCTGATGTAAACCATCCCTAAATCCGCGACCGGAGCATCGATTCGCTTC
ATTATTTCTTCTATATCCTCGGTCAGTACCAAAGCTGATCGTCGACCCGG
CACTCAGTATCGAGAAACTTGCCGAAAAGGAGGGAACAGAACAAAACAAA
AAACGAGTCAAATGACACTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GGACAATGAACAGGTCTGGGCGGCCAGCTCCGGTCGCCTGGTTCTCTGCC
TCCGCGGCCACAACGGGGTCATCACCGACATGGACCTCAGCCCCGACAAC
TCCATGCTCGTCACCTCCTCGGAGGACCGCACGGTGCGCGTCTGGGACCC
GAGGACCGGGGCCACGCTCGCCGTCCTGCGGGGGCACGTCTCCGCCGTCA
ACCTGGTGCGGTTCGCCCCGGGGGACAGCGTGGCCATGTCGGCGTCCGAG
GACGGCACTTGTCGGGTGTGGGACCTCAGAGATCAGGACAGGTGAGGATG
GTGGGGGGGGGGGTGGGGGGGGGGGTGGCCGGGGGGCATGCTGGTGGGAT
TCTTGCATTTCGTGGTGTACGGGGCGGGGGCTCCTGACCAAGCCTCGGAG
TGTAAGGGAGTGGATGGTGCGCCGTTGTTTCCGGTACTGCTGTACTGCTG
GAGGGTCTTTGCGAAGCCGCTTCCGACGTGTTTTGTGTCCTGCGGCTGTT
GTGCTGGCGGGTCTTCTTGCCGTGGCGCCGCCGCGAAGGGAAGAGGGGGT
GAGAGAGCGGTGCAGTAGCCTTGGCAAGTTTGACTACTACTAGAAGAAAT
AATATGGGATAAAGTAGAATACGGCTAATGGGGGGTCGGTTTGGGTTTGG
GGTCAGGGTTAGGATTACAAAACCCCTGTCTATTGATTCCCATACAGACA
GGAATTCTTCGCGAAGGTGTTATTCCGGGCAGTGGCTGGGCATGGTTACG
GGGTGGCTCGGTGTTTTTCCCACAGTGCGCAGACCGACCGAGCTTCCACG
TTGGGTGATTCGGCCACAACCAATTGCGCCCAATCCCAATCCCATATCTC
GAGGCTCACGACACCGAAATCAGATTTAACTTTGAAACGGGTTATCGATC
ATCACCCCCCCCCCCTCCTCCCCCCCTCCTCTTCCTTGACCGAAAACAAA
TCGAAAAAAGCATCGTGAGTGAGGACGTGGTACCCATAGTTCTGCCGCAC
ACGAACGAGCGGGGCGCCATGATCCAAGTCATGTGCCTCTCGGTTAGCCC
CGCCGGAAACCTGATCGCCGCGGGCTGCAGCGACGGCGCCGTCCGCGTGT
GGGCCTACGGCGACGCCGACGACGACGCGGCCTGGGGCACCGGCAAGCAC
AACACCCGCCGCGCCGGGCGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig4964:2934..9804+ >mRNA_L-elsbetiae_contig4964.12940.1 ID=mRNA_L-elsbetiae_contig4964.12940.1|Name=mRNA_L-elsbetiae_contig4964.12940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3198bp|location=Sequence derived from alignment at L-elsbetiae_contig4964:2934..9804+ (Laminarionema elsbetiae ELsaHSoW15) ATGGACAATCCATCCATTCCTGGCCCTGGCGGTGTATCACGCCAATCCCC CCCGGTAGAATCAGCAGCAGATGAGCCTCAGCCGGCCGGAAGACCTGTTT CGGACGAGCCTCAGCAGGAGGAGCTCTACTTTTTAATCGCCAATTTCCTC ACGAATGCCTCTCCCTGCTCTCGTACGGCGGCGGTACTGCAGCAAGAGCT GATGGACAATCCATCCATTCCTGGCCCTGGCGGTGTATCACGCCAATCCC CCCCGGTAGAATCAGCAGCAGATGAGCCTCAGCCGGCCGGAAGACCTGTT TCGGACGAGCCTCAGCAGGAGGAGCTCTACTTTTTAATCGCCAATTTCCT CACGAATGCCTCTCCCTGCTCTCGTACGGCGGCGGTACTGCAGCAAGAGC TGCGCGAGAGAAACCTCCTCGGGGTTGCCTACGACTGGGAGAGCAATGCC CGGCCAGCAAGCTTCGACGACGTTCGGCGTCGGCACCAGGCGTTGCCCGC AAACCAACTGGCTCGCGTTACGGCTCAGTACCTGCGACAACAGCAACTAG CAGGCTCTGCCACGGGGAGCAGCAGTGGTACGGCTATCGTGGTGGCGGAA CACCCTCGTTCTTTGTCCGGGCCTGGCGCGGCGAGGTCGCTTCTGTCGAG GGTGGAGCCCTTTGGCCACGACCGAGAGGCGAACGAGCGCGAGAGAAACC TCCTCGGGGTTGCCTACGACTGGGAGAGCAATGCCCGGCCAGCAAGCTTC