prot_L-elsbetiae_contig10785.729.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10785.729.1
Unique Nameprot_L-elsbetiae_contig10785.729.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 6.470e-98
Identity = 139/150 (92.67%), Postives = 147/150 (98.00%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRE 150
            MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKH+VQ+TPMPCELTA+TDRSFTFKLSTPQTTWMLKRCAG+EKGGSRAGHEY GK+GLKALYEIAKVKNAE HS+LLPLESVCKSVRATALSMGLEIVDDR SLK++
Sbjct:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQK 150          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A835Z8X1_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 7.420e-57
Identity = 91/151 (60.26%), Postives = 114/151 (75.50%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRED 151
            MS VRTVRMRVPAG AKPGPAIGQALGPLGINMM+FCK FN +T+H++  TP P  L+AF++R+F F + TP T+W+LKRCA I+KG    G E  G +G KA+YEIAK+K  + H   LPL+ + +SV +TALSMGL+I DD   +K ED
Sbjct:    1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDD---MKAED 148          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA)

HSP 1 Score: 177 bits (449), Expect = 8.820e-54
Identity = 83/144 (57.64%), Postives = 108/144 (75.00%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDR 144
            MS VRTVR+RVPAG AKPGPAIGQALGPLGINMMEFCK FN+ T  +V+ TP+P  LTA+ +R+FTF   +P TTW LK  AG+EKG +R GHE  G++ LK ++EIAK+K  + H   +PL  +C+S+  TA SMG+ ++ D+
Sbjct:   12 MSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2STT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.960e-52
Identity = 79/140 (56.43%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDR 144
            R V++RVPAG+AKPGPAIGQALGPLGINMMEFCK FN+ T+ +  +TP+P  LTA T+R+FTF   +P T+W LKRCAGI+KG  R GH   G + ++ +YEIAK K  + H   L L+S+C+S+ A+A SMG+++ +DR
Sbjct:    6 RIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A6V2RJT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK)

HSP 1 Score: 165 bits (418), Expect = 1.170e-49
Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNS 146
            R V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK +    P P +L+A+ DRSF F   +P T+W LKRCAGI+KG  R G+E +G + LK +YEI   K  + H   LP E++ +S+  +A SMGL++VDDR +
Sbjct:    7 RVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDRET 148          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S1BAR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.220e-49
Identity = 81/151 (53.64%), Postives = 110/151 (72.85%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYS-GKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRE 150
            MS+VR+V +RVPA  A+PGPAIGQALGPLG+NM EFCK+FNE T   V S  +P  L AF DR+F F + +P T+ M+KR AG+EKG  R G + + G I ++A+YEIAK+K  +TH   +P+ SV KS+  TALSMG+E++DD+ ++  E
Sbjct:    1 MSYVRSVLLRVPAAAARPGPAIGQALGPLGVNMAEFCKQFNERTAGYVSSWTLPVRLDAFADRTFEFHVRSPPTSHMIKRAAGLEKGAGRPGAQSAVGSIRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDKGNVVAE 151          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7R9UAQ2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.790e-49
Identity = 79/150 (52.67%), Postives = 106/150 (70.67%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKREDNDL 154
            R V++ VPAG AKPGPAIGQ+LGPLG+NM EFCK FN +T    Q+ P+P  L A+ DRSF   L +P+T+W LK+CAGIEKG ++ G+E  G + LK +Y IAK+K  + H  L PL+S+C+SV  +A S+GLE+VDDR   +  +  L
Sbjct:   57 RLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQQSQASEEPL 206          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S1C344_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C344_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.120e-45
Identity = 75/135 (55.56%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    8 RMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNA-ETHSLLLPLESVCKSVRATALSMGLEIV 141
            RMRV AG AKP PAIGQALGPLG+NMMEFCK FN+ T  +V  TPM   LTAF DR+FTF + +P  +W LKR AG++KG +  GH+  GK+GL+A+YEIA +K   + H   LP+ ++ ++V ATA SMG+++V
