prot_L-elsbetiae_contig1076.701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1076.701.1
Unique Nameprot_L-elsbetiae_contig1076.701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length508
Homology
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BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Match: D8LNS0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS0_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 5.160e-201
Identity = 352/510 (69.02%), Postives = 401/510 (78.63%), Query Frame = 0 
Query:    1 MAD-VGSTSSGTAKPRLGPRSKI-VIPEAFTKAASNGRAISLAPASERTSQEKGLPPVAEPAAAVVAEVATPAVAVEAAVSPKTESPKPKPTFEPISPGLSSVKLPLGPSPKNESQAPPEDVKPKEEPPPEAKVGDIVELFMGRGQVRGVREEDGMLEVWAMGWEMAGEQRPRFFVSRGAVKVVPTVYYKMPVLERLQIAAWLKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQNARALEVMIPCHNNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGETTILGQWWCKGLFLGGKACLYQGENEEAVNCLRKGSKLAKPAVLAKLRAEINNELEKATKRLASQTKKAQKMWTKAFSKNSTDAAPEDNTTSASASAAGKRALPAAPTQRTAMNGGGGGPHKTVLERLEELTKMGGVSATPGATKAA-KQEKXXXXXXXXXXXXXXXXXXXXGDEHSLSVASSGLLWGSIAVGAVAVSVAALLALGKRR 507
            M+D V S+SS    P LGP+SKI ++P+A   +  NG   S+   +  +S   G+  ++ PA A  AEVA  A       + KT+S K    F PISPGLSSVKLPLGPSPK E++    + K +EEPP EAKVGD+VELFMGRGQVRG+R+EDGMLEVWA+GWEMAGEQR RFFV R  VKVVPTVYYKM  LERLQ+AAWLK EGAKLFKAG +EKAA  YMKSIGVLKT EF +N+QNARA+++MIPCHNNAATCYIK+KNYGD+RLL+ENVDTLCSAL+RNR GKVMK LKERGVGETTILGQWWCKGLFLGGKACLYQ ENEEAVN L+KGS+LAKPA LAKLRAEINNELEKATKRLASQTKKAQKMW+KAFSKNSTD APE     A   AA KRALP+ PT+  AM+G  GGP K+V+ERLE L KMG V A P  +K   KQ++      XXXXXXXXXXXXXX    S S+ASSGLLWGS+AVGAVA+SVA L+ALGKRR
Sbjct:    1 MSDNVSSSSSAAGAPELGPQSKIAIVPDASAGSNPNGNGHSVVEKAH-SSPANGVE-ISPPAPAPPAEVAVVA-------ANKTDSSKL--AFNPISPGLSSVKLPLGPSPKEEAKTASPEKKEEEEPPVEAKVGDLVELFMGRGQVRGIRQEDGMLEVWAVGWEMAGEQRARFFVPRETVKVVPTVYYKMNALERLQMAAWLKEEGAKLFKAGDFEKAATKYMKSIGVLKTGEFTTNAQNARAVQLMIPCHNNAATCYIKRKNYGDARLLTENVDTLCSALERNRDGKVMKELKERGVGETTILGQWWCKGLFLGGKACLYQSENEEAVNYLKKGSRLAKPAALAKLRAEINNELEKATKRLASQTKKAQKMWSKAFSKNSTDVAPEQEGVPA---AAEKRALPSMPTR--AMDGRNGGPEKSVVERLEALAKMGVVPAIPEPSKTTPKQDEEQGEEGXXXXXXXXXXXXXXXXXXSGSLASSGLLWGSLAVGAVALSVATLVALGKRR 494
[Close]
BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Match: A0A7S2KRW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRW4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.340e-13
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 0 
Query:  134 DIVELFMGRGQVRGVREE----DGMLEVWAMGWEMAGEQRPRFFVSRGAVK-----------VVPTVYYKMPVLERLQIAAWLKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQN---ARALEVMIPCHNNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGETTILGQWWCKGLFL 313
            D+V   +GRG V  VR      D +  V    W +AG  R R +    +             V     ++M + E+++ A   K E    F  G+Y++A   + +++  ++  +   +S N   A  +E+MI C NNAA+CY+K+K + D++  + N   +  AL+  RG K+   L++ G+ +  + G+W  K + +
Sbjct:   74 DVVIDGVGRGVVEDVRRNSNSGDDIAVVLLNTWRLAGRSRVRIYTPLSSFSKGNHADVTYHVVRKKRLFEMDIFEKIEYAKAKKQEAIPHFVQGRYDEALSLFSEAVHAVRMQQHSPDSSNEMRADLVEIMITCSNNAASCYVKKKEWKDAQQQARNALLIIDALEGKRGMKIHTILRQGGLTDLKMFGEWRIKSMLI 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1076.701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNS0_ECTSI5.160e-20169.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KRW4_9STRA1.340e-1326.26Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 444..466
NoneNo IPR availableCOILSCoilCoilcoord: 347..367
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..482
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 504..507
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 483..503
NoneNo IPR availableTMHMMTMhelixcoord: 482..504
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 192..386
e-value: 7.6E-18
score: 66.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 196..340
IPR039663AIP/AIPL1PANTHERPTHR11242ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATEDcoord: 188..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1076contigL-elsbetiae_contig1076:1105..9719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1076.701.1mRNA_L-elsbetiae_contig1076.701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1076 455..9852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1076.701.1 ID=prot_L-elsbetiae_contig1076.701.1|Name=mRNA_L-elsbetiae_contig1076.701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=508bp
MADVGSTSSGTAKPRLGPRSKIVIPEAFTKAASNGRAISLAPASERTSQE
KGLPPVAEPAAAVVAEVATPAVAVEAAVSPKTESPKPKPTFEPISPGLSS
VKLPLGPSPKNESQAPPEDVKPKEEPPPEAKVGDIVELFMGRGQVRGVRE
EDGMLEVWAMGWEMAGEQRPRFFVSRGAVKVVPTVYYKMPVLERLQIAAW
LKSEGAKLFKAGKYEKAAQNYMKSIGVLKTCEFESNSQNARALEVMIPCH
NNAATCYIKQKNYGDSRLLSENVDTLCSALDRNRGGKVMKALKERGVGET
TILGQWWCKGLFLGGKACLYQGENEEAVNCLRKGSKLAKPAVLAKLRAEI
NNELEKATKRLASQTKKAQKMWTKAFSKNSTDAAPEDNTTSASASAAGKR
ALPAAPTQRTAMNGGGGGPHKTVLERLEELTKMGGVSATPGATKAAKQEK
SEEEEDESEEEDSEEEYDDEGDEHSLSVASSGLLWGSIAVGAVAVSVAAL
LALGKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039663AIP/AIPL1