prot_L-elsbetiae_contig11282.1141.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11282.1141.1
Unique Nameprot_L-elsbetiae_contig11282.1141.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length62
Homology
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BLAST of mRNA_L-elsbetiae_contig11282.1141.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.730e-17
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 MGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVRV 40
            +GDFR+SYA SWHRLE +WVGFPLPHDISSNV +KWKV V
Sbjct:  123 VGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVLV 162
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BLAST of mRNA_L-elsbetiae_contig11282.1141.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 5.140e-17
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 MGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVRV 40
            +GDFR+SYA +WHRLE +WVGFPLPHDISSNV VKWKV V
Sbjct:  141 VGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVLV 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11282.1141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKH4_ECTSI1.730e-1780.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ50_9PHAE5.140e-1780.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028131Tubulinyl-Tyr carboxypeptidasePFAMPF14822Vasohibincoord: 3..43
e-value: 4.7E-6
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11282contigL-elsbetiae_contig11282:3257..3442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11282.1141.1mRNA_L-elsbetiae_contig11282.1141.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11282 3091..3442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11282.1141.1 ID=prot_L-elsbetiae_contig11282.1141.1|Name=mRNA_L-elsbetiae_contig11282.1141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=62bp
MGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVRVGNLLLCSPNM
SNRPRRASKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028131VASH1