mRNA_L-elsbetiae_contig10955.860.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE) HSP 1 Score: 224 bits (572), Expect = 3.150e-70 Identity = 142/180 (78.89%), Postives = 148/180 (82.22%), Query Frame = 1 Query: 10 MGSFRSTPVAAAAAALVLATSSVPSG-VTFVDGFVVPPSASAIARSMQGAGIASAQSPGPRAGAPWRGSSISSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 MG FRSTPVA AAA + A+SS SG VT V GFVVPPSAS IARS GAGI SAQS R WR +S STALQMNLADRFLRVAKANLNN+LQ EDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLA +WYDRAQLALQNGDENLAREALARRQQQ+ Sbjct: 1 MGPFRSTPVAVAAALALAASSSPSSGIVTLVGGFVVPPSASTIARSTPGAGIVSAQSH-VRRSPSWR-----TSGGPSTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQL 174
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.900e-42 Identity = 81/101 (80.20%), Postives = 92/101 (91.09%), Query Frame = 1 Query: 244 ALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 A+QMNLADRF RV KANLN++LQ +EDPEKILEQAVEDMQKDL+KIRQSYAEVSATQKRMERQK++A+ L++ WY RAQLAL GDE LAREAL+RRQQQV Sbjct: 55 AVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQV 155
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.730e-41 Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 1 Query: 250 QMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 QMNLADRF+RVAKANLN+LLQ +EDPEK+LEQAV+DMQ+DLVK+RQSYAEVSATQKRMERQ+ EA+R+A WY RAQLAL+ GDE LAREALARRQ QV Sbjct: 53 QMNLADRFMRVAKANLNSLLQKVEDPEKVLEQAVDDMQRDLVKVRQSYAEVSATQKRMERQRAEANRIAEEWYKRAQLALEKGDEGLAREALARRQTQV 151
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2XXS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS6_9STRA) HSP 1 Score: 146 bits (368), Expect = 9.950e-41 Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = 1 Query: 211 SSISSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 SS S S R T L MN+ADRF+RVAKAN+NN+L +EDPEKILEQAV DMQKDLV +RQSYAEVSAT KR+ERQK++AD+LA WY RA+LA+ GDE LAREAL RRQQQV Sbjct: 65 SSQSRSVRFDTGLHMNMADRFMRVAKANINNMLSKVEDPEKILEQAVLDMQKDLVNVRQSYAEVSATSKRLERQKEQADKLAADWYARAELAMTKGDETLAREALTRRQQQV 176
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2H6D6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H6D6_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.510e-38 Identity = 77/108 (71.30%), Postives = 93/108 (86.11%), Query Frame = 1 Query: 223 SSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 SS RSSTAL MNL DRF RVAKAN+NN+L+ +EDPEKI+ QAVEDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA WY RAQLAL+ +E+LAREAL RRQQQV Sbjct: 44 SSSRSSTALSMNLFDRFSRVAKANVNNILKSLEDPEKIMNQAVEDMQADLVKVRQSYAEITATQRRLLKQKEQADALAQDWYKRAQLALEKDNESLAREALNRRQQQV 151
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2A8X3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8X3_TRICV) HSP 1 Score: 140 bits (354), Expect = 9.510e-38 Identity = 76/109 (69.72%), Postives = 94/109 (86.24%), Query Frame = 1 Query: 220 SSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 SSS S+TAL MNL DRF RVAK+NLNN+L+ +EDPEKI+ QA+EDMQ DLVKIRQSYAE++ATQ+R+ +QK++AD L WY+RAQLALQ G+E+LA+EAL RRQQQV Sbjct: 33 SSSSSSATALSMNLFDRFSRVAKSNLNNVLKNLEDPEKIMNQAIEDMQTDLVKIRQSYAEITATQRRLLKQKEQADALGEDWYNRAQLALQKGNESLAKEALNRRQQQV 141
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A8J2SJN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA) HSP 1 Score: 140 bits (353), Expect = 9.840e-38 Identity = 76/105 (72.38%), Postives = 89/105 (84.76%), Query Frame = 1 Query: 232 RSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 R +TALQMN DRF RVA+AN+NN+L MEDPEK+L QAVED+QKDLV IRQSYAEV ATQKR +RQK +AD+LA WY RAQLAL+ GD+ LAREAL+R+QQQV Sbjct: 32 RPTTALQMNFFDRFKRVAEANINNVLGKMEDPEKVLNQAVEDLQKDLVTIRQSYAEVMATQKRQQRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQV 136
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S1D0V6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0V6_CYCTE) HSP 1 Score: 138 bits (347), Expect = 1.440e-36 Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 1 Query: 241 TALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 TAL MN+ DRF RVAKAN+NN+L+ +EDPEKIL QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA WY RAQLAL+ G+E+LAREAL+RRQQQ+ Sbjct: 54 TALNMNIFDRFSRVAKANINNILKNLEDPEKILNQALEDMQGDLVKVRQSYAEITATQRRLLKQKEQADSLAQDWYQRAQLALEKGNEDLAREALSRRQQQL 155
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: K0SI43_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SI43_THAOC) HSP 1 Score: 137 bits (346), Expect = 1.440e-36 Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 229 RRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 R SST L MNL DRF RVAK+N+NN+L+ +EDPEKI+ QAVEDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD L WY RAQLALQ G+E LA+EAL+RRQQQ+ Sbjct: 43 RPSSTVLSMNLFDRFSRVAKSNINNVLKSLEDPEKIMNQAVEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQM 148
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A6V2AWV5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AWV5_9STRA) HSP 1 Score: 136 bits (343), Expect = 4.030e-36 Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 229 RRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 546 R S+TAL MNL DRF RVAK+N+NN+L+ +EDPEKI+ QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA WY RAQLALQ +E LAREAL RRQQQV Sbjct: 44 RSSTTALSMNLFDRFSRVAKSNINNVLKSLEDPEKIMTQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALAQDWYQRAQLALQKENETLAREALNRRQQQV 149 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10955.860.1 >prot_L-elsbetiae_contig10955.860.1 ID=prot_L-elsbetiae_contig10955.860.1|Name=mRNA_L-elsbetiae_contig10955.860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp MGSFRSTPVAAAAAALVLATSSVPSGVTFVDGFVVPPSASAIARSMQGAGback to top mRNA from alignment at L-elsbetiae_contig10955:2359..6298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10955.860.1 ID=mRNA_L-elsbetiae_contig10955.860.1|Name=mRNA_L-elsbetiae_contig10955.860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3940bp|location=Sequence derived from alignment at L-elsbetiae_contig10955:2359..6298+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10955:2359..6298+ >mRNA_L-elsbetiae_contig10955.860.1 ID=mRNA_L-elsbetiae_contig10955.860.1|Name=mRNA_L-elsbetiae_contig10955.860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1074bp|location=Sequence derived from alignment at L-elsbetiae_contig10955:2359..6298+ (Laminarionema elsbetiae ELsaHSoW15)back to top |