prot_L-elsbetiae_contig10955.860.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig10955.860.1
Unique Name	prot_L-elsbetiae_contig10955.860.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	179

Homology

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A6H5KE64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KE64_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 7.960e-70
Identity = 142/180 (78.89%), Postives = 148/180 (82.22%), Query Frame = 0

Query:    1 MGSFRSTPVAAAAAALVLATSSVPSG-VTFVDGFVVPPSASAIARSMQGAGIASAQSPGPRAGAPWRGSSISSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            MG FRSTPVA AAA  + A+SS  SG VT V GFVVPPSAS IARS  GAGI SAQS   R    WR     +S   STALQMNLADRFLRVAKANLNN+LQ  EDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLA +WYDRAQLALQNGDENLAREALARRQQQ+
Sbjct:    1 MGPFRSTPVAVAAALALAASSSPSSGIVTLVGGFVVPPSASTIARSTPGAGIVSAQSH-VRRSPSWR-----TSGGPSTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQL 174

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: W7TN53_9STRA (Membrane-associated 30 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN53_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.710e-42
Identity = 81/101 (80.20%), Postives = 92/101 (91.09%), Query Frame = 0

Query:   79 ALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            A+QMNLADRF RV KANLN++LQ +EDPEKILEQAVEDMQKDL+KIRQSYAEVSATQKRMERQK++A+ L++ WY RAQLAL  GDE LAREAL+RRQQQV
Sbjct:   55 AVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQV 155

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A836CIH9_9STRA (PspA/IM30 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.560e-41
Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 0

Query:   81 QMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            QMNLADRF+RVAKANLN+LLQ +EDPEK+LEQAV+DMQ+DLVK+RQSYAEVSATQKRMERQ+ EA+R+A  WY RAQLAL+ GDE LAREALARRQ QV
Sbjct:   53 QMNLADRFMRVAKANLNSLLQKVEDPEKVLEQAVDDMQRDLVKVRQSYAEVSATQKRMERQRAEANRIAEEWYKRAQLALEKGDEGLAREALARRQTQV 151

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2XXS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXS6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 8.950e-41
Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = 0

Query:   68 SSISSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            SS S S R  T L MN+ADRF+RVAKAN+NN+L  +EDPEKILEQAV DMQKDLV +RQSYAEVSAT KR+ERQK++AD+LA  WY RA+LA+  GDE LAREAL RRQQQV
Sbjct:   65 SSQSRSVRFDTGLHMNMADRFMRVAKANINNMLSKVEDPEKILEQAVLDMQKDLVNVRQSYAEVSATSKRLERQKEQADKLAADWYARAELAMTKGDETLAREALTRRQQQV 176

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2H6D6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H6D6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.960e-38
Identity = 77/108 (71.30%), Postives = 93/108 (86.11%), Query Frame = 0

Query:   72 SSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            SS RSSTAL MNL DRF RVAKAN+NN+L+ +EDPEKI+ QAVEDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA  WY RAQLAL+  +E+LAREAL RRQQQV
Sbjct:   44 SSSRSSTALSMNLFDRFSRVAKANVNNILKSLEDPEKIMNQAVEDMQADLVKVRQSYAEITATQRRLLKQKEQADALAQDWYKRAQLALEKDNESLAREALNRRQQQV 151

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S2A8X3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8X3_TRICV)

HSP 1 Score: 140 bits (354), Expect = 8.570e-38
Identity = 76/109 (69.72%), Postives = 94/109 (86.24%), Query Frame = 0

Query:   71 SSSRRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            SSS  S+TAL MNL DRF RVAK+NLNN+L+ +EDPEKI+ QA+EDMQ DLVKIRQSYAE++ATQ+R+ +QK++AD L   WY+RAQLALQ G+E+LA+EAL RRQQQV
Sbjct:   33 SSSSSSATALSMNLFDRFSRVAKSNLNNVLKNLEDPEKIMNQAIEDMQTDLVKIRQSYAEITATQRRLLKQKEQADALGEDWYNRAQLALQKGNESLAKEALNRRQQQV 141

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A8J2SJN9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJN9_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.870e-38
Identity = 76/105 (72.38%), Postives = 89/105 (84.76%), Query Frame = 0

Query:   75 RSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            R +TALQMN  DRF RVA+AN+NN+L  MEDPEK+L QAVED+QKDLV IRQSYAEV ATQKR +RQK +AD+LA  WY RAQLAL+ GD+ LAREAL+R+QQQV
Sbjct:   32 RPTTALQMNFFDRFKRVAEANINNVLGKMEDPEKVLNQAVEDLQKDLVTIRQSYAEVMATQKRQQRQKDQADQLADEWYRRAQLALEKGDDELAREALSRKQQQV 136

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A7S1D0V6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0V6_CYCTE)

HSP 1 Score: 138 bits (347), Expect = 1.300e-36
Identity = 71/102 (69.61%), Postives = 90/102 (88.24%), Query Frame = 0

Query:   78 TALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            TAL MN+ DRF RVAKAN+NN+L+ +EDPEKIL QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA  WY RAQLAL+ G+E+LAREAL+RRQQQ+
Sbjct:   54 TALNMNIFDRFSRVAKANINNILKNLEDPEKILNQALEDMQGDLVKVRQSYAEITATQRRLLKQKEQADSLAQDWYQRAQLALEKGNEDLAREALSRRQQQL 155

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: K0SI43_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SI43_THAOC)

HSP 1 Score: 137 bits (346), Expect = 1.300e-36
Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 0

Query:   74 RRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            R SST L MNL DRF RVAK+N+NN+L+ +EDPEKI+ QAVEDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD L   WY RAQLALQ G+E LA+EAL+RRQQQ+
Sbjct:   43 RPSSTVLSMNLFDRFSRVAKSNINNVLKSLEDPEKIMNQAVEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQM 148

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BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Match: A0A6V2AWV5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AWV5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.630e-36
Identity = 73/106 (68.87%), Postives = 90/106 (84.91%), Query Frame = 0

Query:   74 RRSSTALQMNLADRFLRVAKANLNNLLQGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLATSWYDRAQLALQNGDENLAREALARRQQQV 179
            R S+TAL MNL DRF RVAK+N+NN+L+ +EDPEKI+ QA+EDMQ DLVK+RQSYAE++ATQ+R+ +QK++AD LA  WY RAQLALQ  +E LAREAL RRQQQV
Sbjct:   44 RSSTTALSMNLFDRFSRVAKSNINNVLKSLEDPEKIMTQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALAQDWYQRAQLALQKENETLAREALNRRQQQV 149

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig10955.860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KE64_9PHAE	7.960e-70	78.89	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7TN53_9STRA	1.710e-42	80.20	Membrane-associated 30 kDa protein n=2 Tax=Monodop...	[more]
A0A836CIH9_9STRA	1.560e-41	80.81	PspA/IM30 family-domain-containing protein n=1 Tax...	[more]
A0A7S2XXS6_9STRA	8.950e-41	72.32	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S2H6D6_9STRA	4.960e-38	71.30	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A7S2A8X3_TRICV	8.570e-38	69.72	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A8J2SJN9_9STRA	8.870e-38	72.38	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S1D0V6_CYCTE	1.300e-36	69.61	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
K0SI43_THAOC	1.300e-36	67.92	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A6V2AWV5_9STRA	3.630e-36	68.87	Hypothetical protein n=3 Tax=Ditylum brightwellii ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..151
None	No IPR available	PANTHER	PTHR31088:SF6	MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC	coord: 69..177
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 33..179
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..32
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..22 score: 0.546
IPR007157	PspA/IM30	PFAM	PF04012	PspA_IM30	coord: 86..177 e-value: 1.2E-26 score: 93.6
IPR007157	PspA/IM30	PANTHER	PTHR31088	FAMILY NOT NAMED	coord: 69..177

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig10955	contig	L-elsbetiae_contig10955:2368..6298 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig10955.860.1	mRNA_L-elsbetiae_contig10955.860.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig10955 2359..6298 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig10955.860.1 ID=prot_L-elsbetiae_contig10955.860.1|Name=mRNA_L-elsbetiae_contig10955.860.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
MGSFRSTPVAAAAAALVLATSSVPSGVTFVDGFVVPPSASAIARSMQGAG
IASAQSPGPRAGAPWRGSSISSSRRSSTALQMNLADRFLRVAKANLNNLL
QGMEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMERQKQEADRLAT
SWYDRAQLALQNGDENLAREALARRQQQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007157	PspA_IM30