Sbjct:    9 RMRVLAGAAKPSPAIGQALGPLGVNMMEFCKSFNDRTGALVSETPMRVHLTAFQDRTFTFDVLSPDVSWFLKRAAGVDKGATSPGHDSPGKVGLRAVYEIAALKQRHDDHLSALPMPALVRNVCATAKSMGIKVV 143          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: A0A7S2RUG3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUG3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.250e-45
Identity = 69/135 (51.11%), Postives = 102/135 (75.56%), Query Frame = 0
Query:    6 TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEI 140
            T R+ VPAG AKP PAIGQALGPLG+NMM+FCK FN +T++   + P+P +LTA+ DR+F F + TP T+W++K+ +GIEKG S  G E  G + +KA+YEIAK+K ++ +   +PL+S+CK+V ++  SMG+++
Sbjct:    8 TCRLLVPAGAAKPSPAIGQALGPLGVNMMDFCKGFNAQTENFQPNIPLPVKLTAYGDRTFKFDVKTPHTSWLIKKASGIEKGSSTPGSEIVGTLSVKAVYEIAKLKQSDPNLASIPLKSLCKTVMSSCKSMGIKV 142          
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Match: F0W615_9STRA (50S ribosomal protein L11 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W615_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.220e-45
Identity = 72/134 (53.73%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    7 VRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQSTPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIGLKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEI 140
            VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T H++   P P  LTA  DR+F F++ TP TTW LK+CAGI    +  G  + G I L+ +YEIAK+K  + +   + L S+CKS+  +A SMGL+I
Sbjct:    8 VRLRVAAGKASPSPAIGQALGPLGVNMMEFCKSFNERTSHLIAEVPTPVTLTALADRTFEFQIKTPPTTWFLKKCAGITSASATPGEVFVGNIKLRHIYEIAKIKQTDENLDFMELPSLCKSIIGSAKSMGLKI 141          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10785.729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX78_ECTSI6.470e-9892.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8X1_9STRA7.420e-5760.26Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2CHZ2_9STRA8.820e-5457.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2STT6_9STRA1.960e-5256.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2RJT6_HETAK1.170e-4955.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1BAR1_9STRA2.220e-4953.64Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9UAQ2_9STRA3.790e-4952.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1C344_9STRA1.120e-4555.56Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2RUG3_9STRA2.250e-4551.11Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
F0W615_9STRA6.220e-4553.7350S ribosomal protein L11 putative n=2 Tax=Albugo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 7..141
e-value: 1.1E-53
score: 194.3
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..142
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 3..142
score: 22.993
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 4..142
e-value: 1.9E-43
score: 145.7
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 71..140
e-value: 5.8E-20
score: 71.6
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 4..65
e-value: 1.6E-25
score: 88.7
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 69..141
e-value: 5.5E-25
score: 89.2
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 66..140
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..68
e-value: 1.2E-27
score: 97.4
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 4..70
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..142
NoneNo IPR availablePRODOMPD001367coord: 34..72
e-value: 2.0E-7
score: 128.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10785contigL-elsbetiae_contig10785:1304..4103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10785.729.1mRNA_L-elsbetiae_contig10785.729.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10785 1304..4227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10785.729.1 ID=prot_L-elsbetiae_contig10785.729.1|Name=mRNA_L-elsbetiae_contig10785.729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQS
TPMPCELTAFTDRSFTFKLSTPQTTWMLKRCAGIEKGGSRAGHEYSGKIG
LKALYEIAKVKNAETHSLLLPLESVCKSVRATALSMGLEIVDDRNSLKRE
DNDL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR006519Ribosomal_L11_bac-typ
IPR020783Ribosomal_L11_C
IPR020784Ribosomal_L11_N
IPR036769Ribosomal_L11_C_sf
IPR036796Ribosomal_L11/L12_N_sf