prot_L-elsbetiae_contig10067.112.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10067.112.1
Unique Name	prot_L-elsbetiae_contig10067.112.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	125

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig10067.112.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 8.120e-15
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 0

Query:   27 NKTKVILQFLLGVLEATGLEVIAARLALRQLLPPNVLPLGDITTDGGWSGLTAHQLWTLSSVLGLLFAPIFA 98
            N  K I+ F+L  L++ G E++  R A R++LPPNV P+ DIT+ GGW+ LT  QLW +SS+   L APIF+
Sbjct:  130 NAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFS 201

[Close]

BLAST of mRNA_L-elsbetiae_contig10067.112.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 9.130e-15
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 0

Query:   27 NKTKVILQFLLGVLEATGLEVIAARLALRQLLPPNVLPLGDITTDGGWSGLTAHQLWTLSSVLGLLFAPIFA 98
            N  K I+ F+L  L++ G E++  R A R++LPPNV P+ DIT+ GGW+ LT  QLW +SS+   L APIF+
Sbjct:  235 NAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFS 306

[Close]

BLAST of mRNA_L-elsbetiae_contig10067.112.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.950e-14
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0

Query:   27 NKTKVILQFLLGVLEATGLEVIAARLALRQLLPPNVLPLGDITTDGGWSGLTAHQLWTLSSVLGLLFAPIFADASSM 103
            N  K I+ F++  L+  G E++ AR A  ++LPPNV P+ DIT+ GGWS LT  QLW +SS    L APIF+   ++
Sbjct:  141 NSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNL 217

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10067.112.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10067.112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G4Y8_ECTSI	8.120e-15	48.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FZI4_ECTSI	9.130e-15	48.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FWW9_ECTSI	5.950e-14	45.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 55..81
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..30
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 82..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 108..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10067	contig	L-elsbetiae_contig10067:2252..2626 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10067.112.1	mRNA_L-elsbetiae_contig10067.112.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10067 1426..2892 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10067.112.1 ID=prot_L-elsbetiae_contig10067.112.1|Name=mRNA_L-elsbetiae_contig10067.112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
MISCIPSPALTIVNRPLPRYKLHVPQNKTKVILQFLLGVLEATGLEVIAA
RLALRQLLPPNVLPLGDITTDGGWSGLTAHQLWTLSSVLGLLFAPIFADA
SSMVCVYKLQKNYIACNLSHVLTF*