mRNA_L-elsbetiae_contig1004.89.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig1004.89.1
Unique Name	mRNA_L-elsbetiae_contig1004.89.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5KEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ2_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 2.480e-53
Identity = 206/414 (49.76%), Postives = 214/414 (51.69%), Query Frame = 1

Query:    4 MVFAELHRLFLKQRQQ*CQQREERYQLQHQPGLEQRNQKLLYLQKK*----------------VQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENEEDEMSPSVEPRPPPEGTRAEPVTPKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGGGSVEI------EEGARVWSVKPRPW---------AAWRRDSRGGQRPEAWSTQGHLKVGPGPEEAL*KL---------------------------------------------------------------------TGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF 945
            MVFAEL RLFL+QRQ  CQQREERYQLQHQPGLE+R+Q+LL    K                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXX         +  M P VEPRPPPE TRAEPV PKP+QRTRRGRA GCTEERLS RPAARSVVYRRAFEG                                               GAG GGGSVEI       EGARV SVKP            AA RR S GG   EAWST G LKVGPGPEEAL KL                                                                     TGGAPA+VG  EGG GQ +AEEGAGGG HGGEAP EARGQKRG  EGF
Sbjct:   28 MVFAELRRLFLQQRQHQCQQREERYQLQHQPGLERRDQELLLSTGKRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEXXXXEGGVGESKPKQRMPPPVEPRPPPESTRAEPVMPKPNQRTRRGRAGGCTEERLSRRPAARSVVYRRAFEG-----------------------------------------------GAGTGGGSVEIGPPQPKSEGARVGSVKPSRANGPGGGGRRAACRRGSCGGPWSEAWSTGGLLKVGPGPEEALWKLRRRPPVAPQPKSEGARVGSVKPRPRRGRAAGSMEERLPRRPAVRSVLYGRTFEGGAGTGGDSVEIEEEATGGAPAEVGGGEGGVGQAQAEEGAGGGQHGGEAPVEARGQKRGRREGF 394

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JRC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC9_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 9.960e-29
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 2

Query:  863 RRGRAAGCMEERLPRRPVVRSVVYRRVFEDILPGRAFVTRSCGGRVVFGVPAPLENKGDSGTRPRWQLRLDASRT 1087
            RRGRA GC EERL RRP  R VVY R FED+LPGRAFVTRSCGGR VFGVPAPLENKG+SGTRP WQLRL+AS T
Sbjct:  165 RRGRAEGCTEERLSRRPAARRVVYWRAFEDVLPGRAFVTRSCGGRGVFGVPAPLENKGESGTRPWWQLRLNASFT 239

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ9_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.280e-27
Identity = 99/218 (45.41%), Postives = 109/218 (50.00%), Query Frame = 1

Query:  349 TRAEPVTPKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGGGSVEIE-------EGARVWSVKPRPW------AAWRRDSRGGQRPEAWST------QGHLKVGPGPEEAL*KLTGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF 945
            TRAEPV PKPSQRTRRGRAEGCTEERLS RPAARSVVYRRAFEG                                               GAG GGGSV+I+          R W  +P P       AA R + R  +RP   S       +G      G  E   + T GAPA+V   EGG GQ +AEEGAGGG HGGEA AEARGQ+R L E F
Sbjct:   76 TRAEPVMPKPSQRTRRGRAEGCTEERLSRRPAARSVVYRRAFEG-----------------------------------------------GAGTGGGSVKIDLWRPSLRRRGRGWG-RPSPSRGGGGRAAGRMEERPPRRPVVRSVVYWRALEGGAGTRGGSLEIEEEATRGAPAEVIGGEGGVGQAQAEEGAGGGQHGGEASAEARGQRRALREDF 245

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5L0N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N7_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.280e-26
Identity = 102/256 (39.84%), Postives = 108/256 (42.19%), Query Frame = 1