GACGACGTTCGGCGTCGGCACCAGGCGTTGCCCGCAAACCAACTGGCTCG CGTTACGGCTCAGTACCTGCGACAACAGCAACTAGCAGGCTCTGCCACGG GGAGCAGCAGTGGTACGGCTATCGTGGTGGCGGAACACCCTCGTTCTTTG TCCGGGCCTGGCGCGGCGAGGTCGCTTCTGTCGAGGGTGGAGCCCTTTGG CCACGACCGAGAGGCGAACGAGAAAGCCCGCGCAGCTTGCGCCATCCGCG TGATCGAGGCGTGCGTGCAGACGGGGCAGGTGCAGGCCGACTCCAGGAAG GTTTCCGGCGACCTGGCCACCGTCCGCCTGAAGCTCCGCGCGCTCGAGCT CGAGGAGCAGGAGGAGGAGGAGGCCCGCGCCAACGAGCTGGCCGTCGGGT CGTACACGCGCGGGCGAAGCAAGGCGGCGTTGGTGCCGGGGCAGGAGAGC CAGGCGGAGCTCACAAGAAAGCCCGCGCAGCTTGCGCCATCCGCGTGATC GAGGCGTGCGTGCAGACGGGGCAGGTGCAGGCCGACTCCAGGAAGGTTTC CGGCGACCTGGCCACCGTCCGCCTGAAGCTCCGCGCGCTCGAGCTCGAGG AGCAGGAGGAGGAGGAGGCCCGCGCCAACGAGCTGGCCGTCGGGTCGTAC ACGCGCGGGCGAAGCAAGGCGGCGTTGGTGCCGGGGCAGGAGAGCCAGGC GGAGCTCACAAGGCTGGCGCTGGACAGACAGCTGGAGGAGTTGTTGGCGC TGGAGGCGGTCTTGCCGGAGAAGGCTATGCTGGCTCAGGACGAGAAGGAT GCCGCGGTGGCGGAGGCGAGGGAACGAGGCGCGCTCCGTAACCCTCTCAC GCGCTACGCCGGCAAGGCTGGCGCTGGACAGACAGCTGGAGGAGTTGTTG GCGCTGGAGGCGGTCTTGCCGGAGAAGGCTATGCTGGCTCAGGACGAGAA GGATGCCGCGGTGGCGGAGGCGAGGGAACGAGGCGCGCTCCGTAACCCTC TCACGCGCTACGCCGGCAAGGCCGTGCCGACGGTCTTGTCCAACCGGAGG GCGGGGGGTGGCCGCTTCGGCTGCAGCAGGGCCGCCGGCCGCGCTCCTCT GGCCGGGATGTCCTCGCGGCTGCTGGACGACCGCATGCGGCCGCTCGTGA CGGCGAACGGCCACGGGGTCAACCCCGTCTTCTGCGTCAAGTTCGACCGC ACGGGGCAGTACATTTTCACGGGGGCGGACGACATGCTTGTCAAGGCCGT GCCGACGGTCTTGTCCAACCGGAGGGCGGGGGGTGGCCGCTTCGGCTGCA GCAGGGCCGCCGGCCGCGCTCCTCTGGCCGGGATGTCCTCGCGGCTGCTG GACGACCGCATGCGGCCGCTCGTGACGGCGAACGGCCACGGGGTCAACCC CGTCTTCTGCGTCAAGTTCGACCGCACGGGGCAGTACATTTTCACGGGGG CGGACGACATGCTTGTCAAGGTCTGGGCGGCCAGCTCCGGTCGCCTGGTT CTCTGCCTCCGCGGCCACAACGGGGTCATCACCGACATGGACCTCAGCCC CGACAACTCCATGCTCGTCACCTCCTCGGAGGACCGCACGGTGCGCGTCT GGGACCCGAGGACCGGGGCCACGCTCGCCGTCCTGCGGGGGCACGTCTCC GCCGTCAACCTGGTGCGGTTCGCCCCGGGGGACAGCGTGGCCATGTCGGC GTCCGAGGACGGCACTTGTCGGGTGTGGGACCTCAGAGATCAGGACAGGT CTGGGCGGCCAGCTCCGGTCGCCTGGTTCTCTGCCTCCGCGGCCACAACG GGGTCATCACCGACATGGACCTCAGCCCCGACAACTCCATGCTCGTCACC TCCTCGGAGGACCGCACGGTGCGCGTCTGGGACCCGAGGACCGGGGCCAC GCTCGCCGTCCTGCGGGGGCACGTCTCCGCCGTCAACCTGGTGCGGTTCG CCCCGGGGGACAGCGTGGCCATGTCGGCGTCCGAGGACGGCACTTGTCGG GTGTGGGACCTCAGAGATCAGGACAGCATCGTGAGTGAGGACGTGGTACC CATAGTTCTGCCGCACACGAACGAGCGGGGCGCCATGATCCAAGTCATGT GCCTCTCGGTTAGCCCCGCCGGAAACCTGATCGCCGCGGGCTGCAGCGAC GGCGCCGTCCGCGTGTGGGCCTACGGCGACGCCGACGACGACGCGGCCTG GGGCACCGGCAAGCACAACACCCGCCGCGCCGGGCGACATCGTGAGTGAG GACGTGGTACCCATAGTTCTGCCGCACACGAACGAGCGGGGCGCCATGAT CCAAGTCATGTGCCTCTCGGTTAGCCCCGCCGGAAACCTGATCGCCGCGG GCTGCAGCGACGGCGCCGTCCGCGTGTGGGCCTACGGCGACGCCGACGAC GACGCGGCCTGGGGCACCGGCAAGCACAACACCCGCCGCGCCGGGCGA back to top
|