mRNA_L-elsbetiae_contig1098.881.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI) HSP 1 Score: 199 bits (505), Expect = 3.600e-57 Identity = 88/94 (93.62%), Postives = 92/94 (97.87%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + SYPKEGAYC+GLFLDGARWNRQ+GCLEEPPPMELFYQMPVIHFKPVESKKKA KG+YVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW Sbjct: 4634 LSSYPKEGAYCDGLFLDGARWNRQEGCLEEPPPMELFYQMPVIHFKPVESKKKAPKGVYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 4727
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A835Z4V1_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V1_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.240e-44 Identity = 71/94 (75.53%), Postives = 84/94 (89.36%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 V + PKEGAYC+GLFL+GARW++ DGCL EP PM+L+++MPVIHFKPVE+KKKA KG+YVCP YMYP+RTG+RERPSFVIAAELRAGK EFW Sbjct: 4485 VPAAPKEGAYCDGLFLEGARWSKIDGCLVEPEPMQLYHEMPVIHFKPVEAKKKAPKGVYVCPVYMYPVRTGTRERPSFVIAAELRAGKATPEFW 4578
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: F0YHG4_AURAN (Dynein_C domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG4_AURAN) HSP 1 Score: 142 bits (357), Expect = 1.740e-41 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + + K+G+YC GLFL+G+RW+ + CL EP PMELF MPVIHFKPVE+KKK+SKG+Y CP YMYPLRTGSRERPSFVI+ ++++G S++W Sbjct: 48 ITQHAKDGSYCYGLFLEGSRWDFDNSCLTEPTPMELFCSMPVIHFKPVENKKKSSKGMYSCPLYMYPLRTGSRERPSFVISCDVKSGVQTSDYW 141
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: F0YMC7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC7_AURAN) HSP 1 Score: 147 bits (370), Expect = 5.660e-39 Identity = 61/94 (64.89%), Postives = 78/94 (82.98%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + + K+G+YC GLFL+GARW+ +GCL EP PMELF MPVIHFKPVE+KKK+SKG+Y CP YMYPLRTGSRERPSFVI+ ++++G S++W Sbjct: 2175 ITQHAKDGSYCHGLFLEGARWDLDNGCLTEPTPMELFCSMPVIHFKPVENKKKSSKGLYSCPLYMYPLRTGSRERPSFVISCDVKSGVQTSDYW 2268
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A7S3GTM2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTM2_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.740e-38 Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + YP +G Y G+FL+GA WN G LEE PMEL MP+IHFKPVE K++ +KG Y CP YMYP+R+GSRERPS+V++ ELR GK S+FW Sbjct: 3 ISGYPNDGVYVSGVFLEGATWNYTGGYLEESRPMELISPMPIIHFKPVEGKRRVAKGFYTCPLYMYPIRSGSRERPSYVVSVELRGGKFSSDFW 96
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A7S1CJP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJP2_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.580e-37 Identity = 59/94 (62.77%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + +YPKEGAY G+FL+GARW+ GCL EP PMELF MP++HFKPVE+KKK+SKG+Y CP YMYP+RTG+RERPSF+IA ++++G FW Sbjct: 644 ITAYPKEGAYVRGMFLEGARWDIDHGCLVEPRPMELFCPMPLVHFKPVENKKKSSKGMYTCPLYMYPVRTGTRERPSFMIAVDVKSGAVDGTFW 737
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A482RYH6_9ARCH (Dynein_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYH6_9ARCH) HSP 1 Score: 131 bits (329), Expect = 1.620e-36 Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 6 VCSYPKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 + PK+G Y G+F++GA WN G LEE PMEL MP+IHFKPVE K++A+KG Y CP YMYP+R+GSRERPS+V+ +LRAGK ++FW Sbjct: 98 ILGVPKDGVYVSGIFIEGATWNYTGGYLEESRPMELISTMPIIHFKPVEGKRRANKGFYSCPVYMYPVRSGSRERPSYVVTVDLRAGKFSADFW 191
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: K3W7J7_GLOUD (Dynein_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7J7_GLOUD) HSP 1 Score: 127 bits (318), Expect = 2.430e-35 Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 3 Query: 18 PKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPS-EFW 287 PK+GAY +GL L+GARW+ CL EP PMEL MP++HFKPVE KKK+SKG+Y CP YMYPLRTG+RERPSF+IA +L++G S + W Sbjct: 61 PKDGAYIKGLILEGARWDFDHDCLTEPHPMELNSGMPILHFKPVEPKKKSSKGLYSCPLYMYPLRTGTRERPSFMIAVDLKSGTGKSPDIW 151
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A5B8MZU6_9CHLO (Heavy chain of dynein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZU6_9CHLO) HSP 1 Score: 135 bits (339), Expect = 8.670e-35 Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 3 Query: 18 PKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELRAGKHPSEFW 287 PKEG Y +G FL+GA W+ ++GCL EP PMEL MP+IHFKP+E+KKK KG+Y+CP Y+YP+RTG+RERPSFVI EL++G + SE W Sbjct: 4364 PKEGVYIKGAFLEGAGWDFENGCLVEPEPMELIVPMPIIHFKPIENKKKVPKGVYLCPMYLYPVRTGTRERPSFVINVELKSGSNGSEHW 4453
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Match: A0A6A5AJA7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AJA7_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.960e-34 Identity = 61/92 (66.30%), Postives = 75/92 (81.52%), Query Frame = 3 Query: 18 PKEGAYCEGLFLDGARWNRQDGCLEEPPPMELFYQMPVIHFKPVESKKKASKGIYVCPTYMYPLRTGSRERPSFVIAAELR--AGKHPSEFW 287 PK+GAY +GLFL+GARW+ + CL EP PM+L+ MP+IHFKPVE+KKKASKG Y CP YMYP+RTG+RERPSF+IA +LR AGK P + W Sbjct: 540 PKDGAYVKGLFLEGARWDFEHDCLAEPNPMDLYCNMPMIHFKPVETKKKASKGTYSCPLYMYPIRTGTRERPSFMIAVDLRCGAGKSP-DLW 630 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1098.881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1098.881.1 >prot_L-elsbetiae_contig1098.881.1 ID=prot_L-elsbetiae_contig1098.881.1|Name=mRNA_L-elsbetiae_contig1098.881.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=96bp PLSAATRRRVRTARGFSLTALGGTGRTAAWRNLLRWSFSTRCLSFTSSPWback to top mRNA from alignment at L-elsbetiae_contig1098:18369..19149- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1098.881.1 ID=mRNA_L-elsbetiae_contig1098.881.1|Name=mRNA_L-elsbetiae_contig1098.881.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=781bp|location=Sequence derived from alignment at L-elsbetiae_contig1098:18369..19149- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1098:18369..19149- >mRNA_L-elsbetiae_contig1098.881.1 ID=mRNA_L-elsbetiae_contig1098.881.1|Name=mRNA_L-elsbetiae_contig1098.881.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=576bp|location=Sequence derived from alignment at L-elsbetiae_contig1098:18369..19149- (Laminarionema elsbetiae ELsaHSoW15)back to top |