Query:  370 PKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGGGSVEIEEGARVWSVKPRP---WAAWRRDSRGGQRPEAWSTQGHLKVGPGPEEAL*KLTGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF*RYIARPGFRHPFVRRKSG----IRRPRPPREQGRQWHETSVATAPGRQPHTLQRGKHGRL 1116
            PKPSQRTRRGRAEGCTEERLS RPAARSVVYRRAFEG                                               GAG GGGSVEIEE ARV SVKPRP    AA   + R  +RP   S   HL+     E+ L                                    P  A                       F  R  G    +RR R PREQGR+ HET VATAP RQPH LQRGKHGRL
Sbjct:    2 PKPSQRTRRGRAEGCTEERLSRRPAARSVVYRRAFEG-----------------------------------------------GAGTGGGSVEIEEAARVGSVKPRPRRGGAAGSMEERLPRRPVVRSML-HLRAS---EDML------------------------------------PGRA-----------------------FFARSCGGRGVVRRTRSPREQGREGHETLVATAPERQPHILQRGKHGRL 147

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JP68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP68_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 2.930e-25
Identity = 142/348 (40.80%), Postives = 158/348 (45.40%), Query Frame = 1

Query:    4 MVFAELHRLFLKQRQQ*CQQREERYQLQHQPGLEQRNQKLLYLQKK*VQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENEEDEMSPSVEPRPPPEGTRAEPVTPKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGGGSVEI------EEGARVWSVKPRPW---AAWRRDSR-----------------GG--QRPEAW------STQGHLKVGPGPEEAL*KLTGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF 945
            M FAELH+LFL+QRQQ CQQREERYQLQHQPGLE+R+Q+LLYLQ+  VQQ  XXXXXXXXXXXXXXXX                                  MS  VEPRP  EG R E                                                      R   S   P     +        G  L+     GAG GGGSVEI       EGARV SVKP P    A    + R                 GG  +RP A       + +G  + G G  E   + T GAPA+VG  EGG GQ +AEEGAGGG HGGEAPAEARGQKR LPEGF
Sbjct:   22 MFFAELHQLFLQQRQQQCQQREERYQLQHQPGLERRDQELLYLQENEVQQQHXXXXXXXXXXXXXXXXQERFLQTKLQKLRPKAGEVLWKTR----------MSLPVEPRPKSEGARVESXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARRRGSRGGPRPEAWS-------TGGLLKVC---GAGTGGGSVEIGPPQPKSEGARVGSVKPEPRMGRAVGSMEERLPLRPVAEEGAGGGLHGGGLLRRPAARIVIYRRAFEGGAETGGGSVEIEKEATSGAPAEVGGGEGGFGQAQAEEGAGGGQHGGEAPAEARGQKRNLPEGF 339

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: D7FMZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ2_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 8.330e-22
Identity = 67/158 (42.41%), Postives = 78/158 (49.37%), Query Frame = 2

Query:  620 VGLGPEEALWKLRRGRGYGR*SPGRGQHGGETPAEASGQKRGLPKGI*RWGLDRRRLCEN*PVAPQPKSDGTRVGTVKSRPRRGRAAGCMEERLPRRPVVRSVVYRRVFEDILPGRAFVTRSCGGRVVFGVPAPLENKGDSGTRPRWQLRLDASRTHC 1093
            VG GPEE LWKLRR                 TP                            PVAP+ + +G R+G++K RPRRG  AG MEERL RRPV RSVVYRR FE    G AF+TRSCGGR +FGVPA L  +G      +W     A+   C
Sbjct:   24 VGPGPEEPLWKLRR-----------------TP----------------------------PVAPRRELEGARLGSIKPRPRRGPVAGRMEERLSRRPVTRSVVYRRAFE----GLAFITRSCGGRGLFGVPATLREQGR-----QWHATSVATAPEC 127

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.670e-20
Identity = 98/227 (43.17%), Postives = 112/227 (49.34%), Query Frame = 1

Query:  310 MSPSVEPRPPPEGTRAEPVTPKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGG-GSVEIEEGARVWSVKPRPWAAWRRDSRGGQRPEAWS--------TQGHLKVGP------GPEEAL*KLTGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF 945
            MSP +EPRP  +G R E V P+P    RRGRAEGCTEERL  RPAARSVVY+RAFEG                       G  VG +V      GV    +   G   GG G  + E+GA             RR  RG   P+ +         T  H + G       G EE   +  G APA VG  EGG GQ +AEE AGGG HGGE P EARGQ+R LPEGF
Sbjct:    1 MSPPMEPRPKSKGARVESVKPRP----RRGRAEGCTEERLPRRPAARSVVYQRAFEG---------------------GAG-TVGGSVEIEEATGVAPVEV---GRDEGGVGQAQAEDGAGGGQHGGEASTEARRRKRG--LPKVYQRTFGGVLLTISHCRWGRDRRRLCGIEE---EAPGVAPAVVGGGEGGVGQAQAEEEAGGGQHGGETPTEARGQERALPEGF 193

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JP41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP41_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.440e-16
Identity = 80/212 (37.74%), Postives = 81/212 (38.21%), Query Frame = 1

Query:  310 MSPSVEPRPPPEGTRAEPVTPKPSQRTRRGRAEGCTEERLSLRPAARSVVYRRAFEGVFCLINTCVSCSCYRLLASLLAPG*AVGNAVCHRACEGVFLRYLIAGGAGAGGGSVEIEEGARVWSVKPRPWAAWRRDSRGGQRPEAWSTQGHLKVGPGPEEAL*KLTGGAPAKVGRDEGGDGQVKAEEGAGGGLHGGEAPAEARGQKRGLPEGF 945
            MSP VEPRPPPE TRAEPV PKP    RRGRA G  EER   RP  RSV+Y RAFEG                                               GA  GGGSVEIEE A                                             TGG PA VG             G GGG HG EAPAEARGQKR LPE F
Sbjct:    1 MSPPVEPRPPPERTRAEPVMPKP----RRGRAAGSMEERHPRRPVVRSVLYMRAFEG-----------------------------------------------GARTGGGSVEIEEEA---------------------------------------------TGGDPAYVGXXXXXXXXXXXXXGVGGGQHGREAPAEARGQKRALPEVF 116

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5L3E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E3_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.470e-14
Identity = 70/159 (44.03%), Postives = 76/159 (47.80%), Query Frame = 3

Query:    3 HGFCGAAPAFSEAAPAIVPAXXXXXXXXXXXXXRATEPEAAL--STEKIGAAATPAASXXXXXXXXXXXXXXXXXXXXXXXXXAAADTGSDRRRGRLYGKRGG*DEPIGGASAAAGGDEGGAGHAQAEPADQEGAGGGLHGGEALAEARGQKRGLPEGF 473
            HGFCGAAPAFS AAPAIVPA             RA E E  L  + +K+    T                             A  ++ S  R GR     G                EGGAGHAQAEPADQEG GGGLHGGEALAEARGQ+RGLPE F
Sbjct:   44 HGFCGAAPAFSAAAPAIVPAEG-----------RAAEQERFLRMTLQKMQQQQTQRPKVVEALWKTRRMSPPVEPRPPPVEIRAQPESPSPSRGGRRRWSLGRRRRH-----------EGGAGHAQAEPADQEGEGGGLHGGEALAEARGQERGLPESF 180

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BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: D7FUQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 3.290e-12
Identity = 51/112 (45.54%), Postives = 56/112 (50.00%), Query Frame = 2

Query:  617 QVGLGPEEALWKLRRGRGYGR*SPGRGQHGGETPAEASGQKRGLPKGI*RWGLDRRRLCEN*PVAPQPKSDGTRVGTVKSRPRRGRAAGCMEERLPRRPVVRSVVYRRVFED 952
            +V  GPEEALWKLRR                                         RL    PVA QPK +G RVG+VK RPRRGRAAG +EERLPRRP  RSVVY R F+D
Sbjct:  212 EVWPGPEEALWKLRR-----------------------------------------RL----PVAAQPKLEGARVGSVKPRPRRGRAAGSIEERLPRRPAARSVVYLRTFKD 278

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A6H5KEJ2_9PHAE	2.480e-53	49.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRC9_9PHAE	9.960e-29	81.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNQ9_9PHAE	1.280e-27	45.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L0N7_9PHAE	1.280e-26	39.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JP68_9PHAE	2.930e-25	40.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FMZ2_ECTSI	8.330e-22	42.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JF72_9PHAE	1.670e-20	43.17	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JP41_9PHAE	4.440e-16	37.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L3E3_9PHAE	1.470e-14	44.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUQ1_ECTSI	3.290e-12	45.54	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1004	contig	L-elsbetiae_contig1004:22375..24538 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	4
Model size	1767
Cds size	525
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1004.89.1	prot_L-elsbetiae_contig1004.89.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig1004 23152..23967 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815237.454271-UTR-L-elsbetiae_contig1004:22374..22635	1622815237.454271-UTR-L-elsbetiae_contig1004:22374..22635	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 22375..22635 +
1691682788.212817-UTR-L-elsbetiae_contig1004:22374..22635	1691682788.212817-UTR-L-elsbetiae_contig1004:22374..22635	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 22375..22635 +
1622815237.4680057-UTR-L-elsbetiae_contig1004:22741..23151	1622815237.4680057-UTR-L-elsbetiae_contig1004:22741..23151	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 22742..23151 +
1691682788.2211099-UTR-L-elsbetiae_contig1004:22741..23151	1691682788.2211099-UTR-L-elsbetiae_contig1004:22741..23151	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 22742..23151 +
1622815237.5097096-UTR-L-elsbetiae_contig1004:23967..24538	1622815237.5097096-UTR-L-elsbetiae_contig1004:23967..24538	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 23968..24538 +
1691682788.276525-UTR-L-elsbetiae_contig1004:23967..24538	1691682788.276525-UTR-L-elsbetiae_contig1004:23967..24538	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig1004 23968..24538 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815237.479389-CDS-L-elsbetiae_contig1004:23151..23245	1622815237.479389-CDS-L-elsbetiae_contig1004:23151..23245	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23152..23245 +
1691682788.2285879-CDS-L-elsbetiae_contig1004:23151..23245	1691682788.2285879-CDS-L-elsbetiae_contig1004:23151..23245	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23152..23245 +
1622815237.4893322-CDS-L-elsbetiae_contig1004:23364..23549	1622815237.4893322-CDS-L-elsbetiae_contig1004:23364..23549	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23365..23549 +
1691682788.2495525-CDS-L-elsbetiae_contig1004:23364..23549	1691682788.2495525-CDS-L-elsbetiae_contig1004:23364..23549	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23365..23549 +
1622815237.5008602-CDS-L-elsbetiae_contig1004:23721..23967	1622815237.5008602-CDS-L-elsbetiae_contig1004:23721..23967	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23722..23967 +
1691682788.2663949-CDS-L-elsbetiae_contig1004:23721..23967	1691682788.2663949-CDS-L-elsbetiae_contig1004:23721..23967	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1004 23722..23967 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig1004:22375..24538+
coding sequence from alignment at L-elsbetiae_contig1004:22375..24538+

protein sequence of mRNA_L-elsbetiae_contig1004.89.1

>prot_L-elsbetiae_contig1004.89.1 ID=prot_L-elsbetiae_contig1004.89.1|Name=mRNA_L-elsbetiae_contig1004.89.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
MVGKAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKIDRWRPSQ
SRTGRGWGRSSQGRGGGGRRAAWRRGSRGGPWSEAWSTGGFLKIYCQAGL
SSPVRAEEEWYSASPPPSRTRATVARDLGGNCAWTPAAHTAAGEARAANF
VCIGINTLSRAYVEMDLCTRASDD*

mRNA from alignment at L-elsbetiae_contig1004:22375..24538+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig1004.89.1 ID=mRNA_L-elsbetiae_contig1004.89.1|Name=mRNA_L-elsbetiae_contig1004.89.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2164bp|location=Sequence derived from alignment at L-elsbetiae_contig1004:22375..24538+ (Laminarionema elsbetiae ELsaHSoW15)
GGCATGGTTTTTGCGGAGCTGCACCGGCTTTTTCTGAAGCAGCGCCAGCA
ATAGTGCCAGCAGAGGGAAGAGCGGTACCAGCTACAGCACCAGCCCGGTC
TAGAGCAACGGAACCAGAAGCTGCTCTATCTACAGAAAAAATAGGTGCAG
CAGCAACACCAGCAGCGTCGTCTGGAGAAACAGCTGCAGCAAGAGCAGCA
GGCGGGGCAGGAGCGTTTTCTGCAGACGACGCTGCAGAAAATGCAGCAGC
AGCAGACACAGGTGCGTACATGTTGATTTATTTCCTTTGAGAGAGAGACG
TCGTTTCTTTCTTTGATACACATAGCTCGTTGACACACTCCCCAAATCTT
TCTTCCTCATCGTTCAGGCAGCGACCGAAGGCGGGGGAGGCTCTATGGAA
AACGAGGAGGATGAGATGAGCCCATCGGTGGAGCCTCGGCCGCCGCCGGA
GGGGACGAGGGCGGAGCCGGTCACGCCCAAGCCGAGCCAGCGGACCAGGA
GGGGGCGGGCGGAGGGCTGCACGGAGGAGAGGCTCTCGCTGAGGCCCGCG
GCCAGAAGCGTGGTCTACCGGAGGGCTTTTGAAGGTGTGTTTTGTTTGAT
AAATACATGTGTATCTTGTAGCTGTTACAGGCTACTGGCCTCGCTCCTCG
CTCCCGGATAAGCCGTCGGAAACGCAGTCTGCCACCGGGCTTGTGAGGGT
GTGTTTTTACGATATCTCATTGCAGGTGGGGCTGGGGCCGGAGGAGGCTC
TGTGGAAATTGAGGAGGGGGCGAGGGTATGGTCGGTAAAGCCCAGGCCGT
GGGCAGCATGGAGGAGAGACTCCCGCGGAGGCCAGCGGCCAGAAGCGTGG
TCTACCCAAGGGCATTTGAAGGTATGTTTGGTGTGTACTGAAGTAGTCTG
GCTTCGCTTCCCGCTCCCAGATAAGCGGTCGGAAACGCAGTCTACCACCG
AACTTGTGACGGTGTGTATTTTTACGATATCTCATTGCAGGTGGGGCCTG
GACCGGAGGAGGCTCTGTGAAAATTGACCGGTGGCGCCCCAGCCAAAGTC
GGACGGGACGAGGGTGGGGACGGTCAAGTCAAGGCCGAGGAGGGGGCGGG
CGGCGGGCTGCATGGAGGAGAGGCTCCCGCGGAGGCCCGTGGTCAGAAGC
GTGGTCTACCGGAGGGTTTTTGAAGGTGTGTGTTTATATTGTAGCTTCTA
TAGCAACTTTGGCCTCGCTCCCCGCTCCCGGATAAGCGGCCGGAAACGCA
GTCTACCAGCGGACTTTTGACGGTGTGTTTTTTTACGATATCTCATTGCA
CAACTTCAATCGTAATACCCCACCGCCCGCAATATTTCCCGCCTCAGATA
TATTGCCAGGCCGGGCTTTCGTCACCCGTTCGTGCGGAGGAAGAGTGGTA
TTCGGCGTCCCCGCCCCCCTCGAGAACAAGGGCGACAGTGGCACGAGACC
TCGGTGGCAACTGCGCCTGGACGCCAGCCGCACACACTGCAGCGGGGGAA
GCACGGGCGGCTAATTTTGTTTGTATTGGGATTAATACGTTGAGTAGGGC
CTATGTTGAAATGGATTTATGTACACGGGCGTCTGATGATTAACACATTT
TTGTTAGAATTAGTATCAAGGCTTGACACATTATTTGGGGCCTGTTTCGT
TTTTTTCAGGGGGTATACACGGATGGCTCCCTTTTTTTTGTGGTGCTTAA
TGCATGAATTAGGGCCTCGCTCGGGGTTTTAGACGGAGAATACGATAAAA
AAAGGGGCAGGGCACAACGTCCTTGGCAGGTATCACGTCGTGTGCGTACA
CACGTGGCCACTTTGCTATGCCCAGAGGGTTGTGCAAATGAACCCTGTAT
AACGTTGCCACCATGTGAGGGTTGACAGAAATAGAGACCCTGTCAGGGGT
TAGGGCCCTGGGGAGTGCCCGGTTGTGTGACCCTGTACAGGGGTGCACCT
TCTCTGGGAAGACAGAAGTACAGACCCTGCCAGGGTTAGGCCCCTGGGGC
GTGCCCGGTGCAAACGAACCCTGTATAACGTTGCACCCATGTCTGGGTTG
ACAGAAATACAGACCCCGCCAGGGTTAAGCGCCTGGGGAGCGCCCGGGGG
TGTGGTACACGAATCGGAACTCGGTAGAGTATAAGATTTATTAATAATAA
TATGATTTATTTCT

Coding sequence (CDS) from alignment at L-elsbetiae_contig1004:22375..24538+

>mRNA_L-elsbetiae_contig1004.89.1 ID=mRNA_L-elsbetiae_contig1004.89.1|Name=mRNA_L-elsbetiae_contig1004.89.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig1004:22375..24538+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCGGTAAAGCCCAGGCCGTGGGCAGCATGGAGGAGAGACTCCCGCG
GAGGCCAGCGGCCAGAAGCGTGGTCTACCCAAGGGCATTTGAAGATGGTC
GGTAAAGCCCAGGCCGTGGGCAGCATGGAGGAGAGACTCCCGCGGAGGCC
AGCGGCCAGAAGCGTGGTCTACCCAAGGGCATTTGAAGGTGGGGCCTGGA
CCGGAGGAGGCTCTGTGAAAATTGACCGGTGGCGCCCCAGCCAAAGTCGG
ACGGGACGAGGGTGGGGACGGTCAAGTCAAGGCCGAGGAGGGGGCGGGCG
GCGGGCTGCATGGAGGAGAGGCTCCCGCGGAGGCCCGTGGTCAGAAGCGT
GGTCTACCGGAGGGTTTTTGAAGGTGGGGCCTGGACCGGAGGAGGCTCTG
TGAAAATTGACCGGTGGCGCCCCAGCCAAAGTCGGACGGGACGAGGGTGG
GGACGGTCAAGTCAAGGCCGAGGAGGGGGCGGGCGGCGGGCTGCATGGAG
GAGAGGCTCCCGCGGAGGCCCGTGGTCAGAAGCGTGGTCTACCGGAGGGT
TTTTGAAGATATATTGCCAGGCCGGGCTTTCGTCACCCGTTCGTGCGGAG
GAAGAGTGGTATTCGGCGTCCCCGCCCCCCTCGAGAACAAGGGCGACAGT
GGCACGAGACCTCGGTGGCAACTGCGCCTGGACGCCAGCCGCACACACTG
CAGCGGGGGAAGCACGGGCGGCTAATTTTGTTTGTATTGGGATTAATACG
TTGAGTAGGGCCTATGTTGAAATGGATTTATGTACACGGGCGTCTGATGA
TTAAATATATTGCCAGGCCGGGCTTTCGTCACCCGTTCGTGCGGAGGAAG
AGTGGTATTCGGCGTCCCCGCCCCCCTCGAGAACAAGGGCGACAGTGGCA
CGAGACCTCGGTGGCAACTGCGCCTGGACGCCAGCCGCACACACTGCAGC
GGGGGAAGCACGGGCGGCTAATTTTGTTTGTATTGGGATTAATACGTTGA
GTAGGGCCTATGTTGAAATGGATTTATGTACACGGGCGTCTGATGATTAA