mRNA_L-elsbetiae_contig11407.1231.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE) HSP 1 Score: 277 bits (708), Expect = 1.100e-86 Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
+ +AENALEAEKLRVANYLNPSTEAKLLRVCDDEML KREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMG IIKRREAKIEGGEKDTNQDPNFVKELLALHDKYM VVNDQFAGNSLLQKALKEA
Sbjct: 230 MIKAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLEKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNDQFAGNSLLQKALKEA 377
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA) HSP 1 Score: 209 bits (532), Expect = 5.330e-61 Identity = 103/148 (69.59%), Postives = 124/148 (83.78%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE AL+ E+ RV +YLN +TE KLLRVCD EML K + LLEKEGSGC+VLLANDKS+DLSRM+RLF+R+P+GL+PMA I+++HIT G +I RRE +IEGGEKD+NQDP VKELLALHDKYM VV +QF GNSLLQKALK+A
Sbjct: 232 LIKAEAALDCERARVGHYLNAATEPKLLRVCDREMLEKHQTELLEKEGSGCRVLLANDKSEDLSRMFRLFSRIPQGLQPMANIVREHITAAGNDVIVRREERIEGGEKDSNQDPTVVKELLALHDKYMAVVTEQFGGNSLLQKALKDA 379
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.720e-59 Identity = 103/148 (69.59%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE ALEAEK RVANYLN S+E KLLRVC+ E+L KRE LLEK+GSGC+ LLAND+++DL+RM+RLF+R+P GL PMA ++K HI MGT II RRE ++E GEKDTNQDP VKELLALHDKY+ VV QF+GNSL QKALKEA
Sbjct: 228 LEKAEKALEAEKQRVANYLNSSSEPKLLRVCESELLEKRETSLLEKDGSGCRALLANDRANDLARMFRLFSRVPNGLPPMAALVKAHIEAMGTDIISRREQRLENGEKDTNQDPALVKELLALHDKYLAVVAQQFSGNSLFQKALKEA 375
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A7S3UPV7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPV7_HETAK) HSP 1 Score: 194 bits (492), Expect = 1.720e-59 Identity = 99/149 (66.44%), Postives = 117/149 (78.52%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQ-DPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
+ +AE ALE E+ RVANYLNPSTEAKLLRV D E+L KRE +LLEKEGSGC+ LLANDK++DL+RMYRLF+R+P GL PMA I + + G +I RREAK+ GE+D DP +VKELLALHDKYM VV +QF GNSL QKALKEA
Sbjct: 40 MVKAERALEEERQRVANYLNPSTEAKLLRVVDQELLEKRESVLLEKEGSGCRALLANDKAEDLARMYRLFSRVPDGLAPMAAIAQQFVESRGVEVIARREAKLGSGERDPGGGDPAYVKELLALHDKYMAVVTEQFGGNSLFQKALKEA 188
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN) HSP 1 Score: 204 bits (519), Expect = 3.880e-59 Identity = 102/148 (68.92%), Postives = 123/148 (83.11%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE AL+AEK RVA+YLN ++E KLLRVC+ E+L RE +LLEKEGSGC+ LLANDK+ DLSRMYRLF+R+P GL PMA +++ HI MG +I RREA++E GEKD+NQDP FVKELLALHDKYM VV+ QFAGN+L QKALKEA
Sbjct: 228 LAKAEVALDAEKARVAHYLNSASEPKLLRVCEHEILELRETVLLEKEGSGCRALLANDKAADLSRMYRLFSRVPNGLPPMAALVRAHIEAMGNEVINRREARLEAGEKDSNQDPAFVKELLALHDKYMAVVSAQFAGNALFQKALKEA 375
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI) HSP 1 Score: 192 bits (487), Expect = 2.360e-56 Identity = 99/111 (89.19%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 103 MLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKAL 435
ML KREKILLEK GSGCKVLLANDKSDDLSR YRLFNRLPKGLEPMAEIIKDHITEM IIKR AKIEGGEKD NQDPNFVKELLALH KYM VVNDQF GNSLLQKAL
Sbjct: 1 MLEKREKILLEKAGSGCKVLLANDKSDDLSRTYRLFNRLPKGLEPMAEIIKDHITEMRNEIIKRPGAKIEGGEKDINQDPNFVKELLALHGKYMAVVNDQFVGNSLLQKAL 111
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A7R9ZBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBG0_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.770e-56 Identity = 93/148 (62.84%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE AL EK RVA+YLNP++E+KLLRVC++E+L K E +LLEKEGSGC+VLLANDKS+DL RM+ LF+RL KGL PMA+I++ I+ MG IK+R+A+++GGEKD N DP FVK L+ALH+KY+GV+ F+G+SL QKALK+A
Sbjct: 268 LIKAERALIEEKNRVADYLNPASESKLLRVCEEEILEKVEMVLLEKEGSGCRVLLANDKSEDLRRMFHLFSRLDKGLNPMADIVEKFISSMGNECIKKRQARLDGGEKDKNDDPKFVKSLIALHEKYLGVIKTDFSGHSLFQKALKDA 415
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A7S4ILC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILC2_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.720e-55 Identity = 93/148 (62.84%), Postives = 122/148 (82.43%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE AL EK RVA+YLNP++E+KLLRVC++E+L K E +LLEKEGSGC+VLLANDKS+DL RM+ LF+RL KGL PMA+I++ I+ MG IK+R+A+++GGEKD N DP FVK L+ALH+KY+GV+ F+G+SL QKALK+A
Sbjct: 234 LIKAERALIEEKNRVADYLNPASESKLLRVCEEEILEKVEMVLLEKEGSGCRVLLANDKSEDLRRMFHLFSRLDKGLNPMADIVEKFISSMGNECIKKRQARLDGGEKDKNDDPKFVKSLIALHEKYLGVIKTDFSGHSLFQKALKDA 381
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A7S3ZYF8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYF8_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.740e-55 Identity = 97/152 (63.82%), Postives = 119/152 (78.29%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPK----GLEPMAEIIKDHITEMGTAIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE ALEAE RVA+YLN ++E KLLRVC+ E+L RE +LLEKEGSGC+ LLAND+ DL+RMYRLF R+P GL PMA +++ HI +MG II RREA++ G KD+NQDP FVKELLALHDKY+ VV++QF GN+L QKALKEA
Sbjct: 228 LAKAEVALEAEAARVAHYLNGASEPKLLRVCEHEILELRETVLLEKEGSGCRALLANDRKADLARMYRLFGRVPNTPTHGLPPMAALVRAHIEQMGNDIIDRREARLSEGAKDSNQDPAFVKELLALHDKYLAVVSEQFGGNALFQKALKEA 379
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.230e-53 Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 1
Query: 1 LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGCKVLLANDKSDDLSRMYRLFNRLPKGLEPMAEIIKDHITEMGTAIIKRREAKI-EGGEKDTNQDPNFVKELLALHDKYMGVVNDQFAGNSLLQKALKEA 444
L +AE ALE EK RVANYLN TE KLL+V +E+L K+E LLE+EGSGC +LL NDK +DLSRMYRLF+R+P GL PMA+I++ HI MG +I +REA++ E GEKDTNQDPNFVK LL+LHDK++GVVN QF NSL KALKEA
Sbjct: 231 LLKAEAALEEEKARVANYLNAETEEKLLKVVIEELLEKQETTLLEREGSGCAMLLTNDKYEDLSRMYRLFSRVPSGLLPMAKIVQAHIERMGNEVINQREARMHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEA 379 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11407.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11407.1231.1 >prot_L-elsbetiae_contig11407.1231.1 ID=prot_L-elsbetiae_contig11407.1231.1|Name=mRNA_L-elsbetiae_contig11407.1231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp LFQAENALEAEKLRVANYLNPSTEAKLLRVCDDEMLAKREKILLEKEGSGback to top mRNA from alignment at L-elsbetiae_contig11407:438..2921+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11407.1231.1 ID=mRNA_L-elsbetiae_contig11407.1231.1|Name=mRNA_L-elsbetiae_contig11407.1231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2484bp|location=Sequence derived from alignment at L-elsbetiae_contig11407:438..2921+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11407:438..2921+ >mRNA_L-elsbetiae_contig11407.1231.1 ID=mRNA_L-elsbetiae_contig11407.1231.1|Name=mRNA_L-elsbetiae_contig11407.1231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=888bp|location=Sequence derived from alignment at L-elsbetiae_contig11407:438..2921+ (Laminarionema elsbetiae ELsaHSoW15)back to top |