mRNA_L-elsbetiae_contig11407.1232.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE) HSP 1 Score: 267 bits (682), Expect = 6.890e-83 Identity = 135/146 (92.47%), Postives = 137/146 (93.84%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 438
AFV+FVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHE AF YLKDGQE+ IDV KIDFNVQV G
Sbjct: 377 AFVDFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHEAAFSAYLKDGQETRKIDVAKIDFNVQVLTTG 522
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.250e-78 Identity = 128/142 (90.14%), Postives = 131/142 (92.25%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQV 426
AFV FVNRDVGKFKNADLMCSFCDRI+KTGGEKLGD VEEYLAKVVQLFSYL DKDLFA+IYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFT KMEGMMNDLAIGGDHE AF YLKDGQE+ IDV KIDFNVQV
Sbjct: 112 AFVGFVNRDVGKFKNADLMCSFCDRIMKTGGEKLGD--VEEYLAKVVQLFSYLADKDLFAKIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTFKMEGMMNDLAIGGDHEAAFSAYLKDGQETRKIDVAKIDFNVQV 251
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.850e-62 Identity = 113/147 (76.87%), Postives = 120/147 (81.63%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKD-GQESGMIDVEKIDFNVQVCMYG 438
AFVEFVNRDVGKFKNADLM +FCDRILKTGGE+L + EVEEYL KVVQLFSYLTDKDLFAE+YR QLA+RLLN RSASDD ERLMIGKLKLKCGSQFTSKMEGMMNDLAIG DH F + K E G+ K DFNVQV G
Sbjct: 379 AFVEFVNRDVGKFKNADLMSNFCDRILKTGGERLSEGEVEEYLGKVVQLFSYLTDKDLFAEMYRQQLAKRLLNQRSASDDAERLMIGKLKLKCGSQFTSKMEGMMNDLAIGVDHAAEFETHYKGRAPELGL----KSDFNVQVLTTG 521
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN) HSP 1 Score: 204 bits (520), Expect = 2.580e-59 Identity = 105/146 (71.92%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 438
AFVEF NRDVGKF NA+LM SFCDRILK+GGEKL D +VE YL K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD ERLMIGKLKL+CGSQFT KMEGM+NDLAIG DH+ F + +K+ + + K+DF VQV G
Sbjct: 375 AFVEFTNRDVGKFTNAELMSSFCDRILKSGGEKLSDEDVESYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQSDFDQTVKEDKSKSL---GKLDFAVQVLTTG 517
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A8J2SP16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP16_9STRA) HSP 1 Score: 204 bits (519), Expect = 3.710e-59 Identity = 107/147 (72.79%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLK-DGQESGMIDVEKIDFNVQVCMYG 438
AFVEF NRDVGK NA+LM SFCDRILK+GGEKLGD +VE +L K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD ERLMIGKLKL+CGSQFT KMEGM+NDLAIG DH+ F Y+K D S K+DF+VQV G
Sbjct: 379 AFVEFANRDVGKHTNAELMSSFCDRILKSGGEKLGDEDVEAFLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGHDHQADFESYVKADSSRS----TGKLDFSVQVLTTG 521
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.980e-58 Identity = 98/124 (79.03%), Postives = 112/124 (90.32%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKD 372
AFVEFVN+DVGKFKNADL+ SFCDRILK GGEKLGDAEVE +L KVV LF+YLTDKDLFAEIYRNQLA+RLLN+RS+SDD E+LMIGKLK +CG+QFT KMEGM+NDLA+G DH+ F +YLKD
Sbjct: 379 AFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEVENHLEKVVNLFTYLTDKDLFAEIYRNQLAKRLLNARSSSDDWEKLMIGKLKHRCGAQFTGKMEGMLNDLAVGADHQKEFLEYLKD 502
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA) HSP 1 Score: 199 bits (505), Expect = 4.270e-57 Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYL-KDGQESGMIDVEKI-DFNVQVCMYG 438
AFVEFVN DVGKF NA+LM SFCDRILK+GGEKL D E+E YL K VQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDD E+LMIGKLKL+CGSQFT KMEGM+NDLAIG DH+ F ++L K GQ+ KI +F+VQV G
Sbjct: 375 AFVEFVNHDVGKFSNAELMSSFCDRILKSGGEKLSDEEIEAYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEKLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQQDFDQHLPKLGQD-------KIPEFSVQVLTTG 515
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: M4BNM2_HYAAE (CULLIN_2 domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4BNM2_HYAAE) HSP 1 Score: 194 bits (492), Expect = 2.520e-55 Identity = 100/147 (68.03%), Postives = 116/147 (78.91%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVE-KIDFNVQVCMYG 438
AFVEFVN+DVG +A LM +FCDRILKTGGEKL D +VE+YL KVV +FSYLTDKDLFAEIYRNQLA+RLLN RSASDD E LMIGKLKL+CG+QFT KMEGMMNDLAIG DH F +LK +E+ + ++F+VQV G
Sbjct: 371 AFVEFVNKDVGPDSSAKLMSTFCDRILKTGGEKLSDEQVEDYLEKVVFVFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEVLMIGKLKLRCGAQFTGKMEGMMNDLAIGSDHHQEFDSFLKKQRETSPSEAALNLEFSVQVLTTG 517
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A7S2WAA5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAA5_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.520e-55 Identity = 102/146 (69.86%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVEKIDFNVQVCMYG 438
AF EFVNRDVGK +N+DLM SFCDRILKTGGEKL D EVE +L K VQLFSYL DKDLFAEIYRNQLA+RLLN RSASDD ERLMI KLK +CGSQFT KMEGM+NDLAIG DH+ F ++ Q +G +++DF+VQV G
Sbjct: 374 AFQEFVNRDVGKHRNSDLMSSFCDRILKTGGEKLSDEEVETFLEKTVQLFSYLVDKDLFAEIYRNQLAKRLLNQRSASDDHERLMISKLKQRCGSQFTGKMEGMLNDLAIGEDHQQDFEQHYS-AQVAGS---KQVDFSVQVLTTG 515
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Match: A0A2P4X829_9STRA (Cullin family protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X829_9STRA) HSP 1 Score: 190 bits (483), Expect = 6.470e-55 Identity = 100/147 (68.03%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 1 AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAIGGDHELAFGKYLKDGQESGMIDVE-KIDFNVQVCMYG 438
AFVEFVN+DVG +A LM +FCDRILKTGGEKL D +VE+YL KVV +FSYLTDKDLFAEIYRNQLA+RLLN RSAS D E LMIGKLKL+CG+QFT KMEGMMNDLAIG DH F +LK +ES + ++F+VQV G
Sbjct: 376 AFVEFVNKDVGPDSSAKLMSTFCDRILKTGGEKLSDEQVEDYLEKVVFVFSYLTDKDLFAEIYRNQLAKRLLNQRSASADAEVLMIGKLKLRCGAQFTGKMEGMMNDLAIGSDHHQEFEGFLKKQRESDSNEAAVNLEFSVQVLTTG 522 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11407.1232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11407.1232.1 >prot_L-elsbetiae_contig11407.1232.1 ID=prot_L-elsbetiae_contig11407.1232.1|Name=mRNA_L-elsbetiae_contig11407.1232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp AFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEVEEYLAKVVQLFback to top mRNA from alignment at L-elsbetiae_contig11407:3606..5011+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11407.1232.1 ID=mRNA_L-elsbetiae_contig11407.1232.1|Name=mRNA_L-elsbetiae_contig11407.1232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1406bp|location=Sequence derived from alignment at L-elsbetiae_contig11407:3606..5011+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11407:3606..5011+ >mRNA_L-elsbetiae_contig11407.1232.1 ID=mRNA_L-elsbetiae_contig11407.1232.1|Name=mRNA_L-elsbetiae_contig11407.1232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig11407:3606..5011+ (Laminarionema elsbetiae ELsaHSoW15)back to top |