prot_L-elsbetiae_contig1084.775.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1084.775.1
Unique Nameprot_L-elsbetiae_contig1084.775.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A6H5KSI2_9PHAE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI2_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 9.240e-48
Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 0 
Query:    1 MLRAGSRFARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            MLR+ SR   KL RATK  R+YHAT AAR+VVGGGAQ ASVNGGDITSKYQIIDHEYDAVVV AGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA
Sbjct:    1 MLRSSSRLGHKLVRATKGLRDYHATSAARVVVGGGAQEASVNGGDITSKYQIIDHEYDAVVVRAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A024GCU7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCU7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.510e-28
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0 
Query:   45 DITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            D+TSKY IIDHEYDAV+VGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA
Sbjct:   36 DLTSKYTIIDHEYDAVIVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 96
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A8H7UXE1_9FUNG (FAD_binding_2 domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UXE1_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 1.030e-27
Identity = 65/104 (62.50%), Postives = 70/104 (67.31%), Query Frame = 0 
Query:    2 LRAGSRFARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            L++ S  A + A     +R  H    A  V+      A    G I SKY IIDHEYDAVVVGAGGAGLRAA G AEAGL TACITKLFPTRSHTVAAQGGINAA
Sbjct:    5 LQSSSPKALRAANGRMAARGLHYAKPAMQVMSTNPLRAQEASGSIASKYPIIDHEYDAVVVGAGGAGLRAAFGLAEAGLNTACITKLFPTRSHTVAAQGGINAA 108
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A2P4YK26_9STRA (Succinate dehydrogenase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK26_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.120e-27
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0 
Query:   46 ITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            +TSKY ++DHEYDAVVVGAGGAGLRAAMGCAEAGLKTACI+KLFPTRSHTVAAQGGINAA
Sbjct:   40 LTSKYTVVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAA 99
[Close]
BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A7S0STC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STC0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.830e-27
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:   40 SVNG---GDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            SVNG    D+TSKY I+DH+YD VVVGAGGAGLRAAMGCAEAG KTAC+TKLFPTRSHTVAAQGGINAA
Sbjct:   25 SVNGKLANDLTSKYTIVDHDYDCVVVGAGGAGLRAAMGCAEAGFKTACVTKLFPTRSHTVAAQGGINAA 93
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: UPI000867A627 (succinate dehydrogenase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867A627)

HSP 1 Score: 113 bits (282), Expect = 5.580e-27
Identity = 60/86 (69.77%), Postives = 66/86 (76.74%), Query Frame = 0 
Query:   20 REYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            R +HAT     ++G     A    G I+SKY +IDHEYDA+VVGAGGAGLRAA G AEAGL TACITKLFPTRSHTVAAQGGINAA
Sbjct:   18 RAFHATRPGARIIGSQPLRAQEASGAISSKYPVIDHEYDAIVVGAGGAGLRAAFGLAEAGLNTACITKLFPTRSHTVAAQGGINAA 103
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A2D4C5W6_PYTIN (Succinate dehydrogenase flavoprotein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5W6_PYTIN)

HSP 1 Score: 108 bits (269), Expect = 5.880e-27
Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 0 
Query:   46 ITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            +TSKY ++DHEYD VVVGAGGAGLRAAMGCAEAG KTACI+KLFPTRSHTVAAQGGINAA
Sbjct:   36 LTSKYTVVDHEYDVVVVGAGGAGLRAAMGCAEAGFKTACISKLFPTRSHTVAAQGGINAA 95
[Close]
BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: A0A0E9NPU4_SAICN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NPU4_SAICN)

HSP 1 Score: 113 bits (282), Expect = 6.240e-27
Identity = 60/86 (69.77%), Postives = 66/86 (76.74%), Query Frame = 0 
Query:   20 REYHATPAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            R +HAT     ++G     A    G I+SKY +IDHEYDA+VVGAGGAGLRAA G AEAGL TACITKLFPTRSHTVAAQGGINAA
Sbjct:  556 RAFHATRPGARIIGSQPLRAQEASGAISSKYPVIDHEYDAIVVGAGGAGLRAAFGLAEAGLNTACITKLFPTRSHTVAAQGGINAA 641
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BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: G0SCP6_CHATD (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=7 Tax=Sordariales TaxID=5139 RepID=G0SCP6_CHATD)

HSP 1 Score: 112 bits (281), Expect = 7.730e-27
Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = 0 
Query:   12 LARATKPS-REYHAT-PAARMVVGGGAQNASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            LARA +PS R +  T PAAR++V  G   A      +++KY +IDHEYDAVV+GAGGAGLRAA G AEAG  TACI+KLFPTRSHTVAAQGGINAA
Sbjct:   16 LARAARPSVRAFSTTRPAARVIVPNGVLRAKEASPHVSNKYAVIDHEYDAVVIGAGGAGLRAAFGLAEAGFNTACISKLFPTRSHTVAAQGGINAA 111
[Close]
BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Match: H3GIQ9_PHYRM (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3GIQ9_PHYRM)

HSP 1 Score: 112 bits (280), Expect = 1.050e-26
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0 
Query:   39 ASVNGGDITSKYQIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQGGINAA 105
            A V    +TSKY I+DHEYDAVVVGAGGAGLRAAMGCAEAGLKTACI+KLFPTRSHTVAAQGGINAA
Sbjct:   33 AGVESTALTSKYTIVDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAA 99
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1084.775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI2_9PHAE9.240e-4887.62Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A024GCU7_9STRA8.510e-2895.08Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
A0A8H7UXE1_9FUNG1.030e-2762.50FAD_binding_2 domain-containing protein n=1 Tax=Mu... [more]
A0A2P4YK26_9STRA1.120e-2791.67Succinate dehydrogenase (Fragment) n=1 Tax=Phytoph... [more]
A0A7S0STC0_9STRA1.830e-2784.06Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
UPI000867A6275.580e-2769.77succinate dehydrogenase n=1 Tax=Saitoella complica... [more]
A0A2D4C5W6_PYTIN5.880e-2788.33Succinate dehydrogenase flavoprotein n=1 Tax=Pythi... [more]
A0A0E9NPU4_SAICN6.240e-2769.77Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
G0SCP6_CHATD7.730e-2766.67Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]
H3GIQ9_PHYRM1.050e-2686.57Succinate dehydrogenase [ubiquinone] flavoprotein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 38..105
e-value: 4.1E-22
score: 80.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 49..104
IPR003953FAD-dependent oxidoreductase 2, FAD binding domainPFAMPF00890FAD_binding_2coord: 58..105
e-value: 2.7E-15
score: 56.4
NoneNo IPR availablePANTHERPTHR11632:SF51SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIALcoord: 44..105
NoneNo IPR availablePANTHERPTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITcoord: 44..105
IPR003952Fumarate reductase/succinate dehydrogenase, FAD-binding sitePROSITEPS00504FRD_SDH_FAD_BINDINGcoord: 92..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1084contigL-elsbetiae_contig1084:3067..6175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1084.775.1mRNA_L-elsbetiae_contig1084.775.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1084 3067..6311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1084.775.1 ID=prot_L-elsbetiae_contig1084.775.1|Name=mRNA_L-elsbetiae_contig1084.775.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
MLRAGSRFARKLARATKPSREYHATPAARMVVGGGAQNASVNGGDITSKY
QIIDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACITKLFPTRSHTVAAQG
GINAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR003953FAD-binding_2
IPR003952FRD_SDH_FAD_BS