prot_L-elsbetiae_contig1004.89.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1004.89.1
Unique Nameprot_L-elsbetiae_contig1004.89.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5KEJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ2_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.690e-21
Identity = 60/93 (64.52%), Postives = 67/93 (72.04%), Query Frame = 0
Query:    4 KAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKIDRWRPSQ--SRTGRGWGRSSQGRGGGGRRAAWRRGSRGGPWSEAWSTGGFLKI 94
            + +A G  EERL RRPAARSVVY RAFEGGA TGGGSV+I   +P    +R G      + G GGGGRRAA RRGS GGPWSEAWSTGG LK+
Sbjct:  174 RGRAGGCTEERLSRRPAARSVVYRRAFEGGAGTGGGSVEIGPPQPKSEGARVGSVKPSRANGPGGGGRRAACRRGSCGGPWSEAWSTGGLLKV 266          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JNQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ9_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.710e-20
Identity = 51/68 (75.00%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    4 KAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKIDRWRPSQSRTGRGWGRSSQGRGGGGRRA 71
            + +A G  EERL RRPAARSVVY RAFEGGA TGGGSVKID WRPS  R GRGWGR S  RGGGGR A
Sbjct:   91 RGRAEGCTEERLSRRPAARSVVYRRAFEGGAGTGGGSVKIDLWRPSLRRRGRGWGRPSPSRGGGGRAA 158          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JIQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ0_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.040e-10
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0
Query:   90 GFLKIYCQAGLSSPVRAEEEWYSASPPPSRTRATVARDLGGNCA 133
            G  +I CQAGLSSPVRAE+E  SASP PSRTRATV RDLGGNCA
Sbjct:  194 GLPEICCQAGLSSPVRAEKEGCSASPLPSRTRATVTRDLGGNCA 237          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JP41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP41_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 9.380e-9
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    4 KAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKID 44
            + +A GSMEER PRRP  RSV+Y RAFEGGA TGGGSV+I+
Sbjct:   25 RGRAAGSMEERHPRRPVVRSVLYMRAFEGGARTGGGSVEIE 65          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5L0N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.030e-8
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    4 KAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKID 44
            + +A G  EERL RRPAARSVVY RAFEGGA TGGGSV+I+
Sbjct:   10 RGRAEGCTEERLSRRPAARSVVYRRAFEGGAGTGGGSVEIE 50          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JF72_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF72_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 2.890e-7
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    4 KAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKID 44
            + +A G  EERLPRRPAARSVVY RAFEGGA T GGSV+I+
Sbjct:   25 RGRAEGCTEERLPRRPAARSVVYQRAFEGGAGTVGGSVEIE 65          
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Match: A0A6H5JP68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP68_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 9.160e-6
Identity = 32/59 (54.24%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    6 QAVGSMEERLP-------------------RRPAARSVVYPRAFEGGAWTGGGSVKIDR 45
            +AVGSMEERLP                   RRPAAR V+Y RAFEGGA TGGGSV+I++
Sbjct:  231 RAVGSMEERLPLRPVAEEGAGGGLHGGGLLRRPAARIVIYRRAFEGGAETGGGSVEIEK 289          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1004.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KEJ2_9PHAE2.690e-2164.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNQ9_9PHAE1.710e-2075.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIQ0_9PHAE1.040e-1079.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP41_9PHAE9.380e-970.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0N7_9PHAE4.030e-873.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF72_9PHAE2.890e-773.17Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JP68_9PHAE9.160e-654.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1004contigL-elsbetiae_contig1004:23152..23967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1004.89.1mRNA_L-elsbetiae_contig1004.89.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1004 22375..24538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1004.89.1 ID=prot_L-elsbetiae_contig1004.89.1|Name=mRNA_L-elsbetiae_contig1004.89.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
MVGKAQAVGSMEERLPRRPAARSVVYPRAFEGGAWTGGGSVKIDRWRPSQ
SRTGRGWGRSSQGRGGGGRRAAWRRGSRGGPWSEAWSTGGFLKIYCQAGL
SSPVRAEEEWYSASPPPSRTRATVARDLGGNCAWTPAAHTAAGEARAANF
VCIGINTLSRAYVEMDLCTRASDD*
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