mRNA_L-elsbetiae_contig1076.701.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1076.701.1
Unique NamemRNA_L-elsbetiae_contig1076.701.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Match: D8LNS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS0_ECTSI)

HSP 1 Score: 577 bits (1487), Expect = 3.310e-197
Identity = 352/510 (69.02%), Postives = 401/510 (78.63%), Query Frame = 2 
Query:  134 MAD-VGSTSSGTAKPRLGPRSKI-VIPEAFTKAASNGRAISLAPASERTSQEKGLPPVAEPAAAVVAEVATPAVAVEAAVSPKTESPKPKPTFEPISPGLSSVKLPLGPSPKNESQAPPEDVKPKEEPPPEAKVGDIVELFMGRGQVRGVREEDGMLEVWAMGWEMAGEQRPRFFVSRGAVKVVPTVYYKMPVLERLQIAAWLKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQNARALEVMIPCHNNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGETTILGQWWCKGLFLGGKACLYQGENEEAVNCLRKGSKLAKPAVLAKLRAEINNELEKATKRLASQTKKAQKMWTKAFSKNSTDAAPEDNTTSASASAAGKRALPAAPTQRTAMNGGGGGPHKTVLERLEELTKMGGVSATPGATKAA-KQEKXXXXXXXXXXXXXXXXXXXXGDEHSLSVASSGLLWGSIAVGAVAVSVAALLALGKRR 1654
            M+D V S+SS    P LGP+SKI ++P+A   +  NG   S+   +  +S   G+  ++ PA A  AEVA  A       + KT+S K    F PISPGLSSVKLPLGPSPK E++    + K +EEPP EAKVGD+VELFMGRGQVRG+R+EDGMLEVWA+GWEMAGEQR RFFV R  VKVVPTVYYKM  LERLQ+AAWLK EGAKLFKAG +EKAA  YMKSIGVLKT EF +N+QNARA+++MIPCHNNAATCYIK+KNYGD+RLL+ENVDTLCSAL+RNR GKVMK LKERGVGETTILGQWWCKGLFLGGKACLYQ ENEEAVN L+KGS+LAKPA LAKLRAEINNELEKATKRLASQTKKAQKMW+KAFSKNSTD APE     A   AA KRALP+ PT+  AM+G  GGP K+V+ERLE L KMG V A P  +K   KQ++      XXXXXXXXXXXXXX    S S+ASSGLLWGS+AVGAVA+SVA L+ALGKRR
Sbjct:    1 MSDNVSSSSSAAGAPELGPQSKIAIVPDASAGSNPNGNGHSVVEKAH-SSPANGVE-ISPPAPAPPAEVAVVA-------ANKTDSSKL--AFNPISPGLSSVKLPLGPSPKEEAKTASPEKKEEEEPPVEAKVGDLVELFMGRGQVRGIRQEDGMLEVWAVGWEMAGEQRARFFVPRETVKVVPTVYYKMNALERLQMAAWLKEEGAKLFKAGDFEKAATKYMKSIGVLKTGEFTTNAQNARAVQLMIPCHNNAATCYIKRKNYGDARLLTENVDTLCSALERNRDGKVMKELKERGVGETTILGQWWCKGLFLGGKACLYQSENEEAVNYLKKGSRLAKPAALAKLRAEINNELEKATKRLASQTKKAQKMWSKAFSKNSTDVAPEQEGVPA---AAEKRALPSMPTR--AMDGRNGGPEKSVVERLEALAKMGVVPAIPEPSKTTPKQDEEQGEEGXXXXXXXXXXXXXXXXXXSGSLASSGLLWGSLAVGAVALSVATLVALGKRR 494
[Close]
BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Match: A0A7S2KRW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRW4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.520e-13
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 2 
Query:  533 DIVELFMGRGQVRGVREE----DGMLEVWAMGWEMAGEQRPRFFVSRGAVK-----------VVPTVYYKMPVLERLQIAAWLKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQN---ARALEVMIPCHNNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGETTILGQWWCKGLFL 1072
            D+V   +GRG V  VR      D +  V    W +AG  R R +    +             V     ++M + E+++ A   K E    F  G+Y++A   + +++  ++  +   +S N   A  +E+MI C NNAA+CY+K+K + D++  + N   +  AL+  RG K+   L++ G+ +  + G+W  K + +
Sbjct:   74 DVVIDGVGRGVVEDVRRNSNSGDDIAVVLLNTWRLAGRSRVRIYTPLSSFSKGNHADVTYHVVRKKRLFEMDIFEKIEYAKAKKQEAIPHFVQGRYDEALSLFSEAVHAVRMQQHSPDSSNEMRADLVEIMITCSNNAASCYVKKKEWKDAQQQARNALLIIDALEGKRGMKIHTILRQGGLTDLKMFGEWRIKSMLI 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNS0_ECTSI3.310e-19769.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KRW4_9STRA2.520e-1326.26Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1076contigL-elsbetiae_contig1076:455..9852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score584.7
Seed ortholog evalue4.1e-164
Seed eggNOG ortholog2880.D8LNS0
Hectar predicted targeting categoryother localisation
EggNOG OGs2E2VZ@1,2SA27@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionFKBP and TPR domain protein
Ec32 orthologEc-08_006070.1
Exons8
Model size2307
Cds size1524
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1076.701.1prot_L-elsbetiae_contig1076.701.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1076 1105..9719 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815293.1821363-UTR-L-elsbetiae_contig1076:454..11041622815293.1821363-UTR-L-elsbetiae_contig1076:454..1104Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1076 455..1104 -
1691682821.998919-UTR-L-elsbetiae_contig1076:454..11041691682821.998919-UTR-L-elsbetiae_contig1076:454..1104Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1076 455..1104 -
1622815293.2774382-UTR-L-elsbetiae_contig1076:9719..98521622815293.2774382-UTR-L-elsbetiae_contig1076:9719..9852Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1076 9720..9852 -
1691682822.0830772-UTR-L-elsbetiae_contig1076:9719..98521691682822.0830772-UTR-L-elsbetiae_contig1076:9719..9852Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1076 9720..9852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815293.1952617-CDS-L-elsbetiae_contig1076:1104..13321622815293.1952617-CDS-L-elsbetiae_contig1076:1104..1332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 1105..1332 -
1691682822.0094373-CDS-L-elsbetiae_contig1076:1104..13321691682822.0094373-CDS-L-elsbetiae_contig1076:1104..1332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 1105..1332 -
1622815293.2088933-CDS-L-elsbetiae_contig1076:2234..24081622815293.2088933-CDS-L-elsbetiae_contig1076:2234..2408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 2235..2408 -
1691682822.0194838-CDS-L-elsbetiae_contig1076:2234..24081691682822.0194838-CDS-L-elsbetiae_contig1076:2234..2408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 2235..2408 -
1622815293.2181304-CDS-L-elsbetiae_contig1076:2819..29331622815293.2181304-CDS-L-elsbetiae_contig1076:2819..2933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 2820..2933 -
1691682822.0283544-CDS-L-elsbetiae_contig1076:2819..29331691682822.0283544-CDS-L-elsbetiae_contig1076:2819..2933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 2820..2933 -
1622815293.227597-CDS-L-elsbetiae_contig1076:4671..48631622815293.227597-CDS-L-elsbetiae_contig1076:4671..4863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 4672..4863 -
1691682822.0370111-CDS-L-elsbetiae_contig1076:4671..48631691682822.0370111-CDS-L-elsbetiae_contig1076:4671..4863Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 4672..4863 -
1622815293.237103-CDS-L-elsbetiae_contig1076:5768..59251622815293.237103-CDS-L-elsbetiae_contig1076:5768..5925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 5769..5925 -
1691682822.0450468-CDS-L-elsbetiae_contig1076:5768..59251691682822.0450468-CDS-L-elsbetiae_contig1076:5768..5925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 5769..5925 -
1622815293.247939-CDS-L-elsbetiae_contig1076:6757..68451622815293.247939-CDS-L-elsbetiae_contig1076:6757..6845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 6758..6845 -
1691682822.0557714-CDS-L-elsbetiae_contig1076:6757..68451691682822.0557714-CDS-L-elsbetiae_contig1076:6757..6845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 6758..6845 -
1622815293.259234-CDS-L-elsbetiae_contig1076:7985..82171622815293.259234-CDS-L-elsbetiae_contig1076:7985..8217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 7986..8217 -
1691682822.063503-CDS-L-elsbetiae_contig1076:7985..82171691682822.063503-CDS-L-elsbetiae_contig1076:7985..8217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 7986..8217 -
1622815293.268515-CDS-L-elsbetiae_contig1076:9380..97191622815293.268515-CDS-L-elsbetiae_contig1076:9380..9719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 9381..9719 -
1691682822.0737054-CDS-L-elsbetiae_contig1076:9380..97191691682822.0737054-CDS-L-elsbetiae_contig1076:9380..9719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1076 9381..9719 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1076.701.1

>prot_L-elsbetiae_contig1076.701.1 ID=prot_L-elsbetiae_contig1076.701.1|Name=mRNA_L-elsbetiae_contig1076.701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=508bp
MADVGSTSSGTAKPRLGPRSKIVIPEAFTKAASNGRAISLAPASERTSQE
KGLPPVAEPAAAVVAEVATPAVAVEAAVSPKTESPKPKPTFEPISPGLSS
VKLPLGPSPKNESQAPPEDVKPKEEPPPEAKVGDIVELFMGRGQVRGVRE
EDGMLEVWAMGWEMAGEQRPRFFVSRGAVKVVPTVYYKMPVLERLQIAAW
LKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQNARALEVMIPCH
NNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGET
TILGQWWCKGLFLGGKACLYQGENEEAVNCLRKGSKLAKPAVLAKLRAEI
NNELEKATKRLASQTKKAQKMWTKAFSKNSTDAAPEDNTTSASASAAGKR
ALPAAPTQRTAMNGGGGGPHKTVLERLEELTKMGGVSATPGATKAAKQEK
SEEEEDESEEEDSEEEYDDEGDEHSLSVASSGLLWGSIAVGAVAVSVAAL
LALGKRR*
back to top

mRNA from alignment at L-elsbetiae_contig1076:455..9852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1076.701.1 ID=mRNA_L-elsbetiae_contig1076.701.1|Name=mRNA_L-elsbetiae_contig1076.701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9398bp|location=Sequence derived from alignment at L-elsbetiae_contig1076:455..9852- (Laminarionema elsbetiae ELsaHSoW15)
GCGACGAGCAAGGCTACTTCAGAATTTATCTAAGGTGTGCTCAGACCTAG
ATTGGCAACCTGAACTCGCAAGAGAGATTCAACAAGGGCGCCTAAACTAG
CGGAGCGATTCAAGAGTCCCCACAGCACCGACGATGGCTGATGTTGGCAG
CACTAGCAGCGGTACCGCGAAGCCGAGGCTAGGGCCTCGCAGCAAGATCG
TTATCCCGGAGGCCTTCACGAAGGCGGCCTCCAATGGACGCGCCATTAGC
CTCGCTCCCGCTTCGGAACGGACCAGCCAAGAGAAGGGCTTGCCTCCAGT
GGCAGAGCCGGCTGCAGCGGTGGTCGCGGAGGTAGCAACACCAGCTGTGG
CCGTGGAGGCAGCGGTCTCTCCCAAGACGGAATCACCAAAGCCAAAGCCA
ACGTTCGAACCCATCAGCCCCGGATTGAGCAGCGTCAAGCTTCCGCTAGG
GCCTTCACCCAAGAACGAATCGGTGAGCGGGTTTAAAAAGTGCTACATAC
AAGCCGACGATGCACGATGCGGCGTGGACAACACAGTGCGGTCCCACTTA
CTTGCTTTTGTGTGTGCAGTTTCGCGGCGTATTGGGATGACGGGGCGGTT
TTGGGGGTTTGCGCATGTTCATCCATTCATCATCCACCCCGGCTTGTGGT
TTGATACTTTCTCTTGTCGCGCGGGTTAAACACCCGGCGATCTATTTAGA
CTAAAGACCATCTCCGTATTTTAGTTACATTGACCGAGCTACGCTTGTAT
TGCAGCTCCTATGCATGTATTGTACATAGGAGACAGTAGAATATTAGTCA
TGTAGAAGTACTACACAAGTGGACTGCTGTGCACTTTTATGTAAAAAAAA
ATCAATCTACGGGTCCTCTCTCGTGTCCAGTCTACCGCTGTGGTCTAGAG
CCGACGGGTGCCGCTCACTCAAATGCGGCTATGTATCTAGAGTTTAGAAT
GCATGCATATGTAGCTCAGGCTCCACGACGAGAAAGCACACCGCGGTAAA
TAAGCCGAGCTCTTGAGACCCGGTGAGACCTTCGGTGACTCGCCACAAAA
GCCGACGAAGCCACAAGGACGCAGATCCGTCGTCTTTATCTCGCGAGTGT
CAGAGCCTCAGCGGCGGTGGTGGTGCACTATTTGCTGGCGTGCTGTGTGT
AGGCGCACAGACAGCAGTATCTTTTATTGAGAGTAAATAGCTTGAACGCG
TACGTACGGCCAAACGCAAGATACCGAAGGCGGGTGGTGTGGTTAGGCGA
ACTCGTGTGTCGGCGCACTTTTTTGGTACCGCCGAACGCCATGTGGGGCA
CAACAGAGTATACAAAGCAGCGGGAAGGGTACCGCCCTTCCGAAACCACT
GCCATACGTATATACAATTTTTACGTTGTCACTTCTGCGGGCCTCGGTTG
GGCGTAGTTGGGCGTAGTATGTAGACACAATCTACCCGGCACAGTACATA
GAGGGCAAAGGCTAAGGCTTATGTATGTAGGCAATGAACGAGAGAAAAAG
TGAAAAGTGTTTTTCTACCCTATAGTCTAGCCCCTTAAATGGCTACGGCT
CTTCCATGTACCTACATTGATCGCTCTGACGTTGTTCCTTATTCTTTATT
CCGCTCTGTGGGGCCCCTGTGTCCTTGCCGACGAGCAGGCGCCGCCGGAA
GACGTCAAGCCCAAAGAGGAGCCGCCCCCGGAGGCCAAAGTCGGTGATAT
CGTGGAGCTGTTCATGGGCAGAGGACAGGTCCGTGGCGTCCGGGAGGAGG
ATGGCATGCTGGAGGTGTGGGCGATGGGCTGGGAGATGGCGGGGGAGCAG
CGGCCTCGCTTCTTCGTGTCGAGGGGCGCCGTGAAGGTGGTCCCGACCGT
GTACTACAAGATGCCCGGTGAGTCGGCTTTTTTTCGTTTTCATTTTCTGC
TCGCTGTTTGTTGTTTGTTTCGTTTTTTTGCTGCTCGTTGTTTGTTTGTT
TGTTTGTTTGTTGTGATGCGACCTTTTTCAGGTCTCGCGGAGTGCGAAAA
GTGGTGCACGGAGTTTACCAACTTGGATGGGGTATTGCAGAGTGTAGTCA
TAAGAAAAAGTGCTGTTTTTTTGTTTTTTCTTCTGTAATTGGCTTATTCG
TCGTCTGCCCCACCGACCCCCTTCTCCACTACGACTACATAGCTAGGCGA
CCCAACCGGGGTCACACAGGAGGCTGCATACGACGGTGTGATTGATGTGT
GTGGTGGGTTCGGGAGTGGGGGTGTTGCTGTGTGCGCGGGGGCTCCGTGC
GCGGACGCCGATCAGGTTTGGATAGAGCTTGATCTTTGTATTATTCGAAG
GGGGTGATGCAAGTTCCCCGCAGGAGTACTGCGTTTTGTTTCGAGGGAAT
ATGGCGCTCGGCAGAGGTGCTGCTTGGGCGGGGAGTATGCATGTGTGGGG
TGCGTTTGCGGCTGTTCTGGCGCTCAAGCCTCAAAATGGCACCTAACGAG
GTGCGCACGGCTCCTGTCAAAGAGTAGAGCGTAGTGTGTGCTGCGCCGTG
ATTTTTCTTGTGGTAGGGCTCAGCTGGCAGCAGAATGCTCGGGGTCCGGT
GTGTCAACCTCGGGTGTCACTTGCTTGTAGGTACGGATGGTTCGAACTTG
GTGTAGAAATGATCGCATCGTCGTATCGGAGCAAGGTACAAAACACTGCC
GTTGGAAGGACAGACCTTATGTACATACCACCCTGCATCTACCGAAGGAC
GGACAAGAGGGTAGGTAGGTGCTGCTCCGTATTCCTCCGCATCACGGTGG
TGCTTACGCGGCCCTTGTCTTTCTTGAGCTTGAGTTGCTCTCTCTCCATT
GCCTCCGTCTCCTCTTTCGCTTGAAAAAGTTTATTTTTTATTTTTTAGTA
ACTTGGTTTGCTTTGGTTCGCTTTGGTTCGCATTGCTGCTGCTGCTGCTG
CTACTGCTGCTGCTGCTGCCACCGTTGCCCCTGCTGCCACTGCTGCTGCA
ACCTCATCTCGCCCCGGCATATGCCCGTTCCCCGTTTGCTGAATCCCGTT
ATGTCAGTACTGGAGCGACTCCAGATCGCGGCGTGGCTGAAGAGCGAGGG
GGCGAAACTGTTCAAGGCCGGCAAGTACGAGAAGGCCGCTCAAAAGTAAG
CCTTGAACAGTCGGTTGTGCGTTCGGGTTTGCGATATACCACAGTAGTTA
CAAATAAAGATTATTTATGTGCTTGATGGTTTACTAAATAACTTGTTGAT
TGCTCTGGACAGTCCTTCCTGGATGGTGTTGGTGTTGCGGTTGAGACGGG
GGGGTTATCAGCGATGCGTACCGTCGTGGTTGAAGCAAGTACAGCAGCAC
TGTGTTTGTGCTCCGTATATCATCCTCTTGAAGCGGAAGGGCTTACCTTG
ACTGCTCTGTATTGCATTGCATTGCTTTGCTTTGCTTTGCTTTGCTTTGC
TTTGCATTGTATTGCTTTGCATTGCATTGCCCCCACGAGGAACTGCACTG
TCGGCTTGCCTCTTCTCACATTGGTTGGTTGGCAAGCACGGAGGACATGG
ACATGAGGTGCAGGGTATCTATCTGTCGTGCCAACCGGCTGCTATTACGA
AGACCTCGCATCGACAAACCAACACCACTACTCCGGCCAACCCGAGCGAG
TCTGTCGGAGACGCTGGCTGATCGTGGGCTGGTCTATCCACCTCACTCCC
ACCCCATCCTATCCCGCCTATCCGCCTCACTCTTATCCCATCCCACCCCA
TCCTATCCCATCCCATCCCATCTATCCGCCTCACTCGCATCCCATCCTAT
CCCACCCCATCCCATTTATCCGACTCACTCGCATCCCATCCCACCCCACC
CCATCCCATCTATCCGGCTCACTCCCACCCCATCCTATCCCGTCTATCCG
CCTCACTCCTATCCCATCCTATCCCACCCCATCCCATCTATCCGGCTCAC
TCCCATCCCAACCCACCCCACCGACAGTTACATGAAGTCCATCGGCGTTC
TCAAGACCTGCGAGTTCGAGAGCAACTCGCAGAACGCGCGTGCGCTGGAG
GTGATGATCCCGTGCCACAACAACGCGGCCACGTGCTACATCAAGCAAAA
GAACTACGGAGACTCGAGACTCCTCTCGGAAAATGTGAGAGGCAGGGAGG
AAGATAGGAAAGGAAAGACGCGCACGATCGATTCGGTGCTCTGCCTAGTG
GTGGCGTTGTCGCACAACGGTGGTATGTTGTACTCCTAAATATGTAGAAG
TGGCACGAACGGAAAATTGTCCTTGTCTCGACTGCGGGGACTGATGACTT
TTTTTTGTTGCTGTTCCCTTACTTAGTATTGTTTGAACCATGACGACTGC
TTTTCATCGTGATGATGATGCATTGGCCTGCATATGCGAGTGGACAAAAT
GCACCCCGTTTGGTCACCAGCTCTCTTGCTGACCGCGGTGACGTGGGAAG
CGCTAAAATGAAGCCGAATACAGTCAAGAGGGGAGCATTCGCATGTCAAA
GTTAATGTACATAGATAGGAACAGCTTCTTATTGTATAGTACGAACCGAC
GGTATTGAAAATTGCACAGCACTGGAGTCTACTTTTTGCTTTTGGACATC
AAACGCCAACCGCTTGTGTACCGTTTGTGTCCCAAGCCATGCAATCGCGG
TCAGTGTCTTGTCCGAGGGAACAACCTGTGTACTCTTGTAGTGCGTACCT
GGTGTTTGGGCCGTTTTTTCTCGCCCAAATTCCATCCTTTATTCATGCGT
TGATGGTCTGCAAGAAATCGAGAGTGGCGCCCCTACCCCCCACCGAATGT
AGAAGTATTACATATCTATATTTTGTATTTGTCCCTCCCATTATTGGCTC
GTTTGTCGTCTGCTCCACTGGCCCCCGTCCTCCACTACGACTAGCTGGAC
GACCCAACCGGGGCCGGGGGGGGGGTGGACCCCCTCCTGCGGTGCCTGCC
TGCCTGCCATGTTTTTATCGCGAGCGGGGTTCATACGTGTGTATTTTCCC
ACGTATATCTCTCATGTAATCCATCCATCGTCCGAGCAGGTGGACACCCT
CTGCAGCGCGTTGGACCGCAACAGAGGCGGGAAGGTAATGAAGGCTTTGA
AGGAGAGGGGGGTCGGGGAGACGACGATCCTGGGGCAGTGGTGGTGCAAG
GGCCTATTCTTGGGGGGGAAGGCGTGCCTCTACCAGGGGGAGAACGAGGA
AGCCGTCAACTGTCTCCGGAAGGGGAGCAAGGTGCGTGCGGGCGGGCGGG
GTCTGTGCCGTGCTGTTTTTCCAGTGTCAAAAAGGTCAAACCCAACGTGG
ATGGAAGGAAAGGCGGCGCCGGAGGCGCGTGCGCGGCTCAGGCTCAGGGG
GTGCCGTATACGACCTGGCTTCACAGAGGAAACGCGCGTGCGGCTCAGGG
GGTGCCGTATGTGGCCTGGCTTCACACAAGAGAAAACGGCCCCTCTCATT
ACCGGGCCGAGGACTAGAAACGCCCTTTGAAAGTGATATCAGGGGGTATA
TATGTTTATATGTAACGGGCTTTTTCAATAAAGTTCCACAAATGGCACTA
GCGGTTAACTTATGTACATACATACGATCTGCGAAAAATTTGTTGCCACG
GGTTGTTGTAGGTAGGCACCCTACGTAACCCCCTCCCTCGATGTCTCTGA
TTACTGGCAAAATCCACAATCCGTCGCTGGTCGCTTTTTCCATTGGTTAT
TCCGCAGATCTGTCACTTTAACGAGATACAGTAGTAGTACATAGAGGATA
TCTTCCGTAAATATAGATCTGTTATTTTAGCGAGATAGTGTGTATGATAA
CTTTCAAAAATACGATTTTTGGGGTCTATTTCGCGACATTTGGTTGGATT
CGCGGGGAGAGAAGCGGTACAGCCAGCTCGCGAGACGGTTGTATTTAGGG
TTTTAAAACGACGAAATATTAAGTATTTGGATCGGGGATCGAGGCAAAGC
TCCTCAGAAATAGGGGGGGGATGTCGGGCAGGAGAAGGGACCCCTCTGCC
TGACCTAAATACCCCCGTGAGTGTGCGCCATTTCAAGTCACGTGACACCA
CCCCCTGCACCGAGGGAGGGAAGGAAGGAAGGTGTACCGTAGGTGACATA
AGATAAGACACCCCCTGGACCGAGATTGAAAGCTTGGTTACTCCGCAACG
AATACGATTCTAACCACAAACGCCACATTTTCGGACAGCTCTCAACGAAA
TCTTTCCAACGCCGCCCTTTTCGGGACTGACGCTCTGCTTGTTGTGGAGT
ACTTGAGCTTTGAAAATCGGCCCAGGGGGTGTCTTACCTTATGTCACCTA
CGGTAGAGGCTGCCGTCCGCAGAGTCCCACACGAAGTATCGTACGATAAG
CGGAAGACAAATTTAACACGAGTAGACGTCCGTGAATTTTCCAAGTATCC
TGCATATCAACCAACACCAACCCAGGGCCGAGAAGACAGCACCAGCACCA
CACCTGCGTCTTTTTTTACTCGTGTTGCATTACGCATGGCAATTATTTAT
ACACTTTCGATTTCTGTGGGGATAAGTCGTTTGAATCCTCCGTATGTATG
TACCTATGTACGAAGTAGGCGCGTGAGGAGGGGGGTTACTATGTAATTCC
AAACCCAAAACCTGAAACCTCCCTGAAGTAGCGAAAACACCACCATTTTC
GCCTGTCCGCGCGGGGCCCCGCCTTTGATATAGGCATATGTAGCAATGTA
ACCCATTTTGTGTTTGTCTTTTTTACGCTTCCCTCTCGATGGTGGTCGGG
CGATCAATACTCAACCCTGTTTCGACTACCGGTGGTGTCGATAATCATTG
TGGCGGTTTGTTTTATGTGCCTACCACTCTAACCCAACTGTTTTTGTCTT
TTTTACGCTTCCCTCTCGATGGTGGTTGGTCGATCAAAACTCAACACTGT
CGACCGTTGATGGTGGTGCTCACGGGCCCGTGGTGATGGCTGGGGCTATA
ATTGCTGCTGCCGCACCAGCTCGCGAAGCCTGCGGTGCTTGCGAAGCTCC
GCGCGGAGATCAACAACGAGCTGGAGAAGGCGACGAAGCGCTTGGCCAGC
CAGACCAAGAAGGCGCAAAAGATGTGGACAAAGGTAAAACCCACGAACTA
CTCTCTGTTGTGCGTAAATATCGTCGCACACGTGCGTGCGCGGTGTCCGT
CCGCCCCTAGCCTTGTCAACGTTGGCTGGCTGCGCGCGAAATTGTCCACC
TCGCGCCCGTTCTTTAAGCTTTCCCCCTTTTGGCGTTCTTCTTCTGCGTG
TTGCATGCTGTGCGCTGCAATGGCGCAAGAACAGAGCGTGGCTATGTATG
TACTCAGGATGCCAGGATCTCCACCAGGGAGTGGATGCGTTTTTTTTTAT
ATTTTGGCTGGTCGGAGGTACATATAGTACACACCGCTCGCTGGCTGTGT
GTGACGAGCGTATGTATGTAAGGTGAAGGTTGTACCTTCTCCTCGAAGCG
TGCAACTGAAGCGTTTTGATTGACAACCCTACTTTGCCTCGCAGGCTTTT
TCGAAAAACTCTACCGACGCTGCTCCCGAGGACAACACCACGAGCGCTTC
GGCCTCAGCCGCTGGCAAAAGAGCGTTGCCCGCCGCCCCCACGCAACGAA
CGGCGATGAATGGCGGCGGCGGTGGCCCTCACAAGACCGTGCTCGAGCGC
TTGGAAGAATTGACGAAGGTACGCACACGGAGTTGGTGGGCTGGGGGCCA
TGTTTCGGCTGTTTCAGCAAGCAAAGTAGCGAAGGAGACAAGGGATTGTT
GTTGTTGTTGCTGCTGTCTCCACATTAAAAAACGTTCCGATCTCTCTAAT
CATCCAGTACATCGCCGTGATTCCGGATTAATCGGATACTATGCAGCGAT
TCGTACAAAAAAAAACATGGCTGGCGTACATAGCGTGTCAGTTCGGTAAT
TGCGTGTTCGCCCACCCCACCCCTCGGGTCCTTTTGAGCTTGGGGAAGAG
ATTTTCTCTCCCTGGATTAGGCTCAGCAACTTTCACAAGGTTTGGTGCCA
TCCATCGTGTTGACCAAAATACCCACCCGTGTCATTTGTATATACATAAC
ATTTGTTTCCTCTTCTTCCCAGCTTCTTGCATGCCCTTTTTTTTTTCGCC
CATCATTGGCATATTTGTCGTCTGCCCCACCGGCCCCCCCTCCACTACTG
CTAGCTAGACGACCCGGGGTCACACAGGAGGAGGGGTTGGACCCCCTCCT
GCGGTGCATGTGGACATCCCTGGAGGGTGTTTTTTTTGGAATGGCCTGGC
CTGGCTTTTGCTTCTCTCTTCTGAGAGAGTTGGTGGACATCAATGTGAAG
GCGCCGGGCGTCCATTTTTCAACAGAGTCCCTCGTACTTGCTTTGTGCTT
GGATATTTACCCGCAGTATACCTAGCAAAAAAAAAAAAGTAGCACCGCCG
CCGACGTACGTTCATTCCCGTTTCTCGACCTTTCGGCTGTCATTTTTTTC
ACGCTTGCATGAAACACAACCCGTGGTCGTTGTGATCGTGAATCTCGAAC
CAAATTCGAGCCACTGAGCCCCCCCCCCCCCTCCCTCCCCATGATTGGTT
TTGCGGTTGCCGAGAAACAGATGGGAGGCGTTTCGGCAACCCCGGGGGCA
ACAAAGGCGGCCAAGCAAGAAAAGAGCGAAGAGGAAGAGGACGAGTCAGA
GGAGGAGGATTCAGAAGAGGAATACGACGATGAAGGCGACGAACACTCGC
TGTCTGTCGCGTCGAGCGGGCTGTTGTGGGGCTCCATCGCCGTCGGCGCT
GTTGCTGTGTCCGTCGCGGCTCTGCTGGCGTTGGGCAAGAGACGCTGATT
TTTTCGGACCTAAAACAGTATTAATCGGTTTCAAGTTTCTGAAAAAAAGC
TTTTTTTGATCGATGGGAAAGAGACGCAGAGGTTTTCCCATCAACACGGC
TGGGAAGGCGCTGGTTCGGTTAAGGGAGGGTGTGCGCATGTCCTTTTTGT
TTTCGTTGGTGGTATCCAACAACAGTTTAGTACGAGTTTTTCACCAATAT
GGCGGGACAACTCGCCAGCGCTGTTTTATTTAGGTAACCGGCAGTTTCGG
TGGTACATACAACAATCTAAATGTTGCTGTTTTCCCAACGAGTTGCATCG
TGTGTCAGGGCACTTGTTTGGTTTGTTTAGGCGAGCTCTCTGCCAGGGCA
CACACAACGATGGTCGCAGCCGGTGGGTTTTGATGGCCGTGTTGTGCCGT
GCGTTTTACTCTGAGTACCTCGTAGAGGTAAGTCTCCTGTGGCCATTGGT
AAAAAAATTCCGAATGATAATCCCGCCGCGTTTCGGCCCGTTTCTGGAGC
CGCCATTTCCAAATGGTTTCTGGAGCGAAAATCGCAAAAACACGTCCCAA
ACACGCGTTCTTGAGTTTTCTCGCCGGTCACGCTACCAACGGACGTCTAA
TTTCACCGGTAAACGCATGTGGCCCTCAAGTTTTTTTTTGTGCCCCCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1076:455..9852-

>mRNA_L-elsbetiae_contig1076.701.1 ID=mRNA_L-elsbetiae_contig1076.701.1|Name=mRNA_L-elsbetiae_contig1076.701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3048bp|location=Sequence derived from alignment at L-elsbetiae_contig1076:455..9852- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGATGTTGGCAGCACTAGCAGCGGTACCGCGAAGCCGAGGCTAGG
GCCTCGCAGCAAGATCGTTATCCCGGAGGCCTTCACGAAGGCGGCCTCCA
ATGGACGCGCCATTAGCCTCGCTCCCGCTTCGGAACGGACCAGCCAAGAG
AAGGGCTTGCCTCCAGTGGCAGAGCCGGCTGCAGCGGTGGTCGCGGAGGT
AGCAACACCAGCTGTGGCCGTGGAGGCAGCGGTCTCTCCCAAGACGGAAT
CACCAAAGCCAAAGCCAACGTTCGAACCCATCAGCCCCGGATTGAGCAGC
GTCAAGCTTCCGCTAGGGCCTTCACCCAAGAACGAATCGATGGCTGATGT
TGGCAGCACTAGCAGCGGTACCGCGAAGCCGAGGCTAGGGCCTCGCAGCA
AGATCGTTATCCCGGAGGCCTTCACGAAGGCGGCCTCCAATGGACGCGCC
ATTAGCCTCGCTCCCGCTTCGGAACGGACCAGCCAAGAGAAGGGCTTGCC
TCCAGTGGCAGAGCCGGCTGCAGCGGTGGTCGCGGAGGTAGCAACACCAG
CTGTGGCCGTGGAGGCAGCGGTCTCTCCCAAGACGGAATCACCAAAGCCA
AAGCCAACGTTCGAACCCATCAGCCCCGGATTGAGCAGCGTCAAGCTTCC
GCTAGGGCCTTCACCCAAGAACGAATCGCAGGCGCCGCCGGAAGACGTCA
AGCCCAAAGAGGAGCCGCCCCCGGAGGCCAAAGTCGGTGATATCGTGGAG
CTGTTCATGGGCAGAGGACAGGTCCGTGGCGTCCGGGAGGAGGATGGCAT
GCTGGAGGTGTGGGCGATGGGCTGGGAGATGGCGGGGGAGCAGCGGCCTC
GCTTCTTCGTGTCGAGGGGCGCCGTGAAGGTGGTCCCGACCGTGTACTAC
AAGATGCCCGCAGGCGCCGCCGGAAGACGTCAAGCCCAAAGAGGAGCCGC
CCCCGGAGGCCAAAGTCGGTGATATCGTGGAGCTGTTCATGGGCAGAGGA
CAGGTCCGTGGCGTCCGGGAGGAGGATGGCATGCTGGAGGTGTGGGCGAT
GGGCTGGGAGATGGCGGGGGAGCAGCGGCCTCGCTTCTTCGTGTCGAGGG
GCGCCGTGAAGGTGGTCCCGACCGTGTACTACAAGATGCCCGTACTGGAG
CGACTCCAGATCGCGGCGTGGCTGAAGAGCGAGGGGGCGAAACTGTTCAA
GGCCGGCAAGTACGAGAAGGCCGCTCAAAATACTGGAGCGACTCCAGATC
GCGGCGTGGCTGAAGAGCGAGGGGGCGAAACTGTTCAAGGCCGGCAAGTA
CGAGAAGGCCGCTCAAAATTACATGAAGTCCATCGGCGTTCTCAAGACCT
GCGAGTTCGAGAGCAACTCGCAGAACGCGCGTGCGCTGGAGGTGATGATC
CCGTGCCACAACAACGCGGCCACGTGCTACATCAAGCAAAAGAACTACGG
AGACTCGAGACTCCTCTCGGAAAATTTACATGAAGTCCATCGGCGTTCTC
AAGACCTGCGAGTTCGAGAGCAACTCGCAGAACGCGCGTGCGCTGGAGGT
GATGATCCCGTGCCACAACAACGCGGCCACGTGCTACATCAAGCAAAAGA
ACTACGGAGACTCGAGACTCCTCTCGGAAAATGTGGACACCCTCTGCAGC
GCGTTGGACCGCAACAGAGGCGGGAAGGTAATGAAGGCTTTGAAGGAGAG
GGGGGTCGGGGAGACGACGATCCTGGGGCAGTGGTGGTGCAAGGGCCTAT
TCTTGGGGGGGAAGGCGTGCCTCTACCAGGGGGAGAACGAGGAAGCCGTC
AACTGTCTCCGGAAGGGGAGCAAGGTGGACACCCTCTGCAGCGCGTTGGA
CCGCAACAGAGGCGGGAAGGTAATGAAGGCTTTGAAGGAGAGGGGGGTCG
GGGAGACGACGATCCTGGGGCAGTGGTGGTGCAAGGGCCTATTCTTGGGG
GGGAAGGCGTGCCTCTACCAGGGGGAGAACGAGGAAGCCGTCAACTGTCT
CCGGAAGGGGAGCAAGCTCGCGAAGCCTGCGGTGCTTGCGAAGCTCCGCG
CGGAGATCAACAACGAGCTGGAGAAGGCGACGAAGCGCTTGGCCAGCCAG
ACCAAGAAGGCGCAAAAGATGTGGACAAAGCTCGCGAAGCCTGCGGTGCT
TGCGAAGCTCCGCGCGGAGATCAACAACGAGCTGGAGAAGGCGACGAAGC
GCTTGGCCAGCCAGACCAAGAAGGCGCAAAAGATGTGGACAAAGGCTTTT
TCGAAAAACTCTACCGACGCTGCTCCCGAGGACAACACCACGAGCGCTTC
GGCCTCAGCCGCTGGCAAAAGAGCGTTGCCCGCCGCCCCCACGCAACGAA
CGGCGATGAATGGCGGCGGCGGTGGCCCTCACAAGACCGTGCTCGAGCGC
TTGGAAGAATTGACGAAGGCTTTTTCGAAAAACTCTACCGACGCTGCTCC
CGAGGACAACACCACGAGCGCTTCGGCCTCAGCCGCTGGCAAAAGAGCGT
TGCCCGCCGCCCCCACGCAACGAACGGCGATGAATGGCGGCGGCGGTGGC
CCTCACAAGACCGTGCTCGAGCGCTTGGAAGAATTGACGAAGATGGGAGG
CGTTTCGGCAACCCCGGGGGCAACAAAGGCGGCCAAGCAAGAAAAGAGCG
AAGAGGAAGAGGACGAGTCAGAGGAGGAGGATTCAGAAGAGGAATACGAC
GATGAAGGCGACGAACACTCGCTGTCTGTCGCGTCGAGCGGGCTGTTGTG
GGGCTCCATCGCCGTCGGCGCTGTTGCTGTGTCCGTCGCGGCTCTGCTGG
CGTTGGGCAAGAGACGCTGAATGGGAGGCGTTTCGGCAACCCCGGGGGCA
ACAAAGGCGGCCAAGCAAGAAAAGAGCGAAGAGGAAGAGGACGAGTCAGA
GGAGGAGGATTCAGAAGAGGAATACGACGATGAAGGCGACGAACACTCGC
TGTCTGTCGCGTCGAGCGGGCTGTTGTGGGGCTCCATCGCCGTCGGCGCT
GTTGCTGTGTCCGTCGCGGCTCTGCTGGCGTTGGGCAAGAGACGCTGA
back to top