prot_L-elsbetiae_contig11407.1232.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11407.1232.1
Unique Nameprot_L-elsbetiae_contig11407.1232.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length146
Homology
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 6.890e-83
Identity = 135/146 (92.47%), Postives = 137/146 (93.84%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 146
            AFV+FVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHE AF  YLKDGQE+  IDV KIDFNVQV   G
Sbjct:  377 AFVDFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHEAAFSAYLKDGQETRKIDVAKIDFNVQVLTTG 522          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 1.250e-78
Identity = 128/142 (90.14%), Postives = 131/142 (92.25%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQV 142
            AFV FVNRDVGKFKNADLMCSFCDRI+KTGGEKLGD  VEEYLAKVVQLFSYL DKDLFA+IYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFT KMEGMMNDLAIGGDHE AF  YLKDGQE+  IDV KIDFNVQV
Sbjct:  112 AFVGFVNRDVGKFKNADLMCSFCDRIMKTGGEKLGD--VEEYLAKVVQLFSYLADKDLFAKIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTFKMEGMMNDLAIGGDHEAAFSAYLKDGQETRKIDVAKIDFNVQV 251          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA)

HSP 1 Score: 212 bits (539), Expect = 4.850e-62
Identity = 113/147 (76.87%), Postives = 120/147 (81.63%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKD-GQESGMIDVEKIDFNVQVCMYG 146
            AFVEFVNRDVGKFKNADLM +FCDRILKTGGE+L + EVEEYL KVVQLFSYLTDKDLFAE+YR QLA+RLLN RSASDD ERLMIGKLKLKCGSQFTSKMEGMMNDLAIG DH   F  + K    E G+    K DFNVQV   G
Sbjct:  379 AFVEFVNRDVGKFKNADLMSNFCDRILKTGGERLSEGEVEEYLGKVVQLFSYLTDKDLFAEMYRQQLAKRLLNQRSASDDAERLMIGKLKLKCGSQFTSKMEGMMNDLAIGVDHAAEFETHYKGRAPELGL----KSDFNVQVLTTG 521          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN)

HSP 1 Score: 204 bits (520), Expect = 2.580e-59
Identity = 105/146 (71.92%), Postives = 118/146 (80.82%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 146
            AFVEF NRDVGKF NA+LM SFCDRILK+GGEKL D +VE YL K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD ERLMIGKLKL+CGSQFT KMEGM+NDLAIG DH+  F + +K+ +   +    K+DF VQV   G
Sbjct:  375 AFVEFTNRDVGKFTNAELMSSFCDRILKSGGEKLSDEDVESYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQSDFDQTVKEDKSKSL---GKLDFAVQVLTTG 517          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A8J2SP16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP16_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.710e-59
Identity = 107/147 (72.79%), Postives = 118/147 (80.27%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLK-DGQESGMIDVEKIDFNVQVCMYG 146
            AFVEF NRDVGK  NA+LM SFCDRILK+GGEKLGD +VE +L K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD ERLMIGKLKL+CGSQFT KMEGM+NDLAIG DH+  F  Y+K D   S      K+DF+VQV   G
Sbjct:  379 AFVEFANRDVGKHTNAELMSSFCDRILKSGGEKLGDEDVEAFLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGHDHQADFESYVKADSSRS----TGKLDFSVQVLTTG 521          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.980e-58
Identity = 98/124 (79.03%), Postives = 112/124 (90.32%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKD 124
            AFVEFVN+DVGKFKNADL+ SFCDRILK GGEKLGDAEVE +L KVV LF+YLTDKDLFAEIYRNQLA+RLLN+RS+SDD E+LMIGKLK +CG+QFT KMEGM+NDLA+G DH+  F +YLKD
Sbjct:  379 AFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKVVNLFTYLTDKDLFAEIYRNQLAKRLLNARSSSDDWEKLMIGKLKHRCGAQFTGKMEGMLNDLAVGADHQKEFLEYLKD 502          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.270e-57
Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYL-KDGQESGMIDVEKI-DFNVQVCMYG 146
            AFVEFVN DVGKF NA+LM SFCDRILK+GGEKL D E+E YL K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD E+LMIGKLKL+CGSQFT KMEGM+NDLAIG DH+  F ++L K GQ+       KI +F+VQV   G
Sbjct:  375 AFVEFVNHDVGKFSNAELMSSFCDRILKSGGEKLSDEEIEAYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEKLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQQDFDQHLPKLGQD-------KIPEFSVQVLTTG 515          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: M4BNM2_HYAAE (CULLIN_2 domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4BNM2_HYAAE)

HSP 1 Score: 194 bits (492), Expect = 2.520e-55
Identity = 100/147 (68.03%), Postives = 116/147 (78.91%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVE-KIDFNVQVCMYG 146
            AFVEFVN+DVG   +A LM +FCDRILKTGGEKL D +VE+YL KVV +FSYLTDKDLFAEIYRNQLA+RLLN RSASDD E LMIGKLKL+CG+QFT KMEGMMNDLAIG DH   F  +LK  +E+   +    ++F+VQV   G
Sbjct:  371 AFVEFVNKDVGPDSSAKLMSTFCDRILKTGGEKLSDEQVEDYLEKVVFVFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEVLMIGKLKLRCGAQFTGKMEGMMNDLAIGSDHHQEFDSFLKKQRETSPSEAALNLEFSVQVLTTG 517          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A7S2WAA5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAA5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.520e-55
Identity = 102/146 (69.86%), Postives = 116/146 (79.45%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 146
            AF EFVNRDVGK +N+DLM SFCDRILKTGGEKL D EVE +L K VQLFSYL DKDLFAEIYRNQLA+RLLN RSASDD ERLMI KLK +CGSQFT KMEGM+NDLAIG DH+  F ++    Q +G    +++DF+VQV   G
Sbjct:  374 AFQEFVNRDVGKHRNSDLMSSFCDRILKTGGEKLSDEEVETFLEKTVQLFSYLVDKDLFAEIYRNQLAKRLLNQRSASDDHERLMISKLKQRCGSQFTGKMEGMLNDLAIGEDHQQDFEQHYS-AQVAGS---KQVDFSVQVLTTG 515          
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A2P4X829_9STRA (Cullin family protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X829_9STRA)

HSP 1 Score: 190 bits (483), Expect = 6.470e-55
Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 0
Query:    1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVE-KIDFNVQVCMYG 146
            AFVEFVN+DVG   +A LM +FCDRILKTGGEKL D +VE+YL KVV +FSYLTDKDLFAEIYRNQLA+RLLN RSAS D E LMIGKLKL+CG+QFT KMEGMMNDLAIG DH   F  +LK  +ES   +    ++F+VQV   G
Sbjct:  376 AFVEFVNKDVGPDSSAKLMSTFCDRILKTGGEKLSDEQVEDYLEKVVFVFSYLTDKDLFAEIYRNQLAKRLLNQRSASADAEVLMIGKLKLRCGAQFTGKMEGMMNDLAIGSDHHQEFEGFLKKQRESDSNEAAVNLEFSVQVLTTG 522          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYW9_9PHAE6.890e-8392.47CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
D7FJN2_ECTSI1.250e-7890.14CULLIN_2 domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YLK2_9STRA4.850e-6276.87Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
F0XVV7_AURAN2.580e-5971.92CULLIN_2 domain-containing protein n=1 Tax=Aureoco... [more]
A0A8J2SP16_9STRA3.710e-5972.79Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4D9DID3_9STRA2.980e-5879.03CULLIN_2 domain-containing protein n=3 Tax=Monodop... [more]
A0A7S3JSF7_9STRA4.270e-5772.30Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
M4BNM2_HYAAE2.520e-5568.03CULLIN_2 domain-containing protein n=26 Tax=Perono... [more]
A0A7S2WAA5_9STRA2.520e-5569.86Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A2P4X829_9STRA6.470e-5568.03Cullin family protein (Fragment) n=1 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016158Cullin homology domainSMARTSM00182cul_2coord: 44..146
e-value: 7.6E-9
score: 39.5
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 14..146
score: 24.676
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 1..143
e-value: 3.8E-42
score: 144.7
NoneNo IPR availableGENE3D1.20.1310.10coord: 13..125
e-value: 1.3E-35
score: 123.9
NoneNo IPR availablePANTHERPTHR11932:SF138CULLIN-1-RELATEDcoord: 1..142
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 1..142
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 13..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11407contigL-elsbetiae_contig11407:3606..5011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11407.1232.1mRNA_L-elsbetiae_contig11407.1232.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11407 3606..5011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11407.1232.1 ID=prot_L-elsbetiae_contig11407.1232.1|Name=mRNA_L-elsbetiae_contig11407.1232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLF
SYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSK
MEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016158Cullin_homology
IPR001373Cullin_N
IPR036317Cullin_homology_sf