mRNA_L-elsbetiae_contig10785.729.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI) HSP 1 Score: 287 bits (735), Expect = 3.350e-97 Identity = 139/150 (92.67%), Postives = 147/150 (98.00%), Query Frame = 2 Query: 125 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRE 574 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKH+VQ+TPMPCELTA+TDRSFTFKLSTPQTTWMLKRCAG+EKGGSRAGHEY GK+GLKALYEIAKVKNAE HS+LLPLESVCKSVRATALSMGLEIVDDR SLK++ Sbjct: 1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQK 150
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A835Z8X1_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.450e-56 Identity = 91/151 (60.26%), Postives = 114/151 (75.50%), Query Frame = 2 Query: 125 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRED 577 MS VRTVRMRVPAG AKPGPAIGQALGPLGINMM+FCK FN +T+H++ TP P L+AF++R+F F + TP T+W+LKRCA I+KG G E G +G KA+YEIAK+K + H LPL+ + +SV +TALSMGL+I DD +K ED Sbjct: 1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDD---MKAED 148
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.860e-53 Identity = 83/145 (57.24%), Postives = 109/145 (75.17%), Query Frame = 2 Query: 122 QMSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDR 556 +MS VRTVR+RVPAG AKPGPAIGQALGPLGINMMEFCK FN+ T +V+ TP+P LTA+ +R+FTF +P TTW LK AG+EKG +R GHE G++ LK ++EIAK+K + H +PL +C+S+ TA SMG+ ++ D+ Sbjct: 11 KMSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2STT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA) HSP 1 Score: 172 bits (436), Expect = 8.930e-52 Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 2 Query: 137 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDR 556 R V++RVPAG+AKPGPAIGQALGPLGINMMEFCK FN+ T+ + +TP+P LTA T+R+FTF +P T+W LKRCAGI+KG R GH G + ++ +YEIAK K + H L L+S+C+S+ A+A SMG+++ +DR Sbjct: 6 RIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A6V2RJT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK) HSP 1 Score: 165 bits (418), Expect = 5.260e-49 Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 2 Query: 137 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNS 562 R V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK + P P +L+A+ DRSF F +P T+W LKRCAGI+KG R G+E +G + LK +YEI K + H LP E++ +S+ +A SMGL++VDDR + Sbjct: 7 RVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDRET 148
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S1BAR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA) HSP 1 Score: 164 bits (416), Expect = 9.930e-49 Identity = 81/151 (53.64%), Postives = 110/151 (72.85%), Query Frame = 2 Query: 125 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYS-GKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRE 574 MS+VR+V +RVPA A+PGPAIGQALGPLG+NM EFCK+FNE T V S +P L AF DR+F F + +P T+ M+KR AG+EKG R G + + G I ++A+YEIAK+K +TH +P+ SV KS+ TALSMG+E++DD+ ++ E Sbjct: 1 MSYVRSVLLRVPAAAARPGPAIGQALGPLGVNMAEFCKQFNERTAGYVSSWTLPVRLDAFADRTFEFHVRSPPTSHMIKRAAGLEKGAGRPGAQSAVGSIRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDKGNVVAE 151
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7R9UAQ2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.200e-48 Identity = 80/156 (51.28%), Postives = 107/156 (68.59%), Query Frame = 2 Query: 119 RQMSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKREDNDL 586 R R V++ VPAG AKPGPAIGQ+LGPLG+NM EFCK FN +T Q+ P+P L A+ DRSF L +P+T+W LK+CAGIEKG ++ G+E G + LK +Y IAK+K + H L PL+S+C+SV +A S+GLE+VDDR + + L Sbjct: 51 RAKKLKRLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQQSQASEEPL 206
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S1C344_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C344_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.900e-45 Identity = 75/135 (55.56%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 146 RMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNA-ETHSLLLPLESVCKSVRATALSMGLEIV 547 RMRV AG AKP PAIGQALGPLG+NMMEFCK FN+ T +V TPM LTAF DR+FTF + +P +W LKR AG++KG + GH+ GK+GL+A+YEIA +K + H LP+ ++ ++V ATA SMG+++V Sbjct: 9 RMRVLAGAAKPSPAIGQALGPLGVNMMEFCKSFNDRTGALVSETPMRVHLTAFQDRTFTFDVLSPDVSWFLKRAAGVDKGATSPGHDSPGKVGLRAVYEIAALKQRHDDHLSALPMPALVRNVCATAKSMGIKVV 143
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2RUG3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUG3_9STRA) HSP 1 Score: 154 bits (389), Expect = 9.840e-45 Identity = 69/135 (51.11%), Postives = 102/135 (75.56%), Query Frame = 2 Query: 140 TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEI 544 T R+ VPAG AKP PAIGQALGPLG+NMM+FCK FN +T++ + P+P +LTA+ DR+F F + TP T+W++K+ +GIEKG S G E G + +KA+YEIAK+K ++ + +PL+S+CK+V ++ SMG+++ Sbjct: 8 TCRLLVPAGAAKPSPAIGQALGPLGVNMMDFCKGFNAQTENFQPNIPLPVKLTAYGDRTFKFDVKTPHTSWLIKKASGIEKGSSTPGSEIVGTLSVKAVYEIAKLKQSDPNLASIPLKSLCKTVMSSCKSMGIKV 142
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: F0W615_9STRA (50S ribosomal protein L11 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W615_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.720e-44 Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 143 VRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEI 544 VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T H++ P P LTA DR+F F++ TP TTW LK+CAGI + G + G I L+ +YEIAK+K + + + L S+CKS+ +A SMGL+I Sbjct: 8 VRLRVAAGKASPSPAIGQALGPLGVNMMEFCKSFNERTSHLIAEVPTPVTLTALADRTFEFQIKTPPTTWFLKKCAGITSASATPGEVFVGNIKLRHIYEIAKIKQTDENLDFMELPSLCKSIIGSAKSMGLKI 141 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10785.729.1 >prot_L-elsbetiae_contig10785.729.1 ID=prot_L-elsbetiae_contig10785.729.1|Name=mRNA_L-elsbetiae_contig10785.729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSback to top mRNA from alignment at L-elsbetiae_contig10785:1304..4227- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10785.729.1 ID=mRNA_L-elsbetiae_contig10785.729.1|Name=mRNA_L-elsbetiae_contig10785.729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2924bp|location=Sequence derived from alignment at L-elsbetiae_contig10785:1304..4227- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10785:1304..4227- >mRNA_L-elsbetiae_contig10785.729.1 ID=mRNA_L-elsbetiae_contig10785.729.1|Name=mRNA_L-elsbetiae_contig10785.729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig10785:1304..4227- (Laminarionema elsbetiae ELsaHSoW15)back to top |