mRNA_L-elsbetiae_contig10887.810.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: A0A7T8KJ69_CALRO (Uncharacterized protein n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8KJ69_CALRO) HSP 1 Score: 62.4 bits (150), Expect = 6.160e-8 Identity = 49/169 (28.99%), Postives = 77/169 (45.56%), Query Frame = 1 Query: 97 VAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGLMQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 A + SN+L HL HK E V L +TP++ + +KY + G L +YIV+D+ PL TV+SP FR +++ + +P ++LP W+ K + ++ + + V T D W A N S F +T H+ D T + LAC Sbjct: 56 TARNSTSNLLKHLESIHKNEDLVATCLT--------NTPQTR--KRRKYSELNGEELK-----GLVSAYIVEDMLPLSTVDSPTFRAIIKKIPLSPSVKLPYRKAYTSWLDRKFTSMESALKSSLEGIEFVSTTADLWTANNKS--FLGVTVHWIDNITLKRRKGALAC 207
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: A0A672FF88_SALFA (BED-type domain-containing protein n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FF88_SALFA) HSP 1 Score: 62.0 bits (149), Expect = 8.340e-8 Identity = 50/188 (26.60%), Postives = 84/188 (44.68%), Query Frame = 1 Query: 43 KSTDPRSKMCLCGFYGKPVAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGLMQNPKLELPG-AYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 K+ R K+C G + + SN+ HL H V + + + E + P + +V L N S+IV+D+ P+ TVESP+FRN++R + + LP + T A ++ + E++ +++ R + V T D W N S F +T H+ DPD + +AC Sbjct: 74 KNVTVRCKLCP-GQKHLSTSVNSTSNLSKHLERQHGSTKLVSKNIRGEREDGTVTAPTPKQPRLNFQQPQVTTKAEL---NRLVASFIVEDMLPISTVESPSFRNILRRIPGSGSERLPSDSKTFANYLDQCYEKMETQLKQTFERLEFVSTTADIWTTCNKS--FLGMTCHWIDPDNFQREKAAIAC 255
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: UPI000DF3E743 (uncharacterized protein LOC109202836 n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=UPI000DF3E743) HSP 1 Score: 57.0 bits (136), Expect = 3.940e-6 Identity = 45/170 (26.47%), Postives = 79/170 (46.47%), Query Frame = 1 Query: 97 VAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGL-MQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 A + SN+L HL H++ L + + S+ D+T + + K +S Y+V+++ PLRTVESP+FR ++ + + K LP T + ++ + ++ ++E + + T + W + N S F +TAH+TDP T LAC Sbjct: 45 AAVNSTSNLLKHLTRQHRQS-----LLSEPSSSSMDNTAATPAKQTKLDFTSATQKVSEGELKKMIAGYVVEEMLPLRTVESPSFRCILNKIPVCVKKAALPDRKTFSTYLDKCYADMEMELKETFESLEYISTTANIWTSHNKS--FLRMTAHWTDPSTFVRGHAALAC 207
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: I3JNG5_ORENI (BED-type domain-containing protein n=5 Tax=Osteoglossocephalai TaxID=1489341 RepID=I3JNG5_ORENI) HSP 1 Score: 57.0 bits (136), Expect = 4.210e-6 Identity = 45/170 (26.47%), Postives = 79/170 (46.47%), Query Frame = 1 Query: 97 VAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGL-MQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 A + SN+L HL H++ L + + S+ D+T + + K +S Y+V+++ PLRTVESP+FR ++ + + K LP T + ++ + ++ ++E + + T + W + N S F +TAH+TDP T LAC Sbjct: 45 AAVNSTSNLLKHLTRQHRQS-----LLSEPSSSSMDNTAATPAKQTKLDFTSATQKVSEGELKKMIAGYVVEEMLPLRTVESPSFRCILNKIPVCVKKAALPDRKTFSTYLDKCYADMEMELKETFESLEYISTTANIWTSHNKS--FLRMTAHWTDPSTFVRGHAALAC 207
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: A0A672HL56_SALFA (Uncharacterized protein n=4 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HL56_SALFA) HSP 1 Score: 57.0 bits (136), Expect = 4.330e-6 Identity = 49/182 (26.92%), Postives = 81/182 (44.51%), Query Frame = 1 Query: 58 RSKMCLCGFYGKPVAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGLMQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRR-KQVCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 R +CL G AA + SN+L HL H V +A D D++P++ + R A N YIV+D++P+ TVESP FR ++ L+ ++ G T + ++ + ++ +++ + T D W N S F +TAH+ +P T + LAC Sbjct: 84 RCNLCL-GTKTLSAAANSNSNLLKHLGTQHATTKLVAKASGSDT-GTDDTSPRAPKQQRLSSFLRGSATAIQAKVNQVIAGYIVEDMQPISTVESPAFRRII-DLIPGATRQM-GRKTFSNYLESEYTKMESELKQTFEGLSYISTTADIWTGHNRS--FMGVTAHWINPATLQRQKAALAC 259
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: A0A8C1W1S9_CYPCA (Uncharacterized protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1W1S9_CYPCA) HSP 1 Score: 56.6 bits (135), Expect = 5.230e-6 Identity = 47/174 (27.01%), Postives = 80/174 (45.98%), Query Frame = 1 Query: 97 VAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTP---KSGGGEIKKYIKRVGAPLSLTAR--NSYYGSYIVKDLEPLRTVESPNFRNMVRGLMQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 + + SN++ HL H V A D + DS+P K G G K + + +T N GSY+VK + PL TVE +FR ++ + + + P + T A+++ + ++ +++ + + T D W A N S + +TAH+ DP + E LAC Sbjct: 13 TSVVSNSNLMKHLTTTHASTKLV--AKNTDTSTTDDSSPSTSKEGLGAQKLDLSALQQKPMMTQAEVNRMIGSYVVKSMLPLLTVEDDSFRAIIAKIPRKAGVCTPCSKTFAKYLDAEYAKMNTELKKSFEELEFLSTTADIWTAHNRS--YLGMTAHWLDPHSLEQKKAALAC 182
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: UPI00165C5B3A (uncharacterized protein LOC118560298 n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165C5B3A) HSP 1 Score: 55.5 bits (132), Expect = 1.380e-5 Identity = 49/191 (25.65%), Postives = 83/191 (43.46%), Query Frame = 1 Query: 37 FMKSTDPRSKMCLCGFYGKPVAATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGL--MQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 F++ D ++ + C KP +T N +L H ++ L + + A+D K ++ + + PL Y+V+D+ PL TVESP F+ +V + N K LP T A+ + + +++ I +Q V T D W A N S F +T H+ D +T + +AC Sbjct: 19 FVRDKDKKNVIVKCNLCVKPKELSTSRNSTSNLKKHLER-CHATTTLSEKRKIAEDERDKPKQQKLN-FSRPAIIPLEPREVRRLVAEYVVEDMLPLSTVESPAFKKLVSKIPVTTNDKHVLPCRTTFAKELDRTYTVMEKELKKTIDEQQYVSTTADIWTANNRS--FLGVTVHWIDSETLQRKKAAIAC 205
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: UPI001C2DF0C9 (uncharacterized protein LOC121812104 isoform X1 n=1 Tax=Haplochromis burtoni TaxID=8153 RepID=UPI001C2DF0C9) HSP 1 Score: 54.3 bits (129), Expect = 2.530e-5 Identity = 44/169 (26.04%), Postives = 77/169 (45.56%), Query Frame = 1 Query: 100 AATTPSNVLHHLNHHHKKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGAPLSLTARNSYYGSYIVKDLEPLRTVESPNFRNMVRGL-MQNPKLELPGAYTMAQWVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTDPDTAELVSCTLAC 600 A + SN+L HL H++ L + + S+ D+T + + K +S Y+V+++ PLRTVESP+FR ++ + + K L T + ++ + ++ ++E + + T D W + N S F +TAH+ DP T LAC Sbjct: 44 AVNSTSNLLKHLTRQHRQS-----LLSEPSSSSMDNTAATPAKQTKLDFTSATQKVSEGELKKMIAGYVVEEMLPLRTVESPSFRCILNKIPVCGKKAALHDRKTFSTYLDKCYADMEMELKETFESLEYISTTADIWTSHNKS--FLGMTAHWIDPSTFVRGHAALAC 205
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Match: A0A8B8ER91_CRAVI (zinc finger BED domain-containing protein 1-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ER91_CRAVI) HSP 1 Score: 52.8 bits (125), Expect = 8.310e-5 Identity = 52/190 (27.37%), Postives = 86/190 (45.26%), Query Frame = 1 Query: 28 WRFFMKSTDPRSKMCLCGFYGKPVAATTPSNVLHHLNHHH----KKEGRVKQALEDDAESAQDSTPKSGGGEIKKYIKRVGA-----PLSLTAR-NSYYGSYIVKDLEPLRTVESPNFRNMVRGLMQNPKLELPGAYTMAQ-WVSEKAEEVRDIIREKIRRKQ-VCLTGDGWDATNGSGAFYSLTAHFTD 561 W +F + ++K LC TT N++ HLN HH + E V D + Q + PK G +K + A PLS T + YI+ DL P T+ESP FR M+ L P+ + P +++ + E ++ + +++ + V LT DGW + + +F ++T HF + Sbjct: 9 WNYFCNEKNRQAKCNLCSAVVATSGGTT--NLIFHLNRHHNISLRSETTVTTRASGDV-AQQPTEPKCEPG-VKTNPWTLSASQRKLPLSRTNEITTAVLQYIIHDLRPFSTIESPVFRKMLSTL--EPRYQPPNRTRLSEELIPALYESIKSKLYAELQSSEAVSLTCDGW-TSRATQSFLTVTCHFVN 191 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10887.810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10887.810.1 >prot_L-elsbetiae_contig10887.810.1 ID=prot_L-elsbetiae_contig10887.810.1|Name=mRNA_L-elsbetiae_contig10887.810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp RNKRSKKWYWRFFMKSTDPRSKMCLCGFYGKPVAATTPSNVLHHLNHHHKback to top mRNA from alignment at L-elsbetiae_contig10887:6029..6628+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10887.810.1 ID=mRNA_L-elsbetiae_contig10887.810.1|Name=mRNA_L-elsbetiae_contig10887.810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=600bp|location=Sequence derived from alignment at L-elsbetiae_contig10887:6029..6628+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10887:6029..6628+ >mRNA_L-elsbetiae_contig10887.810.1 ID=mRNA_L-elsbetiae_contig10887.810.1|Name=mRNA_L-elsbetiae_contig10887.810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1200bp|location=Sequence derived from alignment at L-elsbetiae_contig10887:6029..6628+ (Laminarionema elsbetiae ELsaHSoW15)back to top |