prot_L-elsbetiae_contig11387.1214.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11387.1214.1
Unique Nameprot_L-elsbetiae_contig11387.1214.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length35
Homology
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BLAST of mRNA_L-elsbetiae_contig11387.1214.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 3.180e-10
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    2 EEKLRAMRSGCTIDVVRYKGIFVGVEGGGAKGRE 35
            EEKLRAMRSGCTID VRYKG+FV VEGGG KGRE
Sbjct:  276 EEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGRE 309
[Close]
BLAST of mRNA_L-elsbetiae_contig11387.1214.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 1.260e-6
Identity = 24/28 (85.71%), Postives = 25/28 (89.29%), Query Frame = 0 
Query:    8 MRSGCTIDVVRYKGIFVGVEGGGAKGRE 35
            MRSGCTID VRYKG+FV VEGGG KGRE
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGRE 28
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11387.1214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDE8_ECTSI3.180e-1088.24RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE1.260e-685.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11387contigL-elsbetiae_contig11387:1989..2093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11387.1214.1mRNA_L-elsbetiae_contig11387.1214.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11387 1796..2093 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11387.1214.1 ID=prot_L-elsbetiae_contig11387.1214.1|Name=mRNA_L-elsbetiae_contig11387.1214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=35bp
MEEKLRAMRSGCTIDVVRYKGIFVGVEGGGAKGRE
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