prot_L-elsbetiae_contig11369.1202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11369.1202.1
Unique Nameprot_L-elsbetiae_contig11369.1202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.290e-7
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   39 CIHSGCTTRPSYGVAGGGRPEFCSAHKKDGMVNVASKRC 77
            C H+ CT RP+YGVAG  + EFCS H +DGMVNV +KRC
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 42          
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 5.160e-7
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   33 GRMPRNCIHSGCTTRPSYGVAGGGRPEFCSAHKKDGMVNVASKRC 77
            G     C H  CT RP+YGVAG  + EFCS H +DGMVNV +KRC
Sbjct:   58 GSRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKRC 102          
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: A0A6H5JGG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG2_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.120e-7
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   39 CIHSGCTTRPSYGVAGGGRPEFCSAHKKDGMVNVASKRC 77
            C   GCTTRPSYG AG  + EFCS HKK GM+N+ SKRC
Sbjct:   27 CQEDGCTTRPSYGNAGCKKAEFCSQHKKPGMMNLVSKRC 65          
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: D7FY22_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY22_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 9.350e-7
Identity = 25/45 (55.56%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   33 GRMPRNCIHSGCTTRPSYGVAGGGRPEFCSAHKKDGMVNVASKRC 77
            G+  R C   GCT RPSYG+ G  + EFCS H K GM NV  KRC
Sbjct:   25 GKGQRCCQEHGCTARPSYGIDGSKKAEFCSKHSKPGMTNVTKKRC 69          
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: A0A6H5KY67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY67_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.120e-6
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0
Query:   33 GRMPRNCIHSGCTTRPSYGVAGGGRPEFCSAHKKDGMVNVASKRC 77
            G+  R C   GCT RPSYG+ G  + EFCS H K GM+N+  KRC
Sbjct:   21 GKGNRCCQEHGCTVRPSYGIDGCKKAEFCSKHSKPGMINLTKKRC 65          
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Match: D8LDM3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM3_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 4.430e-5
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   37 RNCIHSGCTTRPSYGV--AGGGRPEFCSAHKKDGMVNV 72
            R CIH GCT RPS+G   A   +PE+C+ HKK+GMVNV
Sbjct:   10 RGCIHPGCTKRPSFGARDAKNNKPEYCTVHKKEGMVNV 47          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11369.1202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FI73_ECTSI4.290e-764.10EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE5.160e-757.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGG2_9PHAE6.120e-766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY22_ECTSI9.350e-755.56EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KY67_9PHAE3.120e-653.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDM3_ECTSI4.430e-560.53EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018523Isocitrate lyase/phosphorylmutase, conserved sitePROSITEPS00161ISOCITRATE_LYASEcoord: 191..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11369contigL-elsbetiae_contig11369:5568..6284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11369.1202.1mRNA_L-elsbetiae_contig11369.1202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11369 5568..6284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11369.1202.1 ID=prot_L-elsbetiae_contig11369.1202.1|Name=mRNA_L-elsbetiae_contig11369.1202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
CYTLALQLARGVTTSSVSPPCVLWPAEQPRKPGRMPRNCIHSGCTTRPSY
GVAGGGRPEFCSAHKKDGMVNVASKRCGQQGCTKQPSYGMGGSGEREFCS
AHKKGGMVDLKYKRRCSHQGCIKQPSYGVAGSGKPPEFCSAHKKDGMVDV
VNKRCGYQGCIKRSLYGVGGSGKPEFCSAHKKDRMVDLNNKRCGHQGCTK
QPSYGVAGSGKAEFCSAHKKEGMVNVASKRCGQQGCTKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018523Isocitrate_lyase_ph_